EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNGAG00000010458 (Gene tree)
Gene ID
103748400
Gene Symbol
Pabpc1l
Alias
1810053B01Rik|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Nannospalax_galili
Status
putative
Strand
Plus strand
Length
22492 bases
Position
chrKL204115.1:3636385-3658876
Accession
103748400
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNGAP00000007155PABPPF00658.183.8e-2311
ENSNGAP00000007155RRM_5PF13893.63.1e-1312
ENSNGAP00000007155RRM_5PF13893.63.1e-1322
ENSNGAP00000007155RRM_1PF00076.222.9e-9114
ENSNGAP00000007155RRM_1PF00076.222.9e-9124
ENSNGAP00000007155RRM_1PF00076.222.9e-9134
ENSNGAP00000007155RRM_1PF00076.222.9e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNGAT00000012633-1830XM_008851029ENSNGAP00000007155609 (aa)XP_008849251UPI0004ED0D4A
Gene Model
Click here to download ENSNGAG00000010458's gene model file
Pathways
Pathway IDPathway NameSource
ngi03013RNA transportKEGG
ngi03015mRNA surveillance pathwayKEGG
ngi03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000010458's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNGAG00000010458Pabpc1l6135.294ENSNGAG00000021612Celf36732.110
ENSNGAG00000010458Pabpc1l6161.773ENSNGAG00000001502Pabpc4l9861.773
ENSNGAG00000010458Pabpc1l9960.806ENSNGAG00000018292Pabpc49860.510
ENSNGAG00000010458Pabpc1l5630.864ENSNGAG00000008883Hnrnpa05231.613
ENSNGAG00000010458Pabpc1l9955.766ENSNGAG00000016040Pabpc29855.924
ENSNGAG00000010458Pabpc1l9957.911ENSNGAG00000000987Pabpc69857.911
ENSNGAG00000010458Pabpc1l9949.050ENSNGAG00000023773-9848.448
ENSNGAG00000010458Pabpc1l6233.735ENSNGAG00000023123Elavl48933.735
ENSNGAG00000010458Pabpc1l6035.632ENSNGAG00000016337Sf3b45435.593
ENSNGAG00000010458Pabpc1l5241.772ENSNGAG00000012951Rbm36141.772
ENSNGAG00000010458Pabpc1l9956.678ENSNGAG00000023820-9757.143
ENSNGAG00000010458Pabpc1l6230.526ENSNGAG00000019590Elavl19830.526
ENSNGAG00000010458Pabpc1l6069.101ENSNGAG00000012688-9964.467
ENSNGAG00000010458Pabpc1l6434.940ENSNGAG00000014535Elavl28934.940
ENSNGAG00000010458Pabpc1l6156.338ENSNGAG00000004371Pabpc59956.338
ENSNGAG00000010458Pabpc1l10062.875ENSNGAG00000000996Pabpc19962.875
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNGAG00000010458Pabpc1l9979.417ENSG00000101104PABPC1L9987.654Homo_sapiens
ENSNGAG00000010458Pabpc1l9861.844ENSAPOG00000010842pabpc1l9961.746Acanthochromis_polyacanthus
ENSNGAG00000010458Pabpc1l9969.538ENSAMEG00000004099PABPC1L10070.607Ailuropoda_melanoleuca
ENSNGAG00000010458Pabpc1l9965.179ENSACIG00000021004-9965.179Amphilophus_citrinellus
ENSNGAG00000010458Pabpc1l9962.166ENSAOCG00000006167-9962.166Amphiprion_ocellaris
ENSNGAG00000010458Pabpc1l9963.535ENSAPEG00000010558-9876.238Amphiprion_percula
ENSNGAG00000010458Pabpc1l9963.680ENSATEG00000007428pabpc1l9963.680Anabas_testudineus
ENSNGAG00000010458Pabpc1l9967.042ENSAPLG00000008415PABPC1L9867.042Anas_platyrhynchos
ENSNGAG00000010458Pabpc1l9966.986ENSACAG00000011841PABPC1L9866.986Anolis_carolinensis
ENSNGAG00000010458Pabpc1l9978.444ENSANAG00000026826PABPC1L9978.444Aotus_nancymaae
ENSNGAG00000010458Pabpc1l9961.551ENSACLG00000024791pabpc1l9961.551Astatotilapia_calliptera
ENSNGAG00000010458Pabpc1l9963.968ENSAMXG00000013552pabpc1l9963.968Astyanax_mexicanus
ENSNGAG00000010458Pabpc1l5989.881ENSBTAG00000055300-10089.881Bos_taurus
ENSNGAG00000010458Pabpc1l6768.905ENSBTAG00000016849PABPC1L8768.905Bos_taurus
ENSNGAG00000010458Pabpc1l6071.264ENSCJAG00000038506-10071.264Callithrix_jacchus
ENSNGAG00000010458Pabpc1l9978.768ENSCJAG00000017628PABPC1L9978.768Callithrix_jacchus
ENSNGAG00000010458Pabpc1l9968.576ENSCAFG00000009573PABPC1L10068.576Canis_familiaris
ENSNGAG00000010458Pabpc1l9978.758ENSCAFG00020013828PABPC1L9978.758Canis_lupus_dingo
ENSNGAG00000010458Pabpc1l9975.365ENSCHIG00000025759PABPC1L8777.043Capra_hircus
ENSNGAG00000010458Pabpc1l9978.105ENSTSYG00000006645PABPC1L9978.105Carlito_syrichta
ENSNGAG00000010458Pabpc1l9977.654ENSCAPG00000014519PABPC1L9977.654Cavia_aperea
ENSNGAG00000010458Pabpc1l9979.126ENSCPOG00000013633PABPC1L9979.126Cavia_porcellus
ENSNGAG00000010458Pabpc1l10078.191ENSCCAG00000023338PABPC1L10078.191Cebus_capucinus
ENSNGAG00000010458Pabpc1l9979.903ENSCATG00000034065PABPC1L9979.903Cercocebus_atys
ENSNGAG00000010458Pabpc1l9978.641ENSCLAG00000005298PABPC1L9979.773Chinchilla_lanigera
ENSNGAG00000010458Pabpc1l9980.065ENSCSAG00000014242PABPC1L9980.065Chlorocebus_sabaeus
ENSNGAG00000010458Pabpc1l7275.113ENSCPBG00000017755-9975.113Chrysemys_picta_bellii
ENSNGAG00000010458Pabpc1l5474.242ENSCPBG00000007810-8174.242Chrysemys_picta_bellii
ENSNGAG00000010458Pabpc1l9747.454ENSCING00000002796-9747.959Ciona_intestinalis
ENSNGAG00000010458Pabpc1l9755.034ENSCSAVG00000003102-10078.082Ciona_savignyi
ENSNGAG00000010458Pabpc1l9856.683ENSCSAVG00000004246-9856.140Ciona_savignyi
ENSNGAG00000010458Pabpc1l9975.399ENSCANG00000037530PABPC1L9975.399Colobus_angolensis_palliatus
ENSNGAG00000010458Pabpc1l10088.506ENSCGRG00001021938Pabpc1l10088.506Cricetulus_griseus_chok1gshd
ENSNGAG00000010458Pabpc1l10088.506ENSCGRG00000007946Pabpc1l10088.506Cricetulus_griseus_crigri
ENSNGAG00000010458Pabpc1l9959.836ENSCSEG00000021295pabpc1l9960.033Cynoglossus_semilaevis
ENSNGAG00000010458Pabpc1l9964.065ENSCVAG00000015943-8780.303Cyprinodon_variegatus
ENSNGAG00000010458Pabpc1l9964.217ENSDARG00000002597pabpc1l8881.538Danio_rerio
ENSNGAG00000010458Pabpc1l9980.065ENSDNOG00000048450PABPC1L9980.065Dasypus_novemcinctus
ENSNGAG00000010458Pabpc1l10080.614ENSDORG00000001067Pabpc1l10080.614Dipodomys_ordii
ENSNGAG00000010458Pabpc1l9684.959ENSETEG00000009969PABPC1L7284.959Echinops_telfairi
ENSNGAG00000010458Pabpc1l6088.095ENSEASG00005023408-10088.095Equus_asinus_asinus
ENSNGAG00000010458Pabpc1l5474.093ENSEASG00005023407-7774.093Equus_asinus_asinus
ENSNGAG00000010458Pabpc1l6777.253ENSECAG00000040139-8377.253Equus_caballus
ENSNGAG00000010458Pabpc1l9975.980ENSEEUG00000005978PABPC1L9975.980Erinaceus_europaeus
ENSNGAG00000010458Pabpc1l9963.507ENSELUG00000001811pabpc1l9963.507Esox_lucius
ENSNGAG00000010458Pabpc1l9978.922ENSFCAG00000011692PABPC1L9978.922Felis_catus
ENSNGAG00000010458Pabpc1l7971.660ENSFALG00000005372PABPC1L8371.660Ficedula_albicollis
ENSNGAG00000010458Pabpc1l10076.823ENSFDAG00000008291PABPC1L10076.823Fukomys_damarensis
ENSNGAG00000010458Pabpc1l9963.033ENSFHEG00000003398pabpc1l9963.033Fundulus_heteroclitus
ENSNGAG00000010458Pabpc1l9963.548ENSGMOG00000004437pabpc1l9863.548Gadus_morhua
ENSNGAG00000010458Pabpc1l8674.580ENSGALG00000004123PABPC1L9976.978Gallus_gallus
ENSNGAG00000010458Pabpc1l9960.123ENSGAFG00000021057pabpc1l9960.123Gambusia_affinis
ENSNGAG00000010458Pabpc1l9961.746ENSGACG00000002792pabpc1l9961.746Gasterosteus_aculeatus
ENSNGAG00000010458Pabpc1l9968.146ENSGAGG00000000589PABPC1L9873.423Gopherus_agassizii
ENSNGAG00000010458Pabpc1l9979.579ENSGGOG00000004584PABPC1L9979.579Gorilla_gorilla
ENSNGAG00000010458Pabpc1l9961.392ENSHBUG00000006134pabpc1l9961.392Haplochromis_burtoni
ENSNGAG00000010458Pabpc1l9980.097ENSHGLG00000008434PABPC1L9980.097Heterocephalus_glaber_female
ENSNGAG00000010458Pabpc1l9980.097ENSHGLG00100012151PABPC1L9980.097Heterocephalus_glaber_male
ENSNGAG00000010458Pabpc1l6175.281ENSHGLG00100019506-10075.281Heterocephalus_glaber_male
ENSNGAG00000010458Pabpc1l9961.614ENSHCOG00000009270pabpc1l9962.706Hippocampus_comes
ENSNGAG00000010458Pabpc1l6053.266ENSIPUG00000006780-8558.046Ictalurus_punctatus
ENSNGAG00000010458Pabpc1l6057.471ENSIPUG00000006760-8857.471Ictalurus_punctatus
ENSNGAG00000010458Pabpc1l9963.492ENSIPUG00000012602pabpc1l9963.492Ictalurus_punctatus
ENSNGAG00000010458Pabpc1l5263.636ENSIPUG00000005537-9863.636Ictalurus_punctatus
ENSNGAG00000010458Pabpc1l9979.579ENSSTOG00000003739PABPC1L9979.579Ictidomys_tridecemlineatus
ENSNGAG00000010458Pabpc1l9977.941ENSJJAG00000022406Pabpc1l9975.574Jaculus_jaculus
ENSNGAG00000010458Pabpc1l9962.240ENSKMAG00000016847pabpc1l9962.240Kryptolebias_marmoratus
ENSNGAG00000010458Pabpc1l9961.912ENSLBEG00000010084pabpc1l9962.063Labrus_bergylta
ENSNGAG00000010458Pabpc1l9963.349ENSLACG00000005762PABPC1L9965.688Latimeria_chalumnae
ENSNGAG00000010458Pabpc1l9964.848ENSLOCG00000007519pabpc1l9864.848Lepisosteus_oculatus
ENSNGAG00000010458Pabpc1l9977.671ENSLAFG00000003553PABPC1L10077.671Loxodonta_africana
ENSNGAG00000010458Pabpc1l9980.065ENSMFAG00000040365PABPC1L9980.065Macaca_fascicularis
ENSNGAG00000010458Pabpc1l9978.387ENSMNEG00000032298PABPC1L9978.387Macaca_nemestrina
ENSNGAG00000010458Pabpc1l9979.903ENSMLEG00000043139PABPC1L9979.903Mandrillus_leucophaeus
ENSNGAG00000010458Pabpc1l9762.338ENSMAMG00000011854pabpc1l9362.331Mastacembelus_armatus
ENSNGAG00000010458Pabpc1l9961.551ENSMZEG00005023713pabpc1l9961.551Maylandia_zebra
ENSNGAG00000010458Pabpc1l9968.371ENSMGAG00000003674PABPC1L9868.371Meleagris_gallopavo
ENSNGAG00000010458Pabpc1l10086.371ENSMOCG00000013186Pabpc1l10086.371Microtus_ochrogaster
ENSNGAG00000010458Pabpc1l9961.844ENSMMOG00000020574-9080.000Mola_mola
ENSNGAG00000010458Pabpc1l9772.712ENSMODG00000016198PABPC1L9672.664Monodelphis_domestica
ENSNGAG00000010458Pabpc1l9761.576ENSMALG00000021622pabpc1l10061.576Monopterus_albus
ENSNGAG00000010458Pabpc1l9988.099MGP_CAROLIEiJ_G0024627Pabpc1l9988.099Mus_caroli
ENSNGAG00000010458Pabpc1l9987.769ENSMUSG00000054582Pabpc1l9987.769Mus_musculus
ENSNGAG00000010458Pabpc1l9988.119MGP_PahariEiJ_G0026071Pabpc1l9988.119Mus_pahari
ENSNGAG00000010458Pabpc1l9987.934MGP_SPRETEiJ_G0025549Pabpc1l9987.934Mus_spretus
ENSNGAG00000010458Pabpc1l9976.490ENSMPUG00000017646PABPC1L9976.490Mustela_putorius_furo
ENSNGAG00000010458Pabpc1l9872.903ENSMLUG00000006324PABPC1L9772.903Myotis_lucifugus
ENSNGAG00000010458Pabpc1l9964.680ENSNBRG00000016633pabpc1l9964.680Neolamprologus_brichardi
ENSNGAG00000010458Pabpc1l9963.383ENSMEUG00000007905-9963.383Notamacropus_eugenii
ENSNGAG00000010458Pabpc1l10077.419ENSOPRG00000011846PABPC1L10077.419Ochotona_princeps
ENSNGAG00000010458Pabpc1l5772.185ENSODEG00000002920-9172.185Octodon_degus
ENSNGAG00000010458Pabpc1l10070.759ENSODEG00000015482PABPC1L10070.759Octodon_degus
ENSNGAG00000010458Pabpc1l9961.551ENSONIG00000017314pabpc1l9961.551Oreochromis_niloticus
ENSNGAG00000010458Pabpc1l8961.290ENSOANG00000015793-10061.290Ornithorhynchus_anatinus
ENSNGAG00000010458Pabpc1l9972.546ENSOCUG00000003005PABPC1L9972.546Oryctolagus_cuniculus
ENSNGAG00000010458Pabpc1l9767.285ENSORLG00000010322pabpc1l9962.540Oryzias_latipes
ENSNGAG00000010458Pabpc1l9767.285ENSORLG00020021193pabpc1l9962.379Oryzias_latipes_hni
ENSNGAG00000010458Pabpc1l9767.285ENSORLG00015017018pabpc1l9962.480Oryzias_latipes_hsok
ENSNGAG00000010458Pabpc1l9958.788ENSOMEG00000010789pabpc1l9958.788Oryzias_melastigma
ENSNGAG00000010458Pabpc1l9977.316ENSOGAG00000032999PABPC1L9977.193Otolemur_garnettii
ENSNGAG00000010458Pabpc1l9977.435ENSOARG00000004578PABPC1L9977.435Ovis_aries
ENSNGAG00000010458Pabpc1l9979.254ENSPPAG00000039677PABPC1L9979.254Pan_paniscus
ENSNGAG00000010458Pabpc1l6375.309ENSPPRG00000019327-9875.309Panthera_pardus
ENSNGAG00000010458Pabpc1l9879.208ENSPTIG00000006524PABPC1L9979.208Panthera_tigris_altaica
ENSNGAG00000010458Pabpc1l6387.346ENSPTRG00000013531PABPC1L9987.346Pan_troglodytes
ENSNGAG00000010458Pabpc1l9979.903ENSPANG00000018788PABPC1L9979.903Papio_anubis
ENSNGAG00000010458Pabpc1l5476.336ENSPKIG00000016810-9376.336Paramormyrops_kingsleyae
ENSNGAG00000010458Pabpc1l9965.224ENSPKIG00000007322pabpc1l9965.224Paramormyrops_kingsleyae
ENSNGAG00000010458Pabpc1l6776.499ENSPSIG00000013289PABPC1L9976.499Pelodiscus_sinensis
ENSNGAG00000010458Pabpc1l7064.249ENSPMGG00000023121-9064.249Periophthalmus_magnuspinnatus
ENSNGAG00000010458Pabpc1l6273.023ENSPMGG00000023117pabpc1l9773.023Periophthalmus_magnuspinnatus
ENSNGAG00000010458Pabpc1l9987.789ENSPEMG00000020671Pabpc1l9987.789Peromyscus_maniculatus_bairdii
ENSNGAG00000010458Pabpc1l9963.785ENSPFOG00000013241pabpc1l9963.226Poecilia_formosa
ENSNGAG00000010458Pabpc1l5380.000ENSPLAG00000023686-9280.000Poecilia_latipinna
ENSNGAG00000010458Pabpc1l9963.226ENSPLAG00000017490-9963.226Poecilia_latipinna
ENSNGAG00000010458Pabpc1l9963.107ENSPMEG00000007677pabpc1l9963.107Poecilia_mexicana
ENSNGAG00000010458Pabpc1l5380.000ENSPMEG00000009185-8880.000Poecilia_mexicana
ENSNGAG00000010458Pabpc1l6773.123ENSPREG00000015886pabpc1l9973.123Poecilia_reticulata
ENSNGAG00000010458Pabpc1l10079.483ENSPPYG00000011042PABPC1L10079.483Pongo_abelii
ENSNGAG00000010458Pabpc1l6382.812ENSPCAG00000011787-7582.812Procavia_capensis
ENSNGAG00000010458Pabpc1l9978.758ENSPCOG00000020630PABPC1L9978.758Propithecus_coquereli
ENSNGAG00000010458Pabpc1l9977.778ENSPVAG00000012663PABPC1L9977.778Pteropus_vampyrus
ENSNGAG00000010458Pabpc1l9964.680ENSPNYG00000004101pabpc1l9964.680Pundamilia_nyererei
ENSNGAG00000010458Pabpc1l9957.484ENSPNAG00000021248pabpc1l9957.484Pygocentrus_nattereri
ENSNGAG00000010458Pabpc1l9988.303ENSRNOG00000012750Pabpc1l10088.303Rattus_norvegicus
ENSNGAG00000010458Pabpc1l9979.579ENSRBIG00000035381PABPC1L9979.579Rhinopithecus_bieti
ENSNGAG00000010458Pabpc1l9979.417ENSRROG00000044498PABPC1L9979.417Rhinopithecus_roxellana
ENSNGAG00000010458Pabpc1l9978.444ENSSBOG00000009532-9978.444Saimiri_boliviensis_boliviensis
ENSNGAG00000010458Pabpc1l9866.939ENSSHAG00000011446PABPC1L10066.939Sarcophilus_harrisii
ENSNGAG00000010458Pabpc1l9964.904ENSSFOG00015017304pabpc1l9964.904Scleropages_formosus
ENSNGAG00000010458Pabpc1l9962.701ENSSMAG00000010516pabpc1l9779.845Scophthalmus_maximus
ENSNGAG00000010458Pabpc1l9962.679ENSSDUG00000014743pabpc1l9962.300Seriola_dumerili
ENSNGAG00000010458Pabpc1l9968.825ENSSLDG00000006981pabpc1l9871.689Seriola_lalandi_dorsalis
ENSNGAG00000010458Pabpc1l9966.139ENSSPUG00000004233PABPC1L9866.139Sphenodon_punctatus
ENSNGAG00000010458Pabpc1l9961.056ENSSPAG00000017137pabpc1l9961.056Stegastes_partitus
ENSNGAG00000010458Pabpc1l9976.471ENSSSCG00000007382PABPC1L9976.471Sus_scrofa
ENSNGAG00000010458Pabpc1l9966.250ENSTGUG00000005114PABPC1L9966.250Taeniopygia_guttata
ENSNGAG00000010458Pabpc1l9762.621ENSTRUG00000011085pabpc1l9462.689Takifugu_rubripes
ENSNGAG00000010458Pabpc1l9960.630ENSTNIG00000017903pabpc1l9861.111Tetraodon_nigroviridis
ENSNGAG00000010458Pabpc1l9688.014ENSTBEG00000002851PABPC1L8088.014Tupaia_belangeri
ENSNGAG00000010458Pabpc1l9476.592ENSTTRG00000007618PABPC1L9676.870Tursiops_truncatus
ENSNGAG00000010458Pabpc1l9975.817ENSUAMG00000017682PABPC1L9975.817Ursus_americanus
ENSNGAG00000010458Pabpc1l6785.352ENSUMAG00000025436PABPC1L9185.352Ursus_maritimus
ENSNGAG00000010458Pabpc1l9986.166ENSVVUG00000018939PABPC1L9886.166Vulpes_vulpes
ENSNGAG00000010458Pabpc1l9962.179ENSXETG00000022831pabpc1l9862.179Xenopus_tropicalis
ENSNGAG00000010458Pabpc1l9969.565ENSXCOG00000005459pabpc1l9976.596Xiphophorus_couchianus
ENSNGAG00000010458Pabpc1l9963.387ENSXMAG00000017135pabpc1l9963.387Xiphophorus_maculatus

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