EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000010540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 822 bases
Position: chrKL198886.1:1073801-1074622
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000007230	RNA_pol_A_bac	PF01000.26	1.5e-19	1	1
ENSNGAP00000007230	RNA_pol_L	PF01193.24	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000012712	-	693	-	ENSNGAP00000007230	230 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000010540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000010540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000010540	-	100	74.909	ENSNGAG00000012249	-	100	74.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000010540	-	100	74.545	ENSG00000102978	POLR2C	100	74.545	Homo_sapiens
ENSNGAG00000010540	-	100	66.909	ENSAPOG00000011708	polr2c	100	66.909	Acanthochromis_polyacanthus
ENSNGAG00000010540	-	100	74.909	ENSAMEG00000017026	POLR2C	100	74.909	Ailuropoda_melanoleuca
ENSNGAG00000010540	-	100	67.273	ENSACIG00000012060	polr2c	100	67.273	Amphilophus_citrinellus
ENSNGAG00000010540	-	100	66.909	ENSAOCG00000015665	polr2c	100	66.909	Amphiprion_ocellaris
ENSNGAG00000010540	-	91	67.339	ENSAOCG00000018000	-	94	67.339	Amphiprion_ocellaris
ENSNGAG00000010540	-	100	66.909	ENSAOCG00000010477	-	100	66.909	Amphiprion_ocellaris
ENSNGAG00000010540	-	100	66.909	ENSAPEG00000007221	polr2c	100	66.909	Amphiprion_percula
ENSNGAG00000010540	-	100	66.909	ENSATEG00000007143	polr2c	100	66.909	Anabas_testudineus
ENSNGAG00000010540	-	92	72.908	ENSAPLG00000005385	POLR2C	91	72.908	Anas_platyrhynchos
ENSNGAG00000010540	-	100	73.091	ENSACAG00000007514	-	100	73.091	Anolis_carolinensis
ENSNGAG00000010540	-	82	61.429	ENSACAG00000011302	-	97	61.429	Anolis_carolinensis
ENSNGAG00000010540	-	100	74.545	ENSANAG00000005302	POLR2C	100	74.545	Aotus_nancymaae
ENSNGAG00000010540	-	100	67.273	ENSACLG00000004854	polr2c	100	67.273	Astatotilapia_calliptera
ENSNGAG00000010540	-	100	65.818	ENSAMXG00000012805	polr2c	100	67.636	Astyanax_mexicanus
ENSNGAG00000010540	-	100	74.909	ENSBTAG00000001856	POLR2C	100	74.909	Bos_taurus
ENSNGAG00000010540	-	97	42.806	WBGene00007971	rpb-3	98	42.806	Caenorhabditis_elegans
ENSNGAG00000010540	-	100	74.545	ENSCJAG00000012016	POLR2C	100	74.545	Callithrix_jacchus
ENSNGAG00000010540	-	100	74.909	ENSCAFG00000008720	POLR2C	100	74.909	Canis_familiaris
ENSNGAG00000010540	-	100	74.909	ENSCAFG00020007660	POLR2C	100	74.909	Canis_lupus_dingo
ENSNGAG00000010540	-	100	74.909	ENSCHIG00000012072	POLR2C	100	74.909	Capra_hircus
ENSNGAG00000010540	-	100	73.091	ENSTSYG00000011076	POLR2C	100	73.091	Carlito_syrichta
ENSNGAG00000010540	-	66	72.105	ENSCAPG00000006608	POLR2C	82	72.105	Cavia_aperea
ENSNGAG00000010540	-	100	74.909	ENSCPOG00000004554	POLR2C	100	74.909	Cavia_porcellus
ENSNGAG00000010540	-	100	74.545	ENSCCAG00000035768	POLR2C	100	74.545	Cebus_capucinus
ENSNGAG00000010540	-	66	30.366	ENSCCAG00000020169	POLR1C	54	30.366	Cebus_capucinus
ENSNGAG00000010540	-	100	74.545	ENSCATG00000040803	POLR2C	100	74.545	Cercocebus_atys
ENSNGAG00000010540	-	100	74.909	ENSCLAG00000013676	POLR2C	100	74.909	Chinchilla_lanigera
ENSNGAG00000010540	-	100	74.545	ENSCSAG00000004901	POLR2C	100	74.545	Chlorocebus_sabaeus
ENSNGAG00000010540	-	92	72.510	ENSCHOG00000002986	POLR2C	93	72.510	Choloepus_hoffmanni
ENSNGAG00000010540	-	90	74.797	ENSCPBG00000022758	POLR2C	93	74.797	Chrysemys_picta_bellii
ENSNGAG00000010540	-	54	54.967	ENSCING00000009812	-	100	54.967	Ciona_intestinalis
ENSNGAG00000010540	-	93	45.936	ENSCING00000021895	-	99	45.936	Ciona_intestinalis
ENSNGAG00000010540	-	100	50.181	ENSCSAVG00000002167	-	98	54.310	Ciona_savignyi
ENSNGAG00000010540	-	100	74.545	ENSCANG00000034876	POLR2C	100	74.545	Colobus_angolensis_palliatus
ENSNGAG00000010540	-	100	74.545	ENSCGRG00001019477	Polr2c	100	74.545	Cricetulus_griseus_chok1gshd
ENSNGAG00000010540	-	100	74.545	ENSCGRG00000013273	Polr2c	100	74.545	Cricetulus_griseus_crigri
ENSNGAG00000010540	-	100	66.909	ENSCSEG00000001719	polr2c	100	66.909	Cynoglossus_semilaevis
ENSNGAG00000010540	-	77	69.951	ENSCVAG00000017931	polr2c	82	69.951	Cyprinodon_variegatus
ENSNGAG00000010540	-	100	66.909	ENSCVAG00000004718	-	100	66.909	Cyprinodon_variegatus
ENSNGAG00000010540	-	100	67.273	ENSDARG00000033596	polr2c	100	67.273	Danio_rerio
ENSNGAG00000010540	-	100	74.545	ENSDNOG00000030752	-	81	74.545	Dasypus_novemcinctus
ENSNGAG00000010540	-	92	52.743	ENSDNOG00000036028	-	96	52.743	Dasypus_novemcinctus
ENSNGAG00000010540	-	100	74.909	ENSDORG00000000081	Polr2c	100	74.909	Dipodomys_ordii
ENSNGAG00000010540	-	99	51.273	FBgn0026373	RpII33	100	51.273	Drosophila_melanogaster
ENSNGAG00000010540	-	100	58.182	ENSETEG00000004185	POLR2C	100	58.182	Echinops_telfairi
ENSNGAG00000010540	-	100	58.736	ENSEBUG00000016262	polr2c	100	58.736	Eptatretus_burgeri
ENSNGAG00000010540	-	100	75.273	ENSEASG00005005406	POLR2C	100	75.273	Equus_asinus_asinus
ENSNGAG00000010540	-	100	74.909	ENSECAG00000015818	POLR2C	100	74.909	Equus_caballus
ENSNGAG00000010540	-	80	76.331	ENSEEUG00000003658	POLR2C	100	59.636	Erinaceus_europaeus
ENSNGAG00000010540	-	100	64.364	ENSELUG00000012259	polr2c	100	64.364	Esox_lucius
ENSNGAG00000010540	-	100	74.909	ENSFCAG00000034622	POLR2C	100	74.909	Felis_catus
ENSNGAG00000010540	-	100	72.727	ENSFALG00000006931	POLR2C	100	72.727	Ficedula_albicollis
ENSNGAG00000010540	-	100	74.721	ENSFDAG00000008641	POLR2C	100	74.721	Fukomys_damarensis
ENSNGAG00000010540	-	100	66.909	ENSFHEG00000020739	polr2c	100	66.909	Fundulus_heteroclitus
ENSNGAG00000010540	-	100	66.182	ENSGMOG00000004203	polr2c	100	66.182	Gadus_morhua
ENSNGAG00000010540	-	100	72.364	ENSGALG00000001168	POLR2C	100	72.364	Gallus_gallus
ENSNGAG00000010540	-	100	66.909	ENSGAFG00000021951	polr2c	100	66.909	Gambusia_affinis
ENSNGAG00000010540	-	100	65.818	ENSGACG00000002194	polr2c	100	65.818	Gasterosteus_aculeatus
ENSNGAG00000010540	-	90	74.797	ENSGAGG00000016942	POLR2C	88	74.797	Gopherus_agassizii
ENSNGAG00000010540	-	100	74.545	ENSGGOG00000012415	POLR2C	100	74.545	Gorilla_gorilla
ENSNGAG00000010540	-	100	67.273	ENSHBUG00000023040	polr2c	100	67.273	Haplochromis_burtoni
ENSNGAG00000010540	-	100	74.909	ENSHGLG00000013465	POLR2C	100	74.909	Heterocephalus_glaber_female
ENSNGAG00000010540	-	100	74.909	ENSHGLG00100011949	POLR2C	100	74.909	Heterocephalus_glaber_male
ENSNGAG00000010540	-	73	30.542	ENSHCOG00000002179	polr1c	57	30.542	Hippocampus_comes
ENSNGAG00000010540	-	100	64.000	ENSHCOG00000007066	polr2c	100	64.000	Hippocampus_comes
ENSNGAG00000010540	-	100	66.182	ENSIPUG00000009231	polr2c	100	68.000	Ictalurus_punctatus
ENSNGAG00000010540	-	100	67.286	ENSSTOG00000031354	-	100	67.286	Ictidomys_tridecemlineatus
ENSNGAG00000010540	-	100	74.909	ENSSTOG00000015150	-	100	74.909	Ictidomys_tridecemlineatus
ENSNGAG00000010540	-	100	74.545	ENSJJAG00000023057	Polr2c	100	74.545	Jaculus_jaculus
ENSNGAG00000010540	-	100	67.273	ENSKMAG00000016196	polr2c	100	67.273	Kryptolebias_marmoratus
ENSNGAG00000010540	-	100	65.818	ENSLBEG00000007369	polr2c	100	65.818	Labrus_bergylta
ENSNGAG00000010540	-	100	90.476	ENSLACG00000003703	POLR2C	80	90.476	Latimeria_chalumnae
ENSNGAG00000010540	-	100	68.727	ENSLOCG00000003215	polr2c	100	68.727	Lepisosteus_oculatus
ENSNGAG00000010540	-	100	73.455	ENSLAFG00000027230	POLR2C	100	73.455	Loxodonta_africana
ENSNGAG00000010540	-	100	74.545	ENSMFAG00000016861	POLR2C	100	74.545	Macaca_fascicularis
ENSNGAG00000010540	-	100	74.545	ENSMMUG00000020474	POLR2C	100	74.545	Macaca_mulatta
ENSNGAG00000010540	-	100	74.545	ENSMNEG00000033565	POLR2C	100	74.545	Macaca_nemestrina
ENSNGAG00000010540	-	100	74.545	ENSMLEG00000032412	POLR2C	100	74.545	Mandrillus_leucophaeus
ENSNGAG00000010540	-	100	66.909	ENSMAMG00000013205	polr2c	100	66.909	Mastacembelus_armatus
ENSNGAG00000010540	-	100	67.273	ENSMZEG00005015329	polr2c	100	67.273	Maylandia_zebra
ENSNGAG00000010540	-	100	70.522	ENSMAUG00000000779	-	100	70.522	Mesocricetus_auratus
ENSNGAG00000010540	-	97	68.548	ENSMAUG00000019031	-	100	68.548	Mesocricetus_auratus
ENSNGAG00000010540	-	100	73.818	ENSMICG00000045178	POLR2C	100	73.818	Microcebus_murinus
ENSNGAG00000010540	-	100	72.364	ENSMOCG00000013652	Polr2c	100	72.364	Microtus_ochrogaster
ENSNGAG00000010540	-	100	66.545	ENSMMOG00000010560	polr2c	100	66.545	Mola_mola
ENSNGAG00000010540	-	100	73.091	ENSMODG00000013540	POLR2C	100	73.091	Monodelphis_domestica
ENSNGAG00000010540	-	100	66.909	ENSMALG00000004581	polr2c	100	66.909	Monopterus_albus
ENSNGAG00000010540	-	100	74.545	MGP_CAROLIEiJ_G0031409	Polr2c	100	74.545	Mus_caroli
ENSNGAG00000010540	-	100	74.545	ENSMUSG00000031783	Polr2c	100	74.545	Mus_musculus
ENSNGAG00000010540	-	100	74.545	MGP_PahariEiJ_G0023007	Polr2c	100	74.545	Mus_pahari
ENSNGAG00000010540	-	100	74.545	MGP_SPRETEiJ_G0032528	Polr2c	100	74.545	Mus_spretus
ENSNGAG00000010540	-	100	74.909	ENSMPUG00000004483	POLR2C	100	74.909	Mustela_putorius_furo
ENSNGAG00000010540	-	100	74.545	ENSMLUG00000025422	-	100	74.545	Myotis_lucifugus
ENSNGAG00000010540	-	100	74.545	ENSMLUG00000015833	-	100	74.545	Myotis_lucifugus
ENSNGAG00000010540	-	67	70.619	ENSMLUG00000023530	-	100	70.619	Myotis_lucifugus
ENSNGAG00000010540	-	100	74.453	ENSMLUG00000029495	-	100	74.453	Myotis_lucifugus
ENSNGAG00000010540	-	100	50.400	ENSNBRG00000003952	polr2c	100	50.400	Neolamprologus_brichardi
ENSNGAG00000010540	-	100	64.202	ENSNLEG00000003034	POLR2C	100	64.202	Nomascus_leucogenys
ENSNGAG00000010540	-	100	66.545	ENSMEUG00000014741	POLR2C	100	66.545	Notamacropus_eugenii
ENSNGAG00000010540	-	100	73.091	ENSOPRG00000006979	POLR2C	100	73.091	Ochotona_princeps
ENSNGAG00000010540	-	100	74.909	ENSODEG00000016934	POLR2C	100	74.909	Octodon_degus
ENSNGAG00000010540	-	100	67.273	ENSONIG00000010914	polr2c	100	67.273	Oreochromis_niloticus
ENSNGAG00000010540	-	83	74.783	ENSOANG00000009337	POLR2C	100	74.783	Ornithorhynchus_anatinus
ENSNGAG00000010540	-	100	74.182	ENSOCUG00000014984	POLR2C	100	74.182	Oryctolagus_cuniculus
ENSNGAG00000010540	-	100	67.273	ENSORLG00000015108	polr2c	100	67.273	Oryzias_latipes
ENSNGAG00000010540	-	100	66.909	ENSORLG00020013566	polr2c	100	66.909	Oryzias_latipes_hni
ENSNGAG00000010540	-	100	67.273	ENSORLG00015003751	polr2c	100	67.273	Oryzias_latipes_hsok
ENSNGAG00000010540	-	100	67.273	ENSOMEG00000019444	polr2c	100	67.273	Oryzias_melastigma
ENSNGAG00000010540	-	100	73.455	ENSOGAG00000016866	POLR2C	100	73.455	Otolemur_garnettii
ENSNGAG00000010540	-	99	44.531	ENSOGAG00000029610	-	100	44.531	Otolemur_garnettii
ENSNGAG00000010540	-	100	74.909	ENSOARG00000000302	POLR2C	100	74.909	Ovis_aries
ENSNGAG00000010540	-	100	69.818	ENSPPAG00000042822	POLR2C	100	69.818	Pan_paniscus
ENSNGAG00000010540	-	100	74.909	ENSPPRG00000003215	POLR2C	100	74.909	Panthera_pardus
ENSNGAG00000010540	-	97	71.004	ENSPTIG00000010297	POLR2C	98	71.004	Panthera_tigris_altaica
ENSNGAG00000010540	-	100	74.545	ENSPTRG00000008157	POLR2C	100	74.545	Pan_troglodytes
ENSNGAG00000010540	-	100	74.545	ENSPANG00000006264	POLR2C	100	74.545	Papio_anubis
ENSNGAG00000010540	-	100	67.273	ENSPKIG00000005228	polr2c	100	67.273	Paramormyrops_kingsleyae
ENSNGAG00000010540	-	90	74.797	ENSPSIG00000016112	POLR2C	90	74.797	Pelodiscus_sinensis
ENSNGAG00000010540	-	77	69.268	ENSPMGG00000021249	polr2c	84	69.268	Periophthalmus_magnuspinnatus
ENSNGAG00000010540	-	100	74.545	ENSPEMG00000014204	Polr2c	100	74.545	Peromyscus_maniculatus_bairdii
ENSNGAG00000010540	-	81	65.888	ENSPMAG00000004827	polr2c	94	65.888	Petromyzon_marinus
ENSNGAG00000010540	-	100	73.091	ENSPCIG00000015111	POLR2C	100	73.091	Phascolarctos_cinereus
ENSNGAG00000010540	-	100	66.909	ENSPFOG00000024666	polr2c	100	66.909	Poecilia_formosa
ENSNGAG00000010540	-	100	66.909	ENSPLAG00000019750	polr2c	100	66.909	Poecilia_latipinna
ENSNGAG00000010540	-	100	66.909	ENSPMEG00000001741	polr2c	100	66.909	Poecilia_mexicana
ENSNGAG00000010540	-	100	63.636	ENSPREG00000003090	polr2c	100	63.636	Poecilia_reticulata
ENSNGAG00000010540	-	100	74.545	ENSPPYG00000007390	POLR2C	100	74.545	Pongo_abelii
ENSNGAG00000010540	-	83	73.362	ENSPCAG00000002423	POLR2C	100	73.362	Procavia_capensis
ENSNGAG00000010540	-	100	73.818	ENSPCOG00000017282	POLR2C	100	73.818	Propithecus_coquereli
ENSNGAG00000010540	-	100	74.909	ENSPVAG00000001399	POLR2C	100	74.909	Pteropus_vampyrus
ENSNGAG00000010540	-	100	67.273	ENSPNYG00000003756	polr2c	100	67.273	Pundamilia_nyererei
ENSNGAG00000010540	-	100	67.636	ENSPNAG00000012133	polr2c	100	67.636	Pygocentrus_nattereri
ENSNGAG00000010540	-	100	74.545	ENSRNOG00000015720	Polr2c	100	74.545	Rattus_norvegicus
ENSNGAG00000010540	-	100	74.545	ENSRBIG00000026549	POLR2C	100	74.545	Rhinopithecus_bieti
ENSNGAG00000010540	-	100	74.545	ENSRROG00000045745	POLR2C	100	74.545	Rhinopithecus_roxellana
ENSNGAG00000010540	-	91	37.154	YIL021W	RPB3	78	37.154	Saccharomyces_cerevisiae
ENSNGAG00000010540	-	100	74.545	ENSSBOG00000030004	POLR2C	100	74.545	Saimiri_boliviensis_boliviensis
ENSNGAG00000010540	-	100	66.182	ENSSFOG00015023460	polr2c	100	66.182	Scleropages_formosus
ENSNGAG00000010540	-	100	66.545	ENSSMAG00000002827	polr2c	81	66.545	Scophthalmus_maximus
ENSNGAG00000010540	-	100	67.273	ENSSDUG00000003354	polr2c	100	67.273	Seriola_dumerili
ENSNGAG00000010540	-	100	67.273	ENSSLDG00000003555	polr2c	100	67.273	Seriola_lalandi_dorsalis
ENSNGAG00000010540	-	59	59.615	ENSSARG00000001565	-	100	59.615	Sorex_araneus
ENSNGAG00000010540	-	100	72.364	ENSSPUG00000012934	POLR2C	100	72.364	Sphenodon_punctatus
ENSNGAG00000010540	-	100	66.909	ENSSPAG00000005108	polr2c	100	66.909	Stegastes_partitus
ENSNGAG00000010540	-	100	74.545	ENSSSCG00000025454	POLR2C	100	74.545	Sus_scrofa
ENSNGAG00000010540	-	100	72.727	ENSTGUG00000004996	POLR2C	100	72.727	Taeniopygia_guttata
ENSNGAG00000010540	-	100	66.909	ENSTRUG00000004676	polr2c	100	66.909	Takifugu_rubripes
ENSNGAG00000010540	-	100	66.545	ENSTNIG00000008851	polr2c	100	66.545	Tetraodon_nigroviridis
ENSNGAG00000010540	-	100	73.455	ENSTBEG00000009442	POLR2C	100	73.455	Tupaia_belangeri
ENSNGAG00000010540	-	83	75.546	ENSTTRG00000010060	POLR2C	100	75.546	Tursiops_truncatus
ENSNGAG00000010540	-	100	74.909	ENSUAMG00000014170	POLR2C	100	74.909	Ursus_americanus
ENSNGAG00000010540	-	92	75.600	ENSUMAG00000021686	POLR2C	96	75.600	Ursus_maritimus
ENSNGAG00000010540	-	65	69.942	ENSVPAG00000007590	POLR2C	94	69.942	Vicugna_pacos
ENSNGAG00000010540	-	100	70.545	ENSVVUG00000023516	-	100	70.545	Vulpes_vulpes
ENSNGAG00000010540	-	100	65.818	ENSXETG00000013784	polr2c	100	65.818	Xenopus_tropicalis
ENSNGAG00000010540	-	100	66.909	ENSXCOG00000020734	polr2c	100	66.909	Xiphophorus_couchianus
ENSNGAG00000010540	-	100	66.909	ENSXMAG00000015984	polr2c	100	66.909	Xiphophorus_maculatus