EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000010677 (Gene tree)
Gene ID: 103748783
Gene Symbol: Cstf3
Alias: 4732468G05Rik
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 84324 bases
Position: chrKL199188.1:6369949-6454272
Accession: 103748783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000007471	Suf	PF05843.14	5.7e-84	1	1
ENSNGAP00000007467	Suf	PF05843.14	6.1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000012957	-	2145	-	ENSNGAP00000007471	714 (aa)	-	-
ENSNGAT00000012953	-	2154	XM_008851560	ENSNGAP00000007467	717 (aa)	XP_008849782	UPI0004ED2120

Gene Model

Click here to download ENSNGAG00000010677's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000010677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000010677	Cstf3	100	99.303	ENSG00000176102	CSTF3	100	99.303	Homo_sapiens
ENSNGAG00000010677	Cstf3	100	91.086	ENSAPOG00000014054	cstf3	100	91.086	Acanthochromis_polyacanthus
ENSNGAG00000010677	Cstf3	99	99.436	ENSAMEG00000007187	CSTF3	98	99.436	Ailuropoda_melanoleuca
ENSNGAG00000010677	Cstf3	88	85.920	ENSACIG00000005539	cstf3	100	85.920	Amphilophus_citrinellus
ENSNGAG00000010677	Cstf3	100	90.947	ENSAOCG00000010930	cstf3	100	90.947	Amphiprion_ocellaris
ENSNGAG00000010677	Cstf3	100	90.947	ENSAPEG00000007903	cstf3	100	90.947	Amphiprion_percula
ENSNGAG00000010677	Cstf3	100	90.808	ENSATEG00000000190	cstf3	100	90.808	Anabas_testudineus
ENSNGAG00000010677	Cstf3	99	97.881	ENSAPLG00000007217	CSTF3	100	97.881	Anas_platyrhynchos
ENSNGAG00000010677	Cstf3	100	95.543	ENSACAG00000002823	CSTF3	100	95.543	Anolis_carolinensis
ENSNGAG00000010677	Cstf3	100	99.303	ENSANAG00000020699	CSTF3	100	99.520	Aotus_nancymaae
ENSNGAG00000010677	Cstf3	99	91.631	ENSACLG00000007820	cstf3	100	91.226	Astatotilapia_calliptera
ENSNGAG00000010677	Cstf3	100	90.390	ENSAMXG00000014198	cstf3	100	90.669	Astyanax_mexicanus
ENSNGAG00000010677	Cstf3	100	99.303	ENSBTAG00000008617	CSTF3	100	99.555	Bos_taurus
ENSNGAG00000010677	Cstf3	98	49.176	WBGene00006307	suf-1	99	49.176	Caenorhabditis_elegans
ENSNGAG00000010677	Cstf3	100	99.303	ENSCJAG00000005533	CSTF3	100	99.520	Callithrix_jacchus
ENSNGAG00000010677	Cstf3	100	99.303	ENSCAFG00000007264	CSTF3	100	99.303	Canis_familiaris
ENSNGAG00000010677	Cstf3	99	99.577	ENSCAFG00020002715	CSTF3	99	99.577	Canis_lupus_dingo
ENSNGAG00000010677	Cstf3	98	98.009	ENSCHIG00000016418	CSTF3	100	99.520	Capra_hircus
ENSNGAG00000010677	Cstf3	99	99.154	ENSTSYG00000000451	CSTF3	100	99.154	Carlito_syrichta
ENSNGAG00000010677	Cstf3	84	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSNGAG00000010677	Cstf3	100	99.303	ENSCPOG00000005545	CSTF3	100	99.303	Cavia_porcellus
ENSNGAG00000010677	Cstf3	100	99.303	ENSCCAG00000024790	CSTF3	100	99.520	Cebus_capucinus
ENSNGAG00000010677	Cstf3	100	99.303	ENSCATG00000007080	CSTF3	100	99.520	Cercocebus_atys
ENSNGAG00000010677	Cstf3	100	99.303	ENSCLAG00000016179	CSTF3	100	99.303	Chinchilla_lanigera
ENSNGAG00000010677	Cstf3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSNGAG00000010677	Cstf3	100	97.493	ENSCPBG00000006753	CSTF3	100	97.493	Chrysemys_picta_bellii
ENSNGAG00000010677	Cstf3	99	61.818	ENSCING00000006401	-	99	61.613	Ciona_intestinalis
ENSNGAG00000010677	Cstf3	99	61.506	ENSCSAVG00000004851	-	100	61.506	Ciona_savignyi
ENSNGAG00000010677	Cstf3	100	99.303	ENSCANG00000035468	CSTF3	100	99.520	Colobus_angolensis_palliatus
ENSNGAG00000010677	Cstf3	100	99.721	ENSCGRG00001014773	Cstf3	100	99.721	Cricetulus_griseus_chok1gshd
ENSNGAG00000010677	Cstf3	100	99.721	ENSCGRG00000004142	Cstf3	100	99.721	Cricetulus_griseus_crigri
ENSNGAG00000010677	Cstf3	100	91.353	ENSCSEG00000014283	cstf3	100	91.353	Cynoglossus_semilaevis
ENSNGAG00000010677	Cstf3	100	90.111	ENSCVAG00000019739	cstf3	100	90.111	Cyprinodon_variegatus
ENSNGAG00000010677	Cstf3	100	90.795	ENSDARG00000018904	cstf3	100	90.795	Danio_rerio
ENSNGAG00000010677	Cstf3	99	99.154	ENSDNOG00000007366	CSTF3	99	99.154	Dasypus_novemcinctus
ENSNGAG00000010677	Cstf3	99	91.678	ENSDORG00000005898	Cstf3	99	91.678	Dipodomys_ordii
ENSNGAG00000010677	Cstf3	99	57.280	FBgn0003559	su(f)	98	57.280	Drosophila_melanogaster
ENSNGAG00000010677	Cstf3	90	94.081	ENSETEG00000017097	CSTF3	90	94.081	Echinops_telfairi
ENSNGAG00000010677	Cstf3	85	74.215	ENSEBUG00000015459	cstf3	96	74.215	Eptatretus_burgeri
ENSNGAG00000010677	Cstf3	98	99.714	ENSEASG00005019884	CSTF3	100	99.714	Equus_asinus_asinus
ENSNGAG00000010677	Cstf3	98	99.714	ENSECAG00000023338	CSTF3	100	99.714	Equus_caballus
ENSNGAG00000010677	Cstf3	100	93.724	ENSEEUG00000015167	CSTF3	100	93.724	Erinaceus_europaeus
ENSNGAG00000010677	Cstf3	100	89.958	ENSELUG00000023393	cstf3	100	89.958	Esox_lucius
ENSNGAG00000010677	Cstf3	100	99.163	ENSFCAG00000030711	CSTF3	100	99.163	Felis_catus
ENSNGAG00000010677	Cstf3	93	98.649	ENSFALG00000010764	CSTF3	100	97.081	Ficedula_albicollis
ENSNGAG00000010677	Cstf3	100	99.163	ENSFDAG00000012082	CSTF3	100	99.163	Fukomys_damarensis
ENSNGAG00000010677	Cstf3	100	90.251	ENSFHEG00000020623	cstf3	100	90.251	Fundulus_heteroclitus
ENSNGAG00000010677	Cstf3	100	89.152	ENSGMOG00000012275	cstf3	100	89.152	Gadus_morhua
ENSNGAG00000010677	Cstf3	100	97.354	ENSGALG00000011685	CSTF3	100	97.354	Gallus_gallus
ENSNGAG00000010677	Cstf3	100	90.529	ENSGAFG00000002181	cstf3	100	90.529	Gambusia_affinis
ENSNGAG00000010677	Cstf3	100	90.251	ENSGACG00000015997	cstf3	100	90.251	Gasterosteus_aculeatus
ENSNGAG00000010677	Cstf3	99	97.756	ENSGAGG00000006200	CSTF3	99	97.756	Gopherus_agassizii
ENSNGAG00000010677	Cstf3	99	93.653	ENSGGOG00000026591	CSTF3	99	93.653	Gorilla_gorilla
ENSNGAG00000010677	Cstf3	99	91.631	ENSHBUG00000016656	cstf3	100	91.226	Haplochromis_burtoni
ENSNGAG00000010677	Cstf3	100	99.303	ENSHGLG00000017834	CSTF3	100	99.303	Heterocephalus_glaber_female
ENSNGAG00000010677	Cstf3	100	99.303	ENSHGLG00100018042	CSTF3	100	99.303	Heterocephalus_glaber_male
ENSNGAG00000010677	Cstf3	99	89.235	ENSHCOG00000015218	cstf3	100	88.997	Hippocampus_comes
ENSNGAG00000010677	Cstf3	100	89.958	ENSIPUG00000013170	CSTF3	100	89.958	Ictalurus_punctatus
ENSNGAG00000010677	Cstf3	100	99.303	ENSSTOG00000013306	CSTF3	100	99.303	Ictidomys_tridecemlineatus
ENSNGAG00000010677	Cstf3	99	87.853	ENSJJAG00000018430	Cstf3	99	87.448	Jaculus_jaculus
ENSNGAG00000010677	Cstf3	99	90.590	ENSKMAG00000010916	cstf3	99	90.590	Kryptolebias_marmoratus
ENSNGAG00000010677	Cstf3	100	89.833	ENSLBEG00000002306	cstf3	100	89.833	Labrus_bergylta
ENSNGAG00000010677	Cstf3	100	93.445	ENSLACG00000017296	CSTF3	100	93.445	Latimeria_chalumnae
ENSNGAG00000010677	Cstf3	100	92.748	ENSLOCG00000004415	cstf3	100	92.748	Lepisosteus_oculatus
ENSNGAG00000010677	Cstf3	100	99.163	ENSLAFG00000008712	CSTF3	100	99.163	Loxodonta_africana
ENSNGAG00000010677	Cstf3	100	99.303	ENSMFAG00000029516	CSTF3	100	99.520	Macaca_fascicularis
ENSNGAG00000010677	Cstf3	100	99.303	ENSMMUG00000002542	CSTF3	100	99.303	Macaca_mulatta
ENSNGAG00000010677	Cstf3	100	99.303	ENSMNEG00000021807	CSTF3	100	99.520	Macaca_nemestrina
ENSNGAG00000010677	Cstf3	100	99.303	ENSMLEG00000039594	CSTF3	100	99.520	Mandrillus_leucophaeus
ENSNGAG00000010677	Cstf3	100	90.669	ENSMAMG00000020423	cstf3	100	90.669	Mastacembelus_armatus
ENSNGAG00000010677	Cstf3	99	91.631	ENSMZEG00005012082	cstf3	100	91.226	Maylandia_zebra
ENSNGAG00000010677	Cstf3	100	97.493	ENSMGAG00000001383	CSTF3	100	97.493	Meleagris_gallopavo
ENSNGAG00000010677	Cstf3	100	99.582	ENSMAUG00000002487	Cstf3	100	99.582	Mesocricetus_auratus
ENSNGAG00000010677	Cstf3	100	99.024	ENSMICG00000004784	CSTF3	100	99.200	Microcebus_murinus
ENSNGAG00000010677	Cstf3	100	99.721	ENSMOCG00000017583	Cstf3	100	99.721	Microtus_ochrogaster
ENSNGAG00000010677	Cstf3	99	91.255	ENSMMOG00000016026	cstf3	95	91.255	Mola_mola
ENSNGAG00000010677	Cstf3	100	98.326	ENSMODG00000009745	-	100	98.326	Monodelphis_domestica
ENSNGAG00000010677	Cstf3	100	83.682	ENSMODG00000025205	-	100	83.682	Monodelphis_domestica
ENSNGAG00000010677	Cstf3	100	90.669	ENSMALG00000012050	cstf3	100	90.669	Monopterus_albus
ENSNGAG00000010677	Cstf3	100	99.721	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.721	Mus_caroli
ENSNGAG00000010677	Cstf3	100	99.721	ENSMUSG00000027176	Cstf3	100	99.721	Mus_musculus
ENSNGAG00000010677	Cstf3	100	99.721	MGP_PahariEiJ_G0025464	Cstf3	100	99.721	Mus_pahari
ENSNGAG00000010677	Cstf3	100	99.721	MGP_SPRETEiJ_G0024939	Cstf3	100	99.721	Mus_spretus
ENSNGAG00000010677	Cstf3	100	99.163	ENSMPUG00000011457	CSTF3	100	99.163	Mustela_putorius_furo
ENSNGAG00000010677	Cstf3	99	99.294	ENSMLUG00000003073	-	99	99.294	Myotis_lucifugus
ENSNGAG00000010677	Cstf3	100	95.955	ENSMLUG00000026022	-	100	95.955	Myotis_lucifugus
ENSNGAG00000010677	Cstf3	88	90.880	ENSNBRG00000007345	cstf3	100	90.880	Neolamprologus_brichardi
ENSNGAG00000010677	Cstf3	100	99.303	ENSNLEG00000017901	CSTF3	100	99.520	Nomascus_leucogenys
ENSNGAG00000010677	Cstf3	73	94.646	ENSMEUG00000005640	-	100	94.646	Notamacropus_eugenii
ENSNGAG00000010677	Cstf3	67	100.000	ENSOPRG00000000199	-	67	100.000	Ochotona_princeps
ENSNGAG00000010677	Cstf3	89	86.792	ENSODEG00000006311	-	97	86.792	Octodon_degus
ENSNGAG00000010677	Cstf3	100	99.303	ENSODEG00000016737	-	100	99.303	Octodon_degus
ENSNGAG00000010677	Cstf3	99	91.631	ENSONIG00000005563	cstf3	100	91.226	Oreochromis_niloticus
ENSNGAG00000010677	Cstf3	91	96.923	ENSOANG00000015140	CSTF3	100	96.923	Ornithorhynchus_anatinus
ENSNGAG00000010677	Cstf3	100	99.163	ENSOCUG00000015417	CSTF3	100	99.163	Oryctolagus_cuniculus
ENSNGAG00000010677	Cstf3	100	90.795	ENSORLG00000009762	cstf3	100	90.795	Oryzias_latipes
ENSNGAG00000010677	Cstf3	100	90.795	ENSORLG00020005540	cstf3	100	90.795	Oryzias_latipes_hni
ENSNGAG00000010677	Cstf3	100	90.656	ENSORLG00015003551	cstf3	100	90.656	Oryzias_latipes_hsok
ENSNGAG00000010677	Cstf3	100	90.098	ENSOMEG00000003848	cstf3	100	90.098	Oryzias_melastigma
ENSNGAG00000010677	Cstf3	100	98.889	ENSOGAG00000010229	CSTF3	100	98.889	Otolemur_garnettii
ENSNGAG00000010677	Cstf3	90	99.378	ENSOARG00000017271	CSTF3	99	99.378	Ovis_aries
ENSNGAG00000010677	Cstf3	99	95.910	ENSPPAG00000027358	CSTF3	99	95.910	Pan_paniscus
ENSNGAG00000010677	Cstf3	100	99.163	ENSPPRG00000016852	CSTF3	100	99.163	Panthera_pardus
ENSNGAG00000010677	Cstf3	100	99.163	ENSPTIG00000008716	CSTF3	100	99.163	Panthera_tigris_altaica
ENSNGAG00000010677	Cstf3	100	99.303	ENSPTRG00000003485	CSTF3	100	99.303	Pan_troglodytes
ENSNGAG00000010677	Cstf3	100	99.303	ENSPANG00000013722	CSTF3	100	99.303	Papio_anubis
ENSNGAG00000010677	Cstf3	100	92.190	ENSPKIG00000023648	cstf3	100	92.190	Paramormyrops_kingsleyae
ENSNGAG00000010677	Cstf3	100	97.075	ENSPSIG00000009173	CSTF3	100	97.075	Pelodiscus_sinensis
ENSNGAG00000010677	Cstf3	76	94.881	ENSPMGG00000000164	cstf3	99	94.881	Periophthalmus_magnuspinnatus
ENSNGAG00000010677	Cstf3	100	99.582	ENSPEMG00000011481	Cstf3	100	99.582	Peromyscus_maniculatus_bairdii
ENSNGAG00000010677	Cstf3	99	80.478	ENSPMAG00000007282	cstf3	99	80.478	Petromyzon_marinus
ENSNGAG00000010677	Cstf3	99	95.915	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSNGAG00000010677	Cstf3	100	80.780	ENSPCIG00000030419	-	90	81.476	Phascolarctos_cinereus
ENSNGAG00000010677	Cstf3	100	90.669	ENSPFOG00000017239	cstf3	100	90.669	Poecilia_formosa
ENSNGAG00000010677	Cstf3	100	90.669	ENSPLAG00000009456	cstf3	100	90.669	Poecilia_latipinna
ENSNGAG00000010677	Cstf3	100	90.669	ENSPMEG00000010320	cstf3	100	90.669	Poecilia_mexicana
ENSNGAG00000010677	Cstf3	100	90.669	ENSPREG00000013549	cstf3	100	90.669	Poecilia_reticulata
ENSNGAG00000010677	Cstf3	100	99.303	ENSPPYG00000003375	CSTF3	100	99.303	Pongo_abelii
ENSNGAG00000010677	Cstf3	71	99.652	ENSPCAG00000008025	-	71	99.652	Procavia_capensis
ENSNGAG00000010677	Cstf3	100	93.863	ENSPCOG00000014417	CSTF3	100	93.863	Propithecus_coquereli
ENSNGAG00000010677	Cstf3	100	94.003	ENSPVAG00000002350	CSTF3	100	94.003	Pteropus_vampyrus
ENSNGAG00000010677	Cstf3	99	91.631	ENSPNYG00000018259	cstf3	100	91.226	Pundamilia_nyererei
ENSNGAG00000010677	Cstf3	100	91.632	ENSPNAG00000020182	cstf3	100	91.632	Pygocentrus_nattereri
ENSNGAG00000010677	Cstf3	88	99.360	ENSRNOG00000012089	Cstf3	100	99.360	Rattus_norvegicus
ENSNGAG00000010677	Cstf3	99	98.166	ENSRBIG00000044258	CSTF3	100	99.520	Rhinopithecus_bieti
ENSNGAG00000010677	Cstf3	100	99.303	ENSRROG00000043450	CSTF3	100	99.520	Rhinopithecus_roxellana
ENSNGAG00000010677	Cstf3	100	99.303	ENSSBOG00000024764	CSTF3	100	99.520	Saimiri_boliviensis_boliviensis
ENSNGAG00000010677	Cstf3	100	84.937	ENSSHAG00000003135	-	99	84.937	Sarcophilus_harrisii
ENSNGAG00000010677	Cstf3	100	97.350	ENSSHAG00000018128	-	100	97.350	Sarcophilus_harrisii
ENSNGAG00000010677	Cstf3	100	92.190	ENSSFOG00015022133	cstf3	100	92.190	Scleropages_formosus
ENSNGAG00000010677	Cstf3	100	90.111	ENSSMAG00000002197	cstf3	100	90.111	Scophthalmus_maximus
ENSNGAG00000010677	Cstf3	100	90.947	ENSSDUG00000020426	cstf3	100	90.947	Seriola_dumerili
ENSNGAG00000010677	Cstf3	100	91.086	ENSSLDG00000025649	cstf3	100	91.086	Seriola_lalandi_dorsalis
ENSNGAG00000010677	Cstf3	100	98.884	ENSSARG00000000391	CSTF3	100	98.884	Sorex_araneus
ENSNGAG00000010677	Cstf3	97	96.961	ENSSPUG00000010546	CSTF3	100	96.961	Sphenodon_punctatus
ENSNGAG00000010677	Cstf3	100	90.947	ENSSPAG00000004958	cstf3	100	90.947	Stegastes_partitus
ENSNGAG00000010677	Cstf3	99	98.883	ENSSSCG00000040954	CSTF3	100	98.883	Sus_scrofa
ENSNGAG00000010677	Cstf3	99	97.881	ENSTGUG00000005010	CSTF3	100	97.881	Taeniopygia_guttata
ENSNGAG00000010677	Cstf3	100	89.833	ENSTRUG00000004959	cstf3	100	89.833	Takifugu_rubripes
ENSNGAG00000010677	Cstf3	99	90.550	ENSTNIG00000013811	cstf3	99	90.550	Tetraodon_nigroviridis
ENSNGAG00000010677	Cstf3	90	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSNGAG00000010677	Cstf3	100	96.234	ENSTTRG00000016366	CSTF3	100	96.234	Tursiops_truncatus
ENSNGAG00000010677	Cstf3	99	99.295	ENSUMAG00000018971	CSTF3	100	99.200	Ursus_maritimus
ENSNGAG00000010677	Cstf3	100	99.163	ENSVPAG00000007800	CSTF3	100	99.163	Vicugna_pacos
ENSNGAG00000010677	Cstf3	99	99.577	ENSVVUG00000014938	CSTF3	100	99.520	Vulpes_vulpes
ENSNGAG00000010677	Cstf3	66	43.776	ENSXETG00000017946	-	99	43.776	Xenopus_tropicalis
ENSNGAG00000010677	Cstf3	89	79.375	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSNGAG00000010677	Cstf3	88	90.240	ENSXCOG00000011741	cstf3	100	90.240	Xiphophorus_couchianus
ENSNGAG00000010677	Cstf3	100	90.669	ENSXMAG00000009545	cstf3	100	90.669	Xiphophorus_maculatus