EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000010923 (Gene tree)
Gene ID: 103736872
Gene Symbol: Edc3
Alias: Lsm16|Yjdc
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 41908 bases
Position: chrKL201351.1:14923187-14965094
Accession: 103736872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000007728	FDF	PF09532.10	1.3e-18	1	1
ENSNGAP00000007728	LSM14	PF12701.7	6.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000013218	-	1738	XM_008836500	ENSNGAP00000007728	508 (aa)	XP_008834722	UPI0004ED3F57

Gene Model

Click here to download ENSNGAG00000010923's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000010923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000010923	Edc3	100	96.063	ENSG00000179151	EDC3	100	98.148	Homo_sapiens
ENSNGAG00000010923	Edc3	100	69.216	ENSAPOG00000010791	edc3	100	69.216	Acanthochromis_polyacanthus
ENSNGAG00000010923	Edc3	100	55.922	ENSAPOG00000008655	EDC3	100	55.922	Acanthochromis_polyacanthus
ENSNGAG00000010923	Edc3	100	95.276	ENSAMEG00000008963	EDC3	100	95.276	Ailuropoda_melanoleuca
ENSNGAG00000010923	Edc3	99	59.806	ENSACIG00000005330	EDC3	99	59.612	Amphilophus_citrinellus
ENSNGAG00000010923	Edc3	100	68.762	ENSACIG00000017751	edc3	100	68.762	Amphilophus_citrinellus
ENSNGAG00000010923	Edc3	100	58.058	ENSAOCG00000009103	-	100	58.058	Amphiprion_ocellaris
ENSNGAG00000010923	Edc3	100	69.412	ENSAOCG00000005431	edc3	100	69.412	Amphiprion_ocellaris
ENSNGAG00000010923	Edc3	100	58.058	ENSAPEG00000007841	EDC3	100	58.058	Amphiprion_percula
ENSNGAG00000010923	Edc3	100	69.412	ENSAPEG00000000968	edc3	100	69.412	Amphiprion_percula
ENSNGAG00000010923	Edc3	100	70.334	ENSATEG00000015505	edc3	100	70.334	Anabas_testudineus
ENSNGAG00000010923	Edc3	100	58.654	ENSATEG00000004205	-	100	58.077	Anabas_testudineus
ENSNGAG00000010923	Edc3	90	86.813	ENSAPLG00000008957	EDC3	100	86.813	Anas_platyrhynchos
ENSNGAG00000010923	Edc3	78	87.154	ENSACAG00000000460	-	100	87.154	Anolis_carolinensis
ENSNGAG00000010923	Edc3	100	96.063	ENSANAG00000024078	EDC3	100	96.063	Aotus_nancymaae
ENSNGAG00000010923	Edc3	99	58.008	ENSACLG00000018776	-	99	58.008	Astatotilapia_calliptera
ENSNGAG00000010923	Edc3	100	67.780	ENSACLG00000007232	edc3	100	67.780	Astatotilapia_calliptera
ENSNGAG00000010923	Edc3	100	70.485	ENSAMXG00000001589	edc3	100	70.485	Astyanax_mexicanus
ENSNGAG00000010923	Edc3	100	95.472	ENSBTAG00000007308	EDC3	100	95.472	Bos_taurus
ENSNGAG00000010923	Edc3	100	96.260	ENSCJAG00000017681	EDC3	100	96.260	Callithrix_jacchus
ENSNGAG00000010923	Edc3	100	95.472	ENSCAFG00000017935	EDC3	100	95.472	Canis_familiaris
ENSNGAG00000010923	Edc3	100	95.472	ENSCAFG00020003909	EDC3	100	95.472	Canis_lupus_dingo
ENSNGAG00000010923	Edc3	100	95.669	ENSCHIG00000023658	EDC3	100	95.669	Capra_hircus
ENSNGAG00000010923	Edc3	100	95.669	ENSTSYG00000004822	EDC3	100	95.669	Carlito_syrichta
ENSNGAG00000010923	Edc3	100	94.685	ENSCPOG00000015595	EDC3	100	94.685	Cavia_porcellus
ENSNGAG00000010923	Edc3	100	96.457	ENSCCAG00000021663	EDC3	100	96.457	Cebus_capucinus
ENSNGAG00000010923	Edc3	100	96.654	ENSCATG00000037511	EDC3	100	96.654	Cercocebus_atys
ENSNGAG00000010923	Edc3	100	94.291	ENSCLAG00000005700	EDC3	100	94.291	Chinchilla_lanigera
ENSNGAG00000010923	Edc3	100	96.654	ENSCSAG00000014239	EDC3	100	96.654	Chlorocebus_sabaeus
ENSNGAG00000010923	Edc3	100	88.189	ENSCPBG00000024239	EDC3	100	88.189	Chrysemys_picta_bellii
ENSNGAG00000010923	Edc3	100	38.077	ENSCING00000022142	-	99	38.077	Ciona_intestinalis
ENSNGAG00000010923	Edc3	100	96.654	ENSCANG00000028699	EDC3	100	96.654	Colobus_angolensis_palliatus
ENSNGAG00000010923	Edc3	100	97.244	ENSCGRG00001013874	Edc3	100	97.244	Cricetulus_griseus_chok1gshd
ENSNGAG00000010923	Edc3	100	97.244	ENSCGRG00000011885	Edc3	100	97.244	Cricetulus_griseus_crigri
ENSNGAG00000010923	Edc3	99	68.898	ENSCSEG00000012996	edc3	99	68.898	Cynoglossus_semilaevis
ENSNGAG00000010923	Edc3	100	68.959	ENSCVAG00000008023	edc3	100	68.959	Cyprinodon_variegatus
ENSNGAG00000010923	Edc3	99	68.164	ENSDARG00000051931	edc3	99	68.616	Danio_rerio
ENSNGAG00000010923	Edc3	100	83.721	ENSDNOG00000030661	EDC3	100	83.721	Dasypus_novemcinctus
ENSNGAG00000010923	Edc3	64	96.296	ENSETEG00000002398	-	64	96.296	Echinops_telfairi
ENSNGAG00000010923	Edc3	100	96.260	ENSEASG00005005071	EDC3	100	96.260	Equus_asinus_asinus
ENSNGAG00000010923	Edc3	100	96.260	ENSECAG00000017994	EDC3	100	96.260	Equus_caballus
ENSNGAG00000010923	Edc3	100	64.717	ENSELUG00000005794	edc3	100	64.717	Esox_lucius
ENSNGAG00000010923	Edc3	100	61.448	ENSELUG00000007607	EDC3	100	61.448	Esox_lucius
ENSNGAG00000010923	Edc3	100	94.685	ENSFCAG00000002014	EDC3	100	94.685	Felis_catus
ENSNGAG00000010923	Edc3	98	84.569	ENSFALG00000004543	EDC3	96	84.569	Ficedula_albicollis
ENSNGAG00000010923	Edc3	100	93.898	ENSFDAG00000012582	EDC3	100	93.898	Fukomys_damarensis
ENSNGAG00000010923	Edc3	100	69.608	ENSFHEG00000009375	edc3	100	69.608	Fundulus_heteroclitus
ENSNGAG00000010923	Edc3	100	67.969	ENSGMOG00000002715	edc3	100	68.359	Gadus_morhua
ENSNGAG00000010923	Edc3	100	88.189	ENSGALG00000040181	EDC3	100	88.189	Gallus_gallus
ENSNGAG00000010923	Edc3	100	68.173	ENSGAFG00000014433	edc3	100	68.566	Gambusia_affinis
ENSNGAG00000010923	Edc3	100	68.369	ENSGACG00000009783	edc3	100	68.369	Gasterosteus_aculeatus
ENSNGAG00000010923	Edc3	99	55.513	ENSGACG00000014671	EDC3	99	56.893	Gasterosteus_aculeatus
ENSNGAG00000010923	Edc3	100	87.795	ENSGAGG00000023477	EDC3	100	87.795	Gopherus_agassizii
ENSNGAG00000010923	Edc3	100	96.063	ENSGGOG00000003552	EDC3	100	96.063	Gorilla_gorilla
ENSNGAG00000010923	Edc3	99	58.008	ENSHBUG00000020817	EDC3	99	58.008	Haplochromis_burtoni
ENSNGAG00000010923	Edc3	100	67.780	ENSHBUG00000003635	edc3	100	67.780	Haplochromis_burtoni
ENSNGAG00000010923	Edc3	100	67.578	ENSHCOG00000016834	edc3	100	67.906	Hippocampus_comes
ENSNGAG00000010923	Edc3	99	69.667	ENSIPUG00000005695	edc3	100	69.667	Ictalurus_punctatus
ENSNGAG00000010923	Edc3	100	96.260	ENSSTOG00000013936	EDC3	100	96.260	Ictidomys_tridecemlineatus
ENSNGAG00000010923	Edc3	100	95.669	ENSJJAG00000008074	Edc3	100	95.669	Jaculus_jaculus
ENSNGAG00000010923	Edc3	100	55.750	ENSKMAG00000001987	EDC3	100	55.750	Kryptolebias_marmoratus
ENSNGAG00000010923	Edc3	100	68.566	ENSKMAG00000001243	edc3	100	68.566	Kryptolebias_marmoratus
ENSNGAG00000010923	Edc3	100	68.627	ENSLBEG00000013435	edc3	99	69.548	Labrus_bergylta
ENSNGAG00000010923	Edc3	100	57.558	ENSLBEG00000017984	EDC3	100	57.558	Labrus_bergylta
ENSNGAG00000010923	Edc3	100	77.476	ENSLACG00000014149	EDC3	100	77.476	Latimeria_chalumnae
ENSNGAG00000010923	Edc3	99	67.188	ENSLOCG00000014625	edc3	99	67.641	Lepisosteus_oculatus
ENSNGAG00000010923	Edc3	100	94.685	ENSLAFG00000002992	EDC3	100	94.685	Loxodonta_africana
ENSNGAG00000010923	Edc3	100	96.457	ENSMFAG00000043074	EDC3	100	96.457	Macaca_fascicularis
ENSNGAG00000010923	Edc3	100	96.457	ENSMMUG00000011071	EDC3	100	96.457	Macaca_mulatta
ENSNGAG00000010923	Edc3	100	96.457	ENSMNEG00000035316	EDC3	100	96.457	Macaca_nemestrina
ENSNGAG00000010923	Edc3	100	96.654	ENSMLEG00000030372	EDC3	100	96.654	Mandrillus_leucophaeus
ENSNGAG00000010923	Edc3	99	57.617	ENSMAMG00000005423	-	99	57.617	Mastacembelus_armatus
ENSNGAG00000010923	Edc3	100	69.352	ENSMAMG00000000505	edc3	100	69.352	Mastacembelus_armatus
ENSNGAG00000010923	Edc3	100	67.780	ENSMZEG00005004892	edc3	100	67.780	Maylandia_zebra
ENSNGAG00000010923	Edc3	99	58.869	ENSMZEG00005005654	EDC3	99	58.869	Maylandia_zebra
ENSNGAG00000010923	Edc3	100	87.205	ENSMGAG00000002617	EDC3	100	87.205	Meleagris_gallopavo
ENSNGAG00000010923	Edc3	100	95.669	ENSMICG00000043190	EDC3	100	95.669	Microcebus_murinus
ENSNGAG00000010923	Edc3	100	97.244	ENSMOCG00000016205	Edc3	100	97.244	Microtus_ochrogaster
ENSNGAG00000010923	Edc3	99	68.762	ENSMMOG00000012278	edc3	99	69.291	Mola_mola
ENSNGAG00000010923	Edc3	100	91.929	ENSMODG00000009442	EDC3	100	91.929	Monodelphis_domestica
ENSNGAG00000010923	Edc3	100	69.548	ENSMALG00000008658	edc3	100	69.548	Monopterus_albus
ENSNGAG00000010923	Edc3	100	96.654	MGP_CAROLIEiJ_G0032280	Edc3	100	100.000	Mus_caroli
ENSNGAG00000010923	Edc3	100	96.654	ENSMUSG00000038957	Edc3	100	100.000	Mus_musculus
ENSNGAG00000010923	Edc3	100	96.850	MGP_PahariEiJ_G0015146	Edc3	100	100.000	Mus_pahari
ENSNGAG00000010923	Edc3	100	96.457	MGP_SPRETEiJ_G0033420	Edc3	100	100.000	Mus_spretus
ENSNGAG00000010923	Edc3	100	94.882	ENSMPUG00000017293	EDC3	100	94.882	Mustela_putorius_furo
ENSNGAG00000010923	Edc3	100	95.098	ENSMLUG00000016382	EDC3	100	95.098	Myotis_lucifugus
ENSNGAG00000010923	Edc3	100	67.976	ENSNBRG00000002434	edc3	100	67.976	Neolamprologus_brichardi
ENSNGAG00000010923	Edc3	99	58.789	ENSNBRG00000007881	EDC3	99	58.789	Neolamprologus_brichardi
ENSNGAG00000010923	Edc3	100	86.614	ENSNLEG00000014577	EDC3	100	86.614	Nomascus_leucogenys
ENSNGAG00000010923	Edc3	100	90.748	ENSMEUG00000009077	EDC3	100	90.748	Notamacropus_eugenii
ENSNGAG00000010923	Edc3	79	94.444	ENSOPRG00000009540	-	79	94.444	Ochotona_princeps
ENSNGAG00000010923	Edc3	100	67.976	ENSONIG00000008434	edc3	100	67.976	Oreochromis_niloticus
ENSNGAG00000010923	Edc3	99	60.000	ENSONIG00000002932	-	99	60.000	Oreochromis_niloticus
ENSNGAG00000010923	Edc3	78	89.924	ENSOCUG00000017740	EDC3	86	89.924	Oryctolagus_cuniculus
ENSNGAG00000010923	Edc3	100	67.387	ENSORLG00000004883	edc3	100	67.387	Oryzias_latipes
ENSNGAG00000010923	Edc3	100	56.445	ENSORLG00000014399	-	98	56.445	Oryzias_latipes
ENSNGAG00000010923	Edc3	100	67.387	ENSORLG00020012262	edc3	100	67.387	Oryzias_latipes_hni
ENSNGAG00000010923	Edc3	100	56.445	ENSORLG00020019446	-	100	56.445	Oryzias_latipes_hni
ENSNGAG00000010923	Edc3	100	67.387	ENSORLG00015005634	edc3	100	67.387	Oryzias_latipes_hsok
ENSNGAG00000010923	Edc3	100	56.445	ENSORLG00015017635	-	96	56.445	Oryzias_latipes_hsok
ENSNGAG00000010923	Edc3	100	56.445	ENSOMEG00000017354	EDC3	100	56.445	Oryzias_melastigma
ENSNGAG00000010923	Edc3	100	68.627	ENSOMEG00000014026	edc3	100	68.627	Oryzias_melastigma
ENSNGAG00000010923	Edc3	100	96.063	ENSOGAG00000014441	EDC3	100	96.063	Otolemur_garnettii
ENSNGAG00000010923	Edc3	100	94.892	ENSOARG00000003476	EDC3	100	95.285	Ovis_aries
ENSNGAG00000010923	Edc3	100	96.063	ENSPPAG00000040143	EDC3	100	96.063	Pan_paniscus
ENSNGAG00000010923	Edc3	100	95.079	ENSPPRG00000006257	EDC3	100	95.079	Panthera_pardus
ENSNGAG00000010923	Edc3	100	95.079	ENSPTIG00000017424	EDC3	100	95.079	Panthera_tigris_altaica
ENSNGAG00000010923	Edc3	100	96.063	ENSPTRG00000007279	EDC3	100	96.063	Pan_troglodytes
ENSNGAG00000010923	Edc3	100	96.654	ENSPANG00000015997	EDC3	100	96.654	Papio_anubis
ENSNGAG00000010923	Edc3	100	67.969	ENSPKIG00000004416	edc3	100	68.750	Paramormyrops_kingsleyae
ENSNGAG00000010923	Edc3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSNGAG00000010923	Edc3	100	82.283	ENSPSIG00000008474	EDC3	100	82.283	Pelodiscus_sinensis
ENSNGAG00000010923	Edc3	100	66.928	ENSPMGG00000007223	edc3	100	66.928	Periophthalmus_magnuspinnatus
ENSNGAG00000010923	Edc3	100	96.063	ENSPEMG00000015260	Edc3	100	96.063	Peromyscus_maniculatus_bairdii
ENSNGAG00000010923	Edc3	100	89.961	ENSPCIG00000006276	EDC3	70	90.138	Phascolarctos_cinereus
ENSNGAG00000010923	Edc3	100	69.548	ENSPFOG00000012204	edc3	100	69.548	Poecilia_formosa
ENSNGAG00000010923	Edc3	100	69.548	ENSPLAG00000014420	edc3	100	69.548	Poecilia_latipinna
ENSNGAG00000010923	Edc3	100	69.548	ENSPMEG00000023289	edc3	100	69.548	Poecilia_mexicana
ENSNGAG00000010923	Edc3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSNGAG00000010923	Edc3	100	94.882	ENSPPYG00000006642	EDC3	100	94.882	Pongo_abelii
ENSNGAG00000010923	Edc3	88	98.148	ENSPCAG00000002802	EDC3	88	98.148	Procavia_capensis
ENSNGAG00000010923	Edc3	100	95.472	ENSPCOG00000013364	EDC3	100	95.472	Propithecus_coquereli
ENSNGAG00000010923	Edc3	100	94.488	ENSPVAG00000014733	EDC3	100	94.488	Pteropus_vampyrus
ENSNGAG00000010923	Edc3	99	58.008	ENSPNYG00000009669	EDC3	99	58.008	Pundamilia_nyererei
ENSNGAG00000010923	Edc3	100	67.780	ENSPNYG00000021797	edc3	100	67.780	Pundamilia_nyererei
ENSNGAG00000010923	Edc3	100	69.844	ENSPNAG00000019657	edc3	100	69.844	Pygocentrus_nattereri
ENSNGAG00000010923	Edc3	99	96.640	ENSRNOG00000019579	Edc3	100	96.640	Rattus_norvegicus
ENSNGAG00000010923	Edc3	100	96.260	ENSRBIG00000019488	EDC3	100	96.260	Rhinopithecus_bieti
ENSNGAG00000010923	Edc3	100	96.260	ENSRROG00000034959	EDC3	100	96.260	Rhinopithecus_roxellana
ENSNGAG00000010923	Edc3	100	96.260	ENSSBOG00000004896	EDC3	100	96.260	Saimiri_boliviensis_boliviensis
ENSNGAG00000010923	Edc3	96	91.411	ENSSHAG00000015075	EDC3	95	91.411	Sarcophilus_harrisii
ENSNGAG00000010923	Edc3	100	70.039	ENSSFOG00015016939	edc3	100	70.039	Scleropages_formosus
ENSNGAG00000010923	Edc3	100	64.786	ENSSFOG00015002439	edc3	100	64.981	Scleropages_formosus
ENSNGAG00000010923	Edc3	100	68.627	ENSSMAG00000010695	edc3	100	69.352	Scophthalmus_maximus
ENSNGAG00000010923	Edc3	99	57.115	ENSSMAG00000010176	-	99	57.115	Scophthalmus_maximus
ENSNGAG00000010923	Edc3	100	59.302	ENSSDUG00000007671	EDC3	100	59.302	Seriola_dumerili
ENSNGAG00000010923	Edc3	100	69.020	ENSSDUG00000021844	edc3	100	69.941	Seriola_dumerili
ENSNGAG00000010923	Edc3	100	69.020	ENSSLDG00000022046	edc3	100	69.941	Seriola_lalandi_dorsalis
ENSNGAG00000010923	Edc3	81	96.371	ENSSARG00000003907	EDC3	80	96.371	Sorex_araneus
ENSNGAG00000010923	Edc3	100	88.189	ENSSPUG00000008232	EDC3	100	88.189	Sphenodon_punctatus
ENSNGAG00000010923	Edc3	100	69.548	ENSSPAG00000010009	edc3	100	69.548	Stegastes_partitus
ENSNGAG00000010923	Edc3	100	57.588	ENSSPAG00000020327	EDC3	100	57.588	Stegastes_partitus
ENSNGAG00000010923	Edc3	100	95.866	ENSSSCG00000001903	EDC3	100	95.866	Sus_scrofa
ENSNGAG00000010923	Edc3	100	88.189	ENSTGUG00000004007	EDC3	100	88.189	Taeniopygia_guttata
ENSNGAG00000010923	Edc3	100	69.548	ENSTRUG00000017078	edc3	100	69.548	Takifugu_rubripes
ENSNGAG00000010923	Edc3	100	68.885	ENSTNIG00000016047	edc3	100	68.885	Tetraodon_nigroviridis
ENSNGAG00000010923	Edc3	100	95.276	ENSTTRG00000007990	EDC3	100	95.276	Tursiops_truncatus
ENSNGAG00000010923	Edc3	100	95.276	ENSUAMG00000026710	-	100	95.276	Ursus_americanus
ENSNGAG00000010923	Edc3	100	95.276	ENSUMAG00000005006	EDC3	96	95.276	Ursus_maritimus
ENSNGAG00000010923	Edc3	79	85.185	ENSVPAG00000003499	-	79	85.185	Vicugna_pacos
ENSNGAG00000010923	Edc3	100	95.669	ENSVVUG00000018601	EDC3	100	95.669	Vulpes_vulpes
ENSNGAG00000010923	Edc3	68	81.322	ENSXETG00000010622	edc3	99	82.471	Xenopus_tropicalis
ENSNGAG00000010923	Edc3	100	69.745	ENSXMAG00000007377	edc3	100	69.745	Xiphophorus_maculatus