EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011066 (Gene tree)
Gene ID: 103735181
Gene Symbol: Rpp38
Alias: C330006A15Rik
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 4869 bases
Position: chrKL201044.1:165651-170519
Accession: 103735181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000007953	Ribosomal_L7Ae	PF01248.26	6.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000013445	-	1571	XM_008834332	ENSNGAP00000007953	285 (aa)	XP_008832554	UPI0004ED2C01

Gene Model

Click here to download ENSNGAG00000011066's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG
ngi03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011066	Rpp38	100	75.789	ENSG00000152464	RPP38	100	78.571	Homo_sapiens
ENSNGAG00000011066	Rpp38	94	44.000	ENSAPOG00000001240	rpp38	96	43.571	Acanthochromis_polyacanthus
ENSNGAG00000011066	Rpp38	100	74.737	ENSAMEG00000018832	RPP38	100	75.088	Ailuropoda_melanoleuca
ENSNGAG00000011066	Rpp38	88	44.141	ENSACIG00000011592	rpp38	92	43.866	Amphilophus_citrinellus
ENSNGAG00000011066	Rpp38	94	42.014	ENSAOCG00000017293	rpp38	97	41.980	Amphiprion_ocellaris
ENSNGAG00000011066	Rpp38	94	43.214	ENSAPEG00000002315	rpp38	96	43.158	Amphiprion_percula
ENSNGAG00000011066	Rpp38	96	45.833	ENSATEG00000000731	rpp38	98	45.139	Anabas_testudineus
ENSNGAG00000011066	Rpp38	92	48.106	ENSAPLG00000002054	RPP38	96	48.718	Anas_platyrhynchos
ENSNGAG00000011066	Rpp38	94	44.000	ENSACLG00000016962	rpp38	97	45.070	Astatotilapia_calliptera
ENSNGAG00000011066	Rpp38	94	44.364	ENSACLG00000016958	rpp38	97	45.745	Astatotilapia_calliptera
ENSNGAG00000011066	Rpp38	89	40.551	ENSAMXG00000025023	rpp38	94	41.328	Astyanax_mexicanus
ENSNGAG00000011066	Rpp38	100	70.526	ENSBTAG00000007702	RPP38	100	70.526	Bos_taurus
ENSNGAG00000011066	Rpp38	100	71.930	ENSCAFG00000024373	RPP38	100	72.281	Canis_familiaris
ENSNGAG00000011066	Rpp38	100	71.930	ENSCAFG00020008008	RPP38	100	72.281	Canis_lupus_dingo
ENSNGAG00000011066	Rpp38	100	70.175	ENSCHIG00000012484	RPP38	100	70.175	Capra_hircus
ENSNGAG00000011066	Rpp38	100	74.386	ENSCPOG00000003981	RPP38	100	74.386	Cavia_porcellus
ENSNGAG00000011066	Rpp38	100	77.544	ENSCLAG00000010194	RPP38	100	77.544	Chinchilla_lanigera
ENSNGAG00000011066	Rpp38	94	76.404	ENSCSAG00000019055	RPP38	100	76.140	Chlorocebus_sabaeus
ENSNGAG00000011066	Rpp38	100	77.193	ENSCHOG00000004335	RPP38	100	77.193	Choloepus_hoffmanni
ENSNGAG00000011066	Rpp38	100	72.632	ENSCGRG00001001395	Rpp38	100	75.439	Cricetulus_griseus_chok1gshd
ENSNGAG00000011066	Rpp38	100	72.632	ENSCGRG00000017441	Rpp38	100	75.439	Cricetulus_griseus_crigri
ENSNGAG00000011066	Rpp38	94	42.238	ENSCSEG00000001721	rpp38	98	42.606	Cynoglossus_semilaevis
ENSNGAG00000011066	Rpp38	95	42.403	ENSCVAG00000001676	rpp38	97	45.296	Cyprinodon_variegatus
ENSNGAG00000011066	Rpp38	90	45.896	ENSDARG00000040350	rpp38	95	45.390	Danio_rerio
ENSNGAG00000011066	Rpp38	100	74.035	ENSDNOG00000040314	RPP38	100	74.035	Dasypus_novemcinctus
ENSNGAG00000011066	Rpp38	100	68.421	ENSDORG00000009783	Rpp38	100	68.421	Dipodomys_ordii
ENSNGAG00000011066	Rpp38	100	72.281	ENSETEG00000002839	RPP38	100	72.281	Echinops_telfairi
ENSNGAG00000011066	Rpp38	99	73.852	ENSEASG00005019783	RPP38	98	73.852	Equus_asinus_asinus
ENSNGAG00000011066	Rpp38	100	67.719	ENSEEUG00000014677	RPP38	100	67.719	Erinaceus_europaeus
ENSNGAG00000011066	Rpp38	88	45.620	ENSELUG00000010160	rpp38	94	46.127	Esox_lucius
ENSNGAG00000011066	Rpp38	100	70.526	ENSFCAG00000022449	RPP38	100	70.526	Felis_catus
ENSNGAG00000011066	Rpp38	91	51.341	ENSFALG00000014804	RPP38	93	52.381	Ficedula_albicollis
ENSNGAG00000011066	Rpp38	100	76.140	ENSFDAG00000018669	RPP38	100	76.140	Fukomys_damarensis
ENSNGAG00000011066	Rpp38	95	42.123	ENSFHEG00000013741	rpp38	99	42.623	Fundulus_heteroclitus
ENSNGAG00000011066	Rpp38	92	46.565	ENSGALG00000008794	RPP38	91	47.426	Gallus_gallus
ENSNGAG00000011066	Rpp38	58	50.595	ENSGACG00000009258	rpp38	98	48.485	Gasterosteus_aculeatus
ENSNGAG00000011066	Rpp38	94	44.322	ENSHBUG00000010937	rpp38	97	45.357	Haplochromis_burtoni
ENSNGAG00000011066	Rpp38	100	73.333	ENSHGLG00000012144	RPP38	100	73.333	Heterocephalus_glaber_female
ENSNGAG00000011066	Rpp38	88	40.239	ENSIPUG00000022879	rpp38	90	42.578	Ictalurus_punctatus
ENSNGAG00000011066	Rpp38	100	73.333	ENSSTOG00000025699	RPP38	98	73.333	Ictidomys_tridecemlineatus
ENSNGAG00000011066	Rpp38	100	79.649	ENSJJAG00000007523	Rpp38	100	78.947	Jaculus_jaculus
ENSNGAG00000011066	Rpp38	88	45.522	ENSKMAG00000003986	rpp38	89	44.944	Kryptolebias_marmoratus
ENSNGAG00000011066	Rpp38	92	45.896	ENSLBEG00000006853	rpp38	94	45.896	Labrus_bergylta
ENSNGAG00000011066	Rpp38	95	52.448	ENSLACG00000006502	RPP38	100	52.667	Latimeria_chalumnae
ENSNGAG00000011066	Rpp38	93	44.689	ENSLOCG00000018347	rpp38	93	45.055	Lepisosteus_oculatus
ENSNGAG00000011066	Rpp38	100	75.088	ENSLAFG00000000509	RPP38	100	75.088	Loxodonta_africana
ENSNGAG00000011066	Rpp38	94	76.404	ENSMMUG00000007679	RPP38	100	76.140	Macaca_mulatta
ENSNGAG00000011066	Rpp38	96	44.803	ENSMAMG00000012774	rpp38	96	44.444	Mastacembelus_armatus
ENSNGAG00000011066	Rpp38	94	44.364	ENSMZEG00005003200	rpp38	97	45.745	Maylandia_zebra
ENSNGAG00000011066	Rpp38	94	44.364	ENSMZEG00005003189	rpp38	97	46.099	Maylandia_zebra
ENSNGAG00000011066	Rpp38	92	46.565	ENSMGAG00000008217	RPP38	91	47.426	Meleagris_gallopavo
ENSNGAG00000011066	Rpp38	100	75.088	ENSMAUG00000003644	Rpp38	100	76.491	Mesocricetus_auratus
ENSNGAG00000011066	Rpp38	100	77.895	ENSMOCG00000007020	Rpp38	100	77.193	Microtus_ochrogaster
ENSNGAG00000011066	Rpp38	94	43.571	ENSMMOG00000003446	rpp38	96	45.000	Mola_mola
ENSNGAG00000011066	Rpp38	95	62.500	ENSMODG00000024091	RPP38	100	62.587	Monodelphis_domestica
ENSNGAG00000011066	Rpp38	91	41.026	ENSMALG00000002356	rpp38	93	41.026	Monopterus_albus
ENSNGAG00000011066	Rpp38	100	79.649	MGP_CAROLIEiJ_G0023133	Rpp38	100	79.649	Mus_caroli
ENSNGAG00000011066	Rpp38	100	78.947	ENSMUSG00000049950	Rpp38	100	78.947	Mus_musculus
ENSNGAG00000011066	Rpp38	100	79.298	MGP_PahariEiJ_G0019193	Rpp38	100	79.298	Mus_pahari
ENSNGAG00000011066	Rpp38	100	78.596	MGP_SPRETEiJ_G0024051	Rpp38	100	78.596	Mus_spretus
ENSNGAG00000011066	Rpp38	99	72.695	ENSMPUG00000018523	RPP38	99	73.050	Mustela_putorius_furo
ENSNGAG00000011066	Rpp38	94	75.281	ENSMLUG00000002153	RPP38	100	75.439	Myotis_lucifugus
ENSNGAG00000011066	Rpp38	94	44.727	ENSNBRG00000006994	rpp38	98	45.357	Neolamprologus_brichardi
ENSNGAG00000011066	Rpp38	94	44.364	ENSONIG00000020467	rpp38	96	45.357	Oreochromis_niloticus
ENSNGAG00000011066	Rpp38	94	70.787	ENSOCUG00000022768	-	100	71.228	Oryctolagus_cuniculus
ENSNGAG00000011066	Rpp38	94	70.787	ENSOCUG00000024367	-	100	71.228	Oryctolagus_cuniculus
ENSNGAG00000011066	Rpp38	88	43.182	ENSORLG00000009219	rpp38	96	41.818	Oryzias_latipes
ENSNGAG00000011066	Rpp38	88	43.750	ENSORLG00020011503	rpp38	90	42.910	Oryzias_latipes_hni
ENSNGAG00000011066	Rpp38	93	41.852	ENSORLG00015017702	rpp38	94	41.696	Oryzias_latipes_hsok
ENSNGAG00000011066	Rpp38	88	43.798	ENSOMEG00000005414	rpp38	99	43.103	Oryzias_melastigma
ENSNGAG00000011066	Rpp38	100	73.684	ENSOGAG00000008059	RPP38	100	73.684	Otolemur_garnettii
ENSNGAG00000011066	Rpp38	100	70.526	ENSOARG00000004534	RPP38	100	70.526	Ovis_aries
ENSNGAG00000011066	Rpp38	100	75.789	ENSPPAG00000041577	RPP38	91	75.789	Pan_paniscus
ENSNGAG00000011066	Rpp38	100	70.526	ENSPPRG00000015329	RPP38	100	70.877	Panthera_pardus
ENSNGAG00000011066	Rpp38	100	70.175	ENSPTIG00000007188	RPP38	100	70.526	Panthera_tigris_altaica
ENSNGAG00000011066	Rpp38	100	76.140	ENSPTRG00000002318	RPP38	91	76.140	Pan_troglodytes
ENSNGAG00000011066	Rpp38	94	44.765	ENSPKIG00000025652	rpp38	95	43.885	Paramormyrops_kingsleyae
ENSNGAG00000011066	Rpp38	96	55.957	ENSPSIG00000001527	RPP38	97	55.235	Pelodiscus_sinensis
ENSNGAG00000011066	Rpp38	100	76.842	ENSPEMG00000008375	Rpp38	100	77.895	Peromyscus_maniculatus_bairdii
ENSNGAG00000011066	Rpp38	100	65.734	ENSPCIG00000009096	RPP38	94	65.734	Phascolarctos_cinereus
ENSNGAG00000011066	Rpp38	68	45.226	ENSPFOG00000016823	rpp38	91	45.226	Poecilia_formosa
ENSNGAG00000011066	Rpp38	89	43.130	ENSPLAG00000007626	rpp38	91	42.105	Poecilia_latipinna
ENSNGAG00000011066	Rpp38	87	39.689	ENSPMEG00000020392	rpp38	93	38.603	Poecilia_mexicana
ENSNGAG00000011066	Rpp38	89	42.366	ENSPREG00000017744	rpp38	93	41.353	Poecilia_reticulata
ENSNGAG00000011066	Rpp38	100	75.789	ENSPPYG00000002113	RPP38	100	75.789	Pongo_abelii
ENSNGAG00000011066	Rpp38	94	73.783	ENSPVAG00000007155	RPP38	100	74.035	Pteropus_vampyrus
ENSNGAG00000011066	Rpp38	94	44.364	ENSPNYG00000004293	rpp38	97	46.099	Pundamilia_nyererei
ENSNGAG00000011066	Rpp38	88	41.961	ENSPNAG00000010633	rpp38	99	42.199	Pygocentrus_nattereri
ENSNGAG00000011066	Rpp38	98	76.071	ENSRNOG00000038025	Rpp38	99	74.643	Rattus_norvegicus
ENSNGAG00000011066	Rpp38	100	65.035	ENSSHAG00000015529	RPP38	100	65.385	Sarcophilus_harrisii
ENSNGAG00000011066	Rpp38	94	45.520	ENSSMAG00000018276	rpp38	95	45.161	Scophthalmus_maximus
ENSNGAG00000011066	Rpp38	94	44.565	ENSSDUG00000001651	rpp38	98	44.718	Seriola_dumerili
ENSNGAG00000011066	Rpp38	94	44.803	ENSSLDG00000014355	rpp38	98	44.406	Seriola_lalandi_dorsalis
ENSNGAG00000011066	Rpp38	100	54.035	ENSSARG00000012099	RPP38	100	53.684	Sorex_araneus
ENSNGAG00000011066	Rpp38	99	52.613	ENSSPUG00000018363	-	99	52.613	Sphenodon_punctatus
ENSNGAG00000011066	Rpp38	100	53.287	ENSSPUG00000005237	-	100	53.287	Sphenodon_punctatus
ENSNGAG00000011066	Rpp38	97	50.896	ENSSPUG00000008560	-	99	50.179	Sphenodon_punctatus
ENSNGAG00000011066	Rpp38	94	42.336	ENSSPAG00000020387	rpp38	96	42.652	Stegastes_partitus
ENSNGAG00000011066	Rpp38	100	67.708	ENSSSCG00000027110	RPP38	100	67.708	Sus_scrofa
ENSNGAG00000011066	Rpp38	91	50.958	ENSTGUG00000001366	RPP38	96	51.282	Taeniopygia_guttata
ENSNGAG00000011066	Rpp38	94	43.956	ENSTNIG00000001334	rpp38	96	43.956	Tetraodon_nigroviridis
ENSNGAG00000011066	Rpp38	100	68.772	ENSTTRG00000004420	RPP38	100	68.772	Tursiops_truncatus
ENSNGAG00000011066	Rpp38	100	74.386	ENSUAMG00000002618	RPP38	100	74.737	Ursus_americanus
ENSNGAG00000011066	Rpp38	100	74.476	ENSUMAG00000012382	RPP38	100	75.175	Ursus_maritimus
ENSNGAG00000011066	Rpp38	100	71.579	ENSVVUG00000005272	RPP38	100	71.930	Vulpes_vulpes
ENSNGAG00000011066	Rpp38	92	47.985	ENSXETG00000003419	rpp38	97	48.582	Xenopus_tropicalis