EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011135 (Gene tree)
Gene ID: 103727978
Gene Symbol: Rc3h1
Alias: 5730557L09Rik|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 82101 bases
Position: chrKL205491.1:231687-313787
Accession: 103727978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000008084	zf-CCCH	PF00642.24	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000013578	-	4642	XM_008826093	ENSNGAP00000008084	1130 (aa)	XP_008824315	UPI0004ECFEB7

Gene Model

Click here to download ENSNGAG00000011135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011135	Rc3h1	100	95.410	ENSG00000135870	RC3H1	100	95.852	Homo_sapiens
ENSNGAG00000011135	Rc3h1	100	95.583	ENSAMEG00000015657	RC3H1	100	95.583	Ailuropoda_melanoleuca
ENSNGAG00000011135	Rc3h1	100	87.074	ENSAPLG00000005341	RC3H1	100	86.538	Anas_platyrhynchos
ENSNGAG00000011135	Rc3h1	100	84.441	ENSACAG00000015271	RC3H1	100	84.238	Anolis_carolinensis
ENSNGAG00000011135	Rc3h1	100	95.234	ENSANAG00000036716	RC3H1	100	95.763	Aotus_nancymaae
ENSNGAG00000011135	Rc3h1	100	93.822	ENSBTAG00000052708	RC3H1	100	94.263	Bos_taurus
ENSNGAG00000011135	Rc3h1	100	95.057	ENSCJAG00000009106	RC3H1	100	95.587	Callithrix_jacchus
ENSNGAG00000011135	Rc3h1	100	95.318	ENSCAFG00000014434	RC3H1	100	95.760	Canis_familiaris
ENSNGAG00000011135	Rc3h1	100	95.234	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSNGAG00000011135	Rc3h1	100	94.258	ENSCHIG00000002873	RC3H1	100	94.700	Capra_hircus
ENSNGAG00000011135	Rc3h1	99	94.081	ENSTSYG00000003913	RC3H1	99	94.435	Carlito_syrichta
ENSNGAG00000011135	Rc3h1	100	91.254	ENSCPOG00000004349	RC3H1	100	91.254	Cavia_porcellus
ENSNGAG00000011135	Rc3h1	100	93.116	ENSCCAG00000025652	RC3H1	100	93.645	Cebus_capucinus
ENSNGAG00000011135	Rc3h1	100	95.499	ENSCATG00000033497	RC3H1	100	95.940	Cercocebus_atys
ENSNGAG00000011135	Rc3h1	100	93.998	ENSCLAG00000011267	RC3H1	100	94.351	Chinchilla_lanigera
ENSNGAG00000011135	Rc3h1	96	95.304	ENSCSAG00000011823	RC3H1	85	95.764	Chlorocebus_sabaeus
ENSNGAG00000011135	Rc3h1	100	88.762	ENSCPBG00000014670	RC3H1	100	88.235	Chrysemys_picta_bellii
ENSNGAG00000011135	Rc3h1	100	95.944	ENSCANG00000032120	RC3H1	100	95.944	Colobus_angolensis_palliatus
ENSNGAG00000011135	Rc3h1	100	96.637	ENSCGRG00001020812	Rc3h1	100	96.637	Cricetulus_griseus_chok1gshd
ENSNGAG00000011135	Rc3h1	100	96.637	ENSCGRG00000011952	Rc3h1	100	96.637	Cricetulus_griseus_crigri
ENSNGAG00000011135	Rc3h1	55	92.122	ENSDNOG00000011494	RC3H1	99	92.926	Dasypus_novemcinctus
ENSNGAG00000011135	Rc3h1	100	94.611	ENSDORG00000004855	Rc3h1	100	94.523	Dipodomys_ordii
ENSNGAG00000011135	Rc3h1	81	95.318	ENSETEG00000012064	RC3H1	87	95.318	Echinops_telfairi
ENSNGAG00000011135	Rc3h1	100	93.905	ENSEASG00005017000	RC3H1	100	94.258	Equus_asinus_asinus
ENSNGAG00000011135	Rc3h1	100	93.728	ENSECAG00000021208	RC3H1	100	94.081	Equus_caballus
ENSNGAG00000011135	Rc3h1	89	82.746	ENSEEUG00000014861	RC3H1	93	82.746	Erinaceus_europaeus
ENSNGAG00000011135	Rc3h1	100	96.028	ENSFCAG00000014924	RC3H1	100	96.028	Felis_catus
ENSNGAG00000011135	Rc3h1	100	85.914	ENSFALG00000002947	RC3H1	100	85.289	Ficedula_albicollis
ENSNGAG00000011135	Rc3h1	100	94.440	ENSFDAG00000013303	RC3H1	100	94.704	Fukomys_damarensis
ENSNGAG00000011135	Rc3h1	100	86.204	ENSGALG00000004587	RC3H1	100	85.664	Gallus_gallus
ENSNGAG00000011135	Rc3h1	100	87.006	ENSGAGG00000018194	RC3H1	100	86.831	Gopherus_agassizii
ENSNGAG00000011135	Rc3h1	100	89.094	ENSGGOG00000005735	RC3H1	100	89.094	Gorilla_gorilla
ENSNGAG00000011135	Rc3h1	88	88.092	ENSHGLG00000004183	-	100	88.092	Heterocephalus_glaber_female
ENSNGAG00000011135	Rc3h1	100	93.469	ENSHGLG00100008577	RC3H1	100	93.822	Heterocephalus_glaber_male
ENSNGAG00000011135	Rc3h1	100	95.406	ENSSTOG00000016033	RC3H1	100	95.848	Ictidomys_tridecemlineatus
ENSNGAG00000011135	Rc3h1	100	95.402	ENSJJAG00000018915	Rc3h1	100	95.402	Jaculus_jaculus
ENSNGAG00000011135	Rc3h1	100	74.717	ENSLACG00000016186	RC3H1	100	78.151	Latimeria_chalumnae
ENSNGAG00000011135	Rc3h1	97	95.716	ENSLAFG00000004367	RC3H1	100	96.171	Loxodonta_africana
ENSNGAG00000011135	Rc3h1	100	95.410	ENSMFAG00000033725	RC3H1	100	95.852	Macaca_fascicularis
ENSNGAG00000011135	Rc3h1	100	95.322	ENSMMUG00000000630	RC3H1	100	95.763	Macaca_mulatta
ENSNGAG00000011135	Rc3h1	100	95.499	ENSMNEG00000035968	RC3H1	100	95.940	Macaca_nemestrina
ENSNGAG00000011135	Rc3h1	100	95.410	ENSMLEG00000037455	RC3H1	100	95.852	Mandrillus_leucophaeus
ENSNGAG00000011135	Rc3h1	88	96.465	ENSMAUG00000020864	Rc3h1	93	96.465	Mesocricetus_auratus
ENSNGAG00000011135	Rc3h1	100	95.583	ENSMICG00000003000	RC3H1	100	96.025	Microcebus_murinus
ENSNGAG00000011135	Rc3h1	93	95.347	ENSMOCG00000016587	Rc3h1	98	95.347	Microtus_ochrogaster
ENSNGAG00000011135	Rc3h1	100	91.182	ENSMODG00000004289	RC3H1	100	91.270	Monodelphis_domestica
ENSNGAG00000011135	Rc3h1	100	95.487	MGP_CAROLIEiJ_G0014756	Rc3h1	100	95.487	Mus_caroli
ENSNGAG00000011135	Rc3h1	100	95.310	ENSMUSG00000040423	Rc3h1	100	95.310	Mus_musculus
ENSNGAG00000011135	Rc3h1	100	95.133	MGP_PahariEiJ_G0027992	Rc3h1	100	95.133	Mus_pahari
ENSNGAG00000011135	Rc3h1	100	95.133	MGP_SPRETEiJ_G0015563	Rc3h1	100	95.133	Mus_spretus
ENSNGAG00000011135	Rc3h1	100	95.495	ENSMPUG00000004747	RC3H1	100	95.495	Mustela_putorius_furo
ENSNGAG00000011135	Rc3h1	100	94.430	ENSMLUG00000011127	RC3H1	100	94.872	Myotis_lucifugus
ENSNGAG00000011135	Rc3h1	100	95.499	ENSNLEG00000015327	RC3H1	100	95.940	Nomascus_leucogenys
ENSNGAG00000011135	Rc3h1	99	81.593	ENSOPRG00000013068	RC3H1	99	81.681	Ochotona_princeps
ENSNGAG00000011135	Rc3h1	100	93.822	ENSODEG00000014185	RC3H1	100	93.822	Octodon_degus
ENSNGAG00000011135	Rc3h1	100	90.131	ENSOANG00000000924	RC3H1	100	90.306	Ornithorhynchus_anatinus
ENSNGAG00000011135	Rc3h1	99	94.803	ENSOCUG00000004930	RC3H1	98	95.251	Oryctolagus_cuniculus
ENSNGAG00000011135	Rc3h1	100	88.536	ENSOGAG00000004044	RC3H1	100	88.801	Otolemur_garnettii
ENSNGAG00000011135	Rc3h1	100	94.386	ENSOARG00000013011	RC3H1	100	94.825	Ovis_aries
ENSNGAG00000011135	Rc3h1	100	95.414	ENSPPAG00000039253	RC3H1	100	95.855	Pan_paniscus
ENSNGAG00000011135	Rc3h1	100	95.053	ENSPPRG00000009007	RC3H1	100	95.495	Panthera_pardus
ENSNGAG00000011135	Rc3h1	100	95.251	ENSPTIG00000015326	RC3H1	100	95.866	Panthera_tigris_altaica
ENSNGAG00000011135	Rc3h1	100	95.414	ENSPTRG00000001702	RC3H1	100	95.855	Pan_troglodytes
ENSNGAG00000011135	Rc3h1	100	95.410	ENSPANG00000008886	RC3H1	100	95.852	Papio_anubis
ENSNGAG00000011135	Rc3h1	100	88.772	ENSPSIG00000016181	RC3H1	100	88.684	Pelodiscus_sinensis
ENSNGAG00000011135	Rc3h1	100	96.106	ENSPEMG00000011966	Rc3h1	100	96.106	Peromyscus_maniculatus_bairdii
ENSNGAG00000011135	Rc3h1	70	93.790	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSNGAG00000011135	Rc3h1	100	92.586	ENSPPYG00000000490	RC3H1	98	94.928	Pongo_abelii
ENSNGAG00000011135	Rc3h1	81	97.368	ENSPCAG00000010775	RC3H1	87	97.368	Procavia_capensis
ENSNGAG00000011135	Rc3h1	83	94.545	ENSPCOG00000021795	RC3H1	96	95.080	Propithecus_coquereli
ENSNGAG00000011135	Rc3h1	100	86.572	ENSPVAG00000007593	RC3H1	100	86.837	Pteropus_vampyrus
ENSNGAG00000011135	Rc3h1	97	61.450	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSNGAG00000011135	Rc3h1	100	95.944	ENSRBIG00000037743	RC3H1	100	95.944	Rhinopithecus_bieti
ENSNGAG00000011135	Rc3h1	100	95.410	ENSRROG00000036546	RC3H1	100	95.852	Rhinopithecus_roxellana
ENSNGAG00000011135	Rc3h1	93	85.364	ENSSBOG00000010664	RC3H1	100	89.678	Saimiri_boliviensis_boliviensis
ENSNGAG00000011135	Rc3h1	100	90.308	ENSSHAG00000007589	RC3H1	100	90.396	Sarcophilus_harrisii
ENSNGAG00000011135	Rc3h1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSNGAG00000011135	Rc3h1	100	83.173	ENSSPUG00000018472	RC3H1	100	83.509	Sphenodon_punctatus
ENSNGAG00000011135	Rc3h1	100	95.583	ENSSSCG00000015498	RC3H1	100	96.025	Sus_scrofa
ENSNGAG00000011135	Rc3h1	100	86.631	ENSTGUG00000004090	RC3H1	100	85.915	Taeniopygia_guttata
ENSNGAG00000011135	Rc3h1	89	95.913	ENSTBEG00000005015	RC3H1	89	95.913	Tupaia_belangeri
ENSNGAG00000011135	Rc3h1	100	94.802	ENSTTRG00000008572	RC3H1	100	95.242	Tursiops_truncatus
ENSNGAG00000011135	Rc3h1	100	95.230	ENSUAMG00000019525	RC3H1	100	95.230	Ursus_americanus
ENSNGAG00000011135	Rc3h1	100	95.587	ENSUMAG00000020087	RC3H1	100	95.587	Ursus_maritimus
ENSNGAG00000011135	Rc3h1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSNGAG00000011135	Rc3h1	100	94.982	ENSVVUG00000014201	RC3H1	100	95.423	Vulpes_vulpes
ENSNGAG00000011135	Rc3h1	100	78.242	ENSXETG00000020030	rc3h1	100	77.981	Xenopus_tropicalis