EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011186 (Gene tree)
Gene ID: 103744569
Gene Symbol: Snd1
Alias: Tudor-SN|p100 co-activator
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 462297 bases
Position: chrKL203089.1:2434401-2896697
Accession: 103744569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000008110	TUDOR	PF00567.24	5e-28	1	1
ENSNGAP00000008110	SNase	PF00565.17	1.1e-68	1	5
ENSNGAP00000008110	SNase	PF00565.17	1.1e-68	2	5
ENSNGAP00000008110	SNase	PF00565.17	1.1e-68	3	5
ENSNGAP00000008110	SNase	PF00565.17	1.1e-68	4	5
ENSNGAP00000008110	SNase	PF00565.17	1.1e-68	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000013604	-	3635	XM_008846394	ENSNGAP00000008110	910 (aa)	XP_008844616	UPI0004ED2311

Gene Model

Click here to download ENSNGAG00000011186's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011186	Snd1	100	97.912	ENSG00000197157	SND1	100	97.912	Homo_sapiens
ENSNGAG00000011186	Snd1	100	83.662	ENSAPOG00000017599	snd1	99	84.538	Acanthochromis_polyacanthus
ENSNGAG00000011186	Snd1	100	97.588	ENSAMEG00000004664	SND1	94	97.588	Ailuropoda_melanoleuca
ENSNGAG00000011186	Snd1	98	81.971	ENSACIG00000003551	snd1	99	81.849	Amphilophus_citrinellus
ENSNGAG00000011186	Snd1	100	83.443	ENSAOCG00000014166	snd1	99	84.316	Amphiprion_ocellaris
ENSNGAG00000011186	Snd1	100	83.443	ENSAPEG00000007067	snd1	99	84.316	Amphiprion_percula
ENSNGAG00000011186	Snd1	98	82.793	ENSATEG00000018475	snd1	88	84.036	Anabas_testudineus
ENSNGAG00000011186	Snd1	100	98.352	ENSANAG00000034463	SND1	100	98.352	Aotus_nancymaae
ENSNGAG00000011186	Snd1	99	82.967	ENSACLG00000022897	snd1	99	83.964	Astatotilapia_calliptera
ENSNGAG00000011186	Snd1	99	84.378	ENSAMXG00000016318	snd1	98	84.967	Astyanax_mexicanus
ENSNGAG00000011186	Snd1	100	98.132	ENSBTAG00000010692	SND1	100	98.132	Bos_taurus
ENSNGAG00000011186	Snd1	98	46.762	WBGene00006626	tsn-1	98	47.201	Caenorhabditis_elegans
ENSNGAG00000011186	Snd1	100	97.912	ENSCJAG00000017668	SND1	100	97.912	Callithrix_jacchus
ENSNGAG00000011186	Snd1	100	98.022	ENSCAFG00000001700	SND1	100	98.022	Canis_familiaris
ENSNGAG00000011186	Snd1	100	98.022	ENSCAFG00020021639	SND1	100	98.022	Canis_lupus_dingo
ENSNGAG00000011186	Snd1	100	98.242	ENSCHIG00000023390	SND1	100	98.242	Capra_hircus
ENSNGAG00000011186	Snd1	73	98.239	ENSTSYG00000004979	SND1	96	98.239	Carlito_syrichta
ENSNGAG00000011186	Snd1	99	84.889	ENSCAPG00000010677	SND1	98	84.933	Cavia_aperea
ENSNGAG00000011186	Snd1	100	97.912	ENSCPOG00000006251	SND1	100	97.912	Cavia_porcellus
ENSNGAG00000011186	Snd1	100	98.242	ENSCCAG00000036847	SND1	100	98.242	Cebus_capucinus
ENSNGAG00000011186	Snd1	100	98.132	ENSCATG00000035214	SND1	100	98.132	Cercocebus_atys
ENSNGAG00000011186	Snd1	100	98.022	ENSCLAG00000011796	SND1	100	98.022	Chinchilla_lanigera
ENSNGAG00000011186	Snd1	100	98.132	ENSCSAG00000010182	SND1	100	98.132	Chlorocebus_sabaeus
ENSNGAG00000011186	Snd1	77	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSNGAG00000011186	Snd1	100	91.429	ENSCPBG00000018094	SND1	98	92.377	Chrysemys_picta_bellii
ENSNGAG00000011186	Snd1	98	56.858	ENSCING00000000524	-	98	56.858	Ciona_intestinalis
ENSNGAG00000011186	Snd1	99	57.756	ENSCSAVG00000008807	-	99	57.901	Ciona_savignyi
ENSNGAG00000011186	Snd1	100	98.132	ENSCANG00000035119	SND1	100	98.132	Colobus_angolensis_palliatus
ENSNGAG00000011186	Snd1	100	98.022	ENSCGRG00001022514	Snd1	100	98.022	Cricetulus_griseus_chok1gshd
ENSNGAG00000011186	Snd1	97	98.077	ENSCGRG00000012277	Snd1	99	98.077	Cricetulus_griseus_crigri
ENSNGAG00000011186	Snd1	98	84.116	ENSCSEG00000008661	snd1	98	84.116	Cynoglossus_semilaevis
ENSNGAG00000011186	Snd1	100	83.882	ENSCVAG00000010316	snd1	100	83.563	Cyprinodon_variegatus
ENSNGAG00000011186	Snd1	100	84.228	ENSDARG00000006766	snd1	97	87.410	Danio_rerio
ENSNGAG00000011186	Snd1	97	95.039	ENSDNOG00000006795	SND1	100	95.039	Dasypus_novemcinctus
ENSNGAG00000011186	Snd1	100	98.462	ENSDORG00000000336	Snd1	100	98.462	Dipodomys_ordii
ENSNGAG00000011186	Snd1	98	50.595	FBgn0035121	Tudor-SN	98	50.704	Drosophila_melanogaster
ENSNGAG00000011186	Snd1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSNGAG00000011186	Snd1	57	67.838	ENSEBUG00000014201	-	84	76.503	Eptatretus_burgeri
ENSNGAG00000011186	Snd1	100	96.436	ENSEASG00005008513	SND1	100	96.436	Equus_asinus_asinus
ENSNGAG00000011186	Snd1	100	98.022	ENSECAG00000011451	SND1	100	98.022	Equus_caballus
ENSNGAG00000011186	Snd1	100	86.593	ENSEEUG00000014737	SND1	100	86.593	Erinaceus_europaeus
ENSNGAG00000011186	Snd1	99	82.346	ENSELUG00000001805	snd1	95	83.278	Esox_lucius
ENSNGAG00000011186	Snd1	100	98.022	ENSFCAG00000008289	SND1	100	98.022	Felis_catus
ENSNGAG00000011186	Snd1	100	98.022	ENSFDAG00000015881	SND1	100	98.022	Fukomys_damarensis
ENSNGAG00000011186	Snd1	99	81.985	ENSFHEG00000004093	snd1	97	84.517	Fundulus_heteroclitus
ENSNGAG00000011186	Snd1	64	73.729	ENSGMOG00000018932	snd1	64	73.729	Gadus_morhua
ENSNGAG00000011186	Snd1	100	84.101	ENSGAFG00000008421	snd1	99	85.006	Gambusia_affinis
ENSNGAG00000011186	Snd1	100	53.855	ENSGACG00000019793	snd1	98	54.245	Gasterosteus_aculeatus
ENSNGAG00000011186	Snd1	100	98.132	ENSGGOG00000009614	SND1	100	98.132	Gorilla_gorilla
ENSNGAG00000011186	Snd1	99	83.480	ENSHBUG00000019135	snd1	99	83.964	Haplochromis_burtoni
ENSNGAG00000011186	Snd1	100	97.802	ENSHGLG00000003618	SND1	100	97.802	Heterocephalus_glaber_female
ENSNGAG00000011186	Snd1	99	97.348	ENSHGLG00100012449	SND1	100	97.348	Heterocephalus_glaber_male
ENSNGAG00000011186	Snd1	100	82.785	ENSHCOG00000005266	snd1	98	84.004	Hippocampus_comes
ENSNGAG00000011186	Snd1	100	82.823	ENSIPUG00000013279	snd1	98	83.853	Ictalurus_punctatus
ENSNGAG00000011186	Snd1	100	98.462	ENSSTOG00000002140	SND1	100	98.462	Ictidomys_tridecemlineatus
ENSNGAG00000011186	Snd1	100	98.681	ENSJJAG00000009561	Snd1	100	98.681	Jaculus_jaculus
ENSNGAG00000011186	Snd1	100	83.662	ENSKMAG00000016997	snd1	98	84.676	Kryptolebias_marmoratus
ENSNGAG00000011186	Snd1	100	84.899	ENSLBEG00000013563	snd1	99	83.204	Labrus_bergylta
ENSNGAG00000011186	Snd1	99	85.226	ENSLOCG00000015537	snd1	98	85.226	Lepisosteus_oculatus
ENSNGAG00000011186	Snd1	100	97.253	ENSLAFG00000009696	SND1	100	97.253	Loxodonta_africana
ENSNGAG00000011186	Snd1	100	98.132	ENSMFAG00000038114	SND1	100	98.132	Macaca_fascicularis
ENSNGAG00000011186	Snd1	100	98.132	ENSMMUG00000015432	SND1	100	98.132	Macaca_mulatta
ENSNGAG00000011186	Snd1	100	98.132	ENSMNEG00000039808	SND1	100	98.132	Macaca_nemestrina
ENSNGAG00000011186	Snd1	100	98.022	ENSMLEG00000029040	SND1	100	98.022	Mandrillus_leucophaeus
ENSNGAG00000011186	Snd1	99	83.793	ENSMAMG00000011739	snd1	98	84.487	Mastacembelus_armatus
ENSNGAG00000011186	Snd1	99	82.967	ENSMZEG00005005681	snd1	99	83.964	Maylandia_zebra
ENSNGAG00000011186	Snd1	100	98.242	ENSMICG00000000097	SND1	100	98.242	Microcebus_murinus
ENSNGAG00000011186	Snd1	100	98.681	ENSMOCG00000005040	Snd1	100	98.681	Microtus_ochrogaster
ENSNGAG00000011186	Snd1	100	83.333	ENSMMOG00000001795	snd1	99	84.205	Mola_mola
ENSNGAG00000011186	Snd1	99	95.095	ENSMODG00000015182	SND1	99	95.095	Monodelphis_domestica
ENSNGAG00000011186	Snd1	100	83.114	ENSMALG00000012071	snd1	98	83.929	Monopterus_albus
ENSNGAG00000011186	Snd1	100	98.571	MGP_CAROLIEiJ_G0028159	Snd1	100	98.571	Mus_caroli
ENSNGAG00000011186	Snd1	100	98.352	ENSMUSG00000001424	Snd1	100	98.352	Mus_musculus
ENSNGAG00000011186	Snd1	100	98.571	MGP_PahariEiJ_G0021917	Snd1	100	98.651	Mus_pahari
ENSNGAG00000011186	Snd1	100	98.571	MGP_SPRETEiJ_G0029159	Snd1	100	98.571	Mus_spretus
ENSNGAG00000011186	Snd1	100	97.912	ENSMPUG00000006545	SND1	100	97.912	Mustela_putorius_furo
ENSNGAG00000011186	Snd1	97	96.425	ENSMLUG00000017130	SND1	99	96.425	Myotis_lucifugus
ENSNGAG00000011186	Snd1	99	82.857	ENSNBRG00000006681	snd1	99	83.853	Neolamprologus_brichardi
ENSNGAG00000011186	Snd1	100	98.022	ENSNLEG00000012263	SND1	100	98.079	Nomascus_leucogenys
ENSNGAG00000011186	Snd1	91	100.000	ENSOPRG00000013405	SND1	91	100.000	Ochotona_princeps
ENSNGAG00000011186	Snd1	100	97.912	ENSODEG00000011502	SND1	100	97.912	Octodon_degus
ENSNGAG00000011186	Snd1	99	82.857	ENSONIG00000011481	snd1	96	83.853	Oreochromis_niloticus
ENSNGAG00000011186	Snd1	98	94.032	ENSOANG00000000817	SND1	99	93.423	Ornithorhynchus_anatinus
ENSNGAG00000011186	Snd1	100	96.923	ENSOCUG00000001620	SND1	100	96.923	Oryctolagus_cuniculus
ENSNGAG00000011186	Snd1	98	83.799	ENSORLG00000015201	snd1	98	83.799	Oryzias_latipes
ENSNGAG00000011186	Snd1	98	83.911	ENSORLG00020013991	snd1	98	83.911	Oryzias_latipes_hni
ENSNGAG00000011186	Snd1	98	83.911	ENSORLG00015012436	snd1	98	83.911	Oryzias_latipes_hsok
ENSNGAG00000011186	Snd1	100	83.004	ENSOMEG00000006406	snd1	98	84.228	Oryzias_melastigma
ENSNGAG00000011186	Snd1	100	97.588	ENSOGAG00000013356	SND1	94	97.588	Otolemur_garnettii
ENSNGAG00000011186	Snd1	97	95.367	ENSOARG00000002149	SND1	100	95.367	Ovis_aries
ENSNGAG00000011186	Snd1	100	98.022	ENSPPAG00000042947	SND1	100	98.022	Pan_paniscus
ENSNGAG00000011186	Snd1	100	98.022	ENSPPRG00000004494	SND1	100	98.022	Panthera_pardus
ENSNGAG00000011186	Snd1	100	97.912	ENSPTIG00000014214	SND1	100	97.912	Panthera_tigris_altaica
ENSNGAG00000011186	Snd1	100	98.022	ENSPTRG00000023911	SND1	100	98.022	Pan_troglodytes
ENSNGAG00000011186	Snd1	97	98.077	ENSPANG00000011997	SND1	99	98.077	Papio_anubis
ENSNGAG00000011186	Snd1	99	81.808	ENSPKIG00000023494	snd1	98	82.131	Paramormyrops_kingsleyae
ENSNGAG00000011186	Snd1	92	82.635	ENSPMGG00000003629	snd1	100	82.635	Periophthalmus_magnuspinnatus
ENSNGAG00000011186	Snd1	100	98.791	ENSPEMG00000010240	Snd1	100	98.791	Peromyscus_maniculatus_bairdii
ENSNGAG00000011186	Snd1	97	73.559	ENSPMAG00000007915	-	99	73.559	Petromyzon_marinus
ENSNGAG00000011186	Snd1	99	95.318	ENSPCIG00000011561	SND1	99	95.318	Phascolarctos_cinereus
ENSNGAG00000011186	Snd1	100	83.553	ENSPFOG00000001557	snd1	99	84.427	Poecilia_formosa
ENSNGAG00000011186	Snd1	100	83.553	ENSPLAG00000018459	snd1	96	84.427	Poecilia_latipinna
ENSNGAG00000011186	Snd1	100	83.991	ENSPMEG00000006803	snd1	99	84.872	Poecilia_mexicana
ENSNGAG00000011186	Snd1	100	83.882	ENSPREG00000002189	snd1	99	84.761	Poecilia_reticulata
ENSNGAG00000011186	Snd1	93	97.891	ENSPPYG00000017972	SND1	100	97.891	Pongo_abelii
ENSNGAG00000011186	Snd1	100	85.604	ENSPCAG00000011305	SND1	99	85.507	Procavia_capensis
ENSNGAG00000011186	Snd1	100	97.912	ENSPCOG00000026791	SND1	100	97.912	Propithecus_coquereli
ENSNGAG00000011186	Snd1	100	96.154	ENSPVAG00000013945	SND1	100	96.154	Pteropus_vampyrus
ENSNGAG00000011186	Snd1	99	82.967	ENSPNYG00000000932	snd1	99	83.964	Pundamilia_nyererei
ENSNGAG00000011186	Snd1	100	83.479	ENSPNAG00000001206	snd1	98	84.444	Pygocentrus_nattereri
ENSNGAG00000011186	Snd1	99	98.238	ENSRNOG00000031173	Snd1	99	98.238	Rattus_norvegicus
ENSNGAG00000011186	Snd1	73	98.308	ENSRBIG00000027782	-	93	98.479	Rhinopithecus_bieti
ENSNGAG00000011186	Snd1	100	98.132	ENSRROG00000033020	SND1	100	98.132	Rhinopithecus_roxellana
ENSNGAG00000011186	Snd1	100	98.132	ENSSBOG00000032461	SND1	100	98.132	Saimiri_boliviensis_boliviensis
ENSNGAG00000011186	Snd1	98	92.005	ENSSHAG00000015359	SND1	100	92.005	Sarcophilus_harrisii
ENSNGAG00000011186	Snd1	100	82.481	ENSSFOG00015001103	snd1	98	83.574	Scleropages_formosus
ENSNGAG00000011186	Snd1	98	83.781	ENSSMAG00000001932	snd1	93	83.519	Scophthalmus_maximus
ENSNGAG00000011186	Snd1	100	83.443	ENSSDUG00000002699	snd1	92	84.316	Seriola_dumerili
ENSNGAG00000011186	Snd1	100	76.206	ENSSLDG00000001950	snd1	98	76.974	Seriola_lalandi_dorsalis
ENSNGAG00000011186	Snd1	86	98.113	ENSSARG00000004877	SND1	92	98.113	Sorex_araneus
ENSNGAG00000011186	Snd1	73	87.130	ENSSPUG00000017586	SND1	96	87.130	Sphenodon_punctatus
ENSNGAG00000011186	Snd1	76	84.264	ENSSPAG00000021398	snd1	96	86.387	Stegastes_partitus
ENSNGAG00000011186	Snd1	100	97.692	ENSSSCG00000016590	SND1	100	97.692	Sus_scrofa
ENSNGAG00000011186	Snd1	99	83.394	ENSTRUG00000014067	snd1	98	83.557	Takifugu_rubripes
ENSNGAG00000011186	Snd1	100	83.479	ENSTNIG00000011019	snd1	98	84.228	Tetraodon_nigroviridis
ENSNGAG00000011186	Snd1	93	92.335	ENSTBEG00000003999	SND1	100	92.335	Tupaia_belangeri
ENSNGAG00000011186	Snd1	100	93.516	ENSTTRG00000006059	SND1	100	93.516	Tursiops_truncatus
ENSNGAG00000011186	Snd1	71	88.831	ENSUAMG00000002820	-	86	88.710	Ursus_americanus
ENSNGAG00000011186	Snd1	91	98.099	ENSUAMG00000005604	-	93	98.099	Ursus_americanus
ENSNGAG00000011186	Snd1	100	97.802	ENSUMAG00000005960	SND1	100	97.802	Ursus_maritimus
ENSNGAG00000011186	Snd1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSNGAG00000011186	Snd1	100	97.802	ENSVVUG00000007226	SND1	100	97.802	Vulpes_vulpes
ENSNGAG00000011186	Snd1	97	84.407	ENSXETG00000023043	snd1	100	84.325	Xenopus_tropicalis
ENSNGAG00000011186	Snd1	92	81.354	ENSXCOG00000013629	snd1	99	81.354	Xiphophorus_couchianus
ENSNGAG00000011186	Snd1	100	84.101	ENSXMAG00000011469	snd1	99	84.983	Xiphophorus_maculatus