EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011412 (Gene tree)
Gene ID: 103748167
Gene Symbol: Mbd1
Alias: Cxxc3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 15860 bases
Position: chrKL204044.1:571651-587510
Accession: 103748167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000008453	MBD	PF01429.19	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000013952	-	1710	XM_008850721	ENSNGAP00000008453	569 (aa)	XP_008848943	-

Gene Model

Click here to download ENSNGAG00000011412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011412	Mbd1	96	76.909	ENSG00000141644	MBD1	98	76.909	Homo_sapiens
ENSNGAG00000011412	Mbd1	96	62.559	ENSAMEG00000000238	MBD1	94	63.033	Ailuropoda_melanoleuca
ENSNGAG00000011412	Mbd1	59	38.398	ENSACAG00000006091	-	66	42.857	Anolis_carolinensis
ENSNGAG00000011412	Mbd1	96	75.410	ENSANAG00000036253	MBD1	100	66.250	Aotus_nancymaae
ENSNGAG00000011412	Mbd1	100	62.974	ENSBTAG00000003801	MBD1	98	66.063	Bos_taurus
ENSNGAG00000011412	Mbd1	85	78.261	ENSCJAG00000004959	MBD1	98	63.240	Callithrix_jacchus
ENSNGAG00000011412	Mbd1	98	77.817	ENSCAFG00000018928	MBD1	94	63.766	Canis_familiaris
ENSNGAG00000011412	Mbd1	100	63.664	ENSCAFG00020024272	MBD1	100	64.122	Canis_lupus_dingo
ENSNGAG00000011412	Mbd1	96	66.007	ENSCHIG00000021134	MBD1	98	66.667	Capra_hircus
ENSNGAG00000011412	Mbd1	96	71.304	ENSTSYG00000000509	MBD1	98	71.304	Carlito_syrichta
ENSNGAG00000011412	Mbd1	100	66.724	ENSCAPG00000015782	MBD1	100	66.025	Cavia_aperea
ENSNGAG00000011412	Mbd1	100	59.607	ENSCPOG00000001671	MBD1	98	58.906	Cavia_porcellus
ENSNGAG00000011412	Mbd1	96	71.130	ENSCCAG00000034600	MBD1	98	71.130	Cebus_capucinus
ENSNGAG00000011412	Mbd1	96	73.391	ENSCATG00000029959	MBD1	98	73.391	Cercocebus_atys
ENSNGAG00000011412	Mbd1	96	65.087	ENSCLAG00000007457	MBD1	87	65.769	Chinchilla_lanigera
ENSNGAG00000011412	Mbd1	96	68.647	ENSCSAG00000018070	MBD1	98	68.482	Chlorocebus_sabaeus
ENSNGAG00000011412	Mbd1	96	76.364	ENSCANG00000033425	MBD1	98	76.364	Colobus_angolensis_palliatus
ENSNGAG00000011412	Mbd1	100	65.764	ENSCGRG00001014843	Mbd1	100	65.764	Cricetulus_griseus_chok1gshd
ENSNGAG00000011412	Mbd1	100	68.412	ENSCGRG00000014135	Mbd1	100	68.412	Cricetulus_griseus_crigri
ENSNGAG00000011412	Mbd1	100	61.796	ENSDNOG00000015998	MBD1	100	62.875	Dasypus_novemcinctus
ENSNGAG00000011412	Mbd1	100	71.951	ENSDORG00000013917	Mbd1	100	71.951	Dipodomys_ordii
ENSNGAG00000011412	Mbd1	98	73.759	ENSEASG00005003857	MBD1	92	73.936	Equus_asinus_asinus
ENSNGAG00000011412	Mbd1	100	64.939	ENSECAG00000011497	MBD1	79	67.105	Equus_caballus
ENSNGAG00000011412	Mbd1	96	68.804	ENSFCAG00000015730	MBD1	98	69.324	Felis_catus
ENSNGAG00000011412	Mbd1	98	69.665	ENSFDAG00000011085	MBD1	97	72.840	Fukomys_damarensis
ENSNGAG00000011412	Mbd1	80	38.028	ENSGAGG00000008206	-	52	47.368	Gopherus_agassizii
ENSNGAG00000011412	Mbd1	96	76.909	ENSGGOG00000016966	MBD1	98	76.909	Gorilla_gorilla
ENSNGAG00000011412	Mbd1	96	66.942	ENSHGLG00000008740	MBD1	98	66.942	Heterocephalus_glaber_female
ENSNGAG00000011412	Mbd1	96	69.534	ENSHGLG00100005198	MBD1	98	68.641	Heterocephalus_glaber_male
ENSNGAG00000011412	Mbd1	100	66.823	ENSSTOG00000007780	MBD1	100	66.823	Ictidomys_tridecemlineatus
ENSNGAG00000011412	Mbd1	100	75.347	ENSJJAG00000022859	Mbd1	100	77.083	Jaculus_jaculus
ENSNGAG00000011412	Mbd1	100	59.511	ENSLAFG00000031328	MBD1	100	59.826	Loxodonta_africana
ENSNGAG00000011412	Mbd1	96	73.391	ENSMFAG00000026335	MBD1	98	73.391	Macaca_fascicularis
ENSNGAG00000011412	Mbd1	96	71.949	ENSMMUG00000009050	MBD1	98	65.769	Macaca_mulatta
ENSNGAG00000011412	Mbd1	96	73.391	ENSMNEG00000038822	MBD1	98	73.391	Macaca_nemestrina
ENSNGAG00000011412	Mbd1	96	73.391	ENSMLEG00000043121	MBD1	98	73.391	Mandrillus_leucophaeus
ENSNGAG00000011412	Mbd1	50	73.944	ENSMAUG00000021798	-	97	74.205	Mesocricetus_auratus
ENSNGAG00000011412	Mbd1	96	76.630	ENSMICG00000006414	MBD1	98	76.577	Microcebus_murinus
ENSNGAG00000011412	Mbd1	100	67.742	ENSMUSG00000024561	Mbd1	100	67.742	Mus_musculus
ENSNGAG00000011412	Mbd1	100	67.114	MGP_PahariEiJ_G0019128	Mbd1	100	68.729	Mus_pahari
ENSNGAG00000011412	Mbd1	100	65.041	MGP_SPRETEiJ_G0023304	Mbd1	100	65.041	Mus_spretus
ENSNGAG00000011412	Mbd1	96	62.085	ENSMPUG00000008843	MBD1	94	62.559	Mustela_putorius_furo
ENSNGAG00000011412	Mbd1	96	61.746	ENSMLUG00000008286	MBD1	94	61.429	Myotis_lucifugus
ENSNGAG00000011412	Mbd1	94	70.019	ENSNLEG00000032711	-	89	69.104	Nomascus_leucogenys
ENSNGAG00000011412	Mbd1	96	75.818	ENSNLEG00000011661	-	98	75.818	Nomascus_leucogenys
ENSNGAG00000011412	Mbd1	96	57.591	ENSOPRG00000007647	MBD1	98	57.426	Ochotona_princeps
ENSNGAG00000011412	Mbd1	100	76.963	ENSODEG00000018451	MBD1	100	77.138	Octodon_degus
ENSNGAG00000011412	Mbd1	96	63.981	ENSOCUG00000006554	MBD1	98	64.976	Oryctolagus_cuniculus
ENSNGAG00000011412	Mbd1	96	65.000	ENSOGAG00000003784	MBD1	94	64.688	Otolemur_garnettii
ENSNGAG00000011412	Mbd1	96	63.033	ENSOARG00000004218	MBD1	93	63.507	Ovis_aries
ENSNGAG00000011412	Mbd1	96	73.391	ENSPPAG00000038886	MBD1	98	73.391	Pan_paniscus
ENSNGAG00000011412	Mbd1	96	68.977	ENSPPRG00000021387	MBD1	98	69.497	Panthera_pardus
ENSNGAG00000011412	Mbd1	96	69.151	ENSPTIG00000021231	MBD1	98	69.671	Panthera_tigris_altaica
ENSNGAG00000011412	Mbd1	96	73.391	ENSPTRG00000010021	MBD1	98	73.391	Pan_troglodytes
ENSNGAG00000011412	Mbd1	96	76.685	ENSPANG00000010867	MBD1	89	76.685	Papio_anubis
ENSNGAG00000011412	Mbd1	100	67.126	ENSPEMG00000022630	Mbd1	100	69.072	Peromyscus_maniculatus_bairdii
ENSNGAG00000011412	Mbd1	96	68.317	ENSPPYG00000009158	MBD1	89	68.152	Pongo_abelii
ENSNGAG00000011412	Mbd1	96	59.638	ENSPCAG00000001648	MBD1	98	59.638	Procavia_capensis
ENSNGAG00000011412	Mbd1	96	77.495	ENSPCOG00000012450	MBD1	98	77.495	Propithecus_coquereli
ENSNGAG00000011412	Mbd1	100	57.976	ENSRNOG00000024104	Mbd1	100	62.349	Rattus_norvegicus
ENSNGAG00000011412	Mbd1	96	62.500	ENSRBIG00000041294	MBD1	98	65.679	Rhinopithecus_bieti
ENSNGAG00000011412	Mbd1	96	76.545	ENSRROG00000032517	MBD1	98	76.545	Rhinopithecus_roxellana
ENSNGAG00000011412	Mbd1	96	72.348	ENSSBOG00000027169	MBD1	98	72.348	Saimiri_boliviensis_boliviensis
ENSNGAG00000011412	Mbd1	59	39.489	ENSSHAG00000003661	-	70	43.695	Sarcophilus_harrisii
ENSNGAG00000011412	Mbd1	100	68.264	ENSSSCG00000004516	MBD1	100	68.264	Sus_scrofa
ENSNGAG00000011412	Mbd1	69	73.585	ENSTBEG00000012651	-	63	73.585	Tupaia_belangeri
ENSNGAG00000011412	Mbd1	96	63.322	ENSTTRG00000015523	MBD1	98	64.474	Tursiops_truncatus
ENSNGAG00000011412	Mbd1	89	76.351	ENSUAMG00000004752	MBD1	98	66.667	Ursus_americanus
ENSNGAG00000011412	Mbd1	96	65.132	ENSUMAG00000002947	MBD1	98	65.625	Ursus_maritimus