EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011476 (Gene tree)
Gene ID: 103747857
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 9336 bases
Position: chrKL203967.1:3205331-3214666
Accession: 103747857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000008526	PRP38	PF03371.15	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000014027	-	3064	XM_008850428	ENSNGAP00000008526	545 (aa)	XP_008848650	UPI0004ED50C5

Gene Model

Click here to download ENSNGAG00000011476's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011476	-	100	89.051	ENSAMEG00000004364	-	100	87.956	Ailuropoda_melanoleuca
ENSNGAG00000011476	-	100	90.710	ENSCAFG00000029761	PRPF38B	100	89.818	Canis_familiaris
ENSNGAG00000011476	-	100	90.859	ENSEASG00005000210	PRPF38B	100	92.322	Equus_asinus_asinus
ENSNGAG00000011476	-	100	91.075	ENSFCAG00000039965	PRPF38B	98	98.396	Felis_catus
ENSNGAG00000011476	-	100	93.648	ENSSTOG00000025032	PRPF38B	100	90.018	Ictidomys_tridecemlineatus
ENSNGAG00000011476	-	100	90.545	ENSMPUG00000002738	PRPF38B	100	89.655	Mustela_putorius_furo
ENSNGAG00000011476	-	94	91.506	ENSPTIG00000015015	PRPF38B	98	89.961	Panthera_tigris_altaica
ENSNGAG00000011476	-	100	90.727	ENSVVUG00000000684	-	100	89.818	Vulpes_vulpes