EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011540 (Gene tree)
Gene ID: 103741869
Gene Symbol: Rtca
Alias: 2310009A18Rik|Rtcd1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 19511 bases
Position: chrKL202528.1:13338-32848
Accession: 103741869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000008605	RTC	PF01137.21	6.9e-87	1	1
ENSNGAP00000008613	RTC	PF01137.21	8.6e-67	1	1
ENSNGAP00000008613	RTC_insert	PF05189.13	5.6e-25	1	1
ENSNGAP00000008605	RTC_insert	PF05189.13	6.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000014107	-	1557	XM_008842806	ENSNGAP00000008605	367 (aa)	XP_008841028	UPI0004ED1608
ENSNGAT00000014115	-	1032	-	ENSNGAP00000008613	343 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000011540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011540	Rtca	99	91.803	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSNGAG00000011540	Rtca	59	30.415	ENSG00000120158	RCL1	97	30.415	Homo_sapiens
ENSNGAG00000011540	Rtca	98	70.914	ENSAPOG00000001345	rtca	98	70.914	Acanthochromis_polyacanthus
ENSNGAG00000011540	Rtca	78	91.450	ENSAMEG00000008855	RTCA	100	91.450	Ailuropoda_melanoleuca
ENSNGAG00000011540	Rtca	98	71.191	ENSACIG00000019643	rtca	99	71.191	Amphilophus_citrinellus
ENSNGAG00000011540	Rtca	99	70.492	ENSAOCG00000014979	rtca	99	70.492	Amphiprion_ocellaris
ENSNGAG00000011540	Rtca	99	70.492	ENSAPEG00000006945	rtca	99	70.492	Amphiprion_percula
ENSNGAG00000011540	Rtca	96	70.370	ENSATEG00000006315	rtca	96	70.370	Anabas_testudineus
ENSNGAG00000011540	Rtca	96	79.379	ENSAPLG00000015430	RTCA	100	79.379	Anas_platyrhynchos
ENSNGAG00000011540	Rtca	99	91.803	ENSANAG00000025446	RTCA	100	91.803	Aotus_nancymaae
ENSNGAG00000011540	Rtca	99	69.399	ENSACLG00000020770	rtca	99	69.399	Astatotilapia_calliptera
ENSNGAG00000011540	Rtca	99	70.765	ENSAMXG00000043271	rtca	100	70.765	Astyanax_mexicanus
ENSNGAG00000011540	Rtca	99	92.077	ENSBTAG00000006321	RTCA	100	92.077	Bos_taurus
ENSNGAG00000011540	Rtca	99	91.803	ENSCJAG00000003398	RTCA	100	91.803	Callithrix_jacchus
ENSNGAG00000011540	Rtca	99	92.350	ENSCAFG00000020010	RTCA	68	92.350	Canis_familiaris
ENSNGAG00000011540	Rtca	99	92.350	ENSCAFG00020011528	RTCA	57	92.350	Canis_lupus_dingo
ENSNGAG00000011540	Rtca	99	91.803	ENSCHIG00000018937	RTCA	100	91.803	Capra_hircus
ENSNGAG00000011540	Rtca	99	91.803	ENSTSYG00000011305	RTCA	100	91.803	Carlito_syrichta
ENSNGAG00000011540	Rtca	99	91.530	ENSCCAG00000021844	RTCA	100	91.530	Cebus_capucinus
ENSNGAG00000011540	Rtca	99	88.654	ENSCATG00000019364	RTCA	100	90.939	Cercocebus_atys
ENSNGAG00000011540	Rtca	92	91.798	ENSCLAG00000006125	RTCA	100	91.798	Chinchilla_lanigera
ENSNGAG00000011540	Rtca	99	92.077	ENSCSAG00000001509	RTCA	100	92.077	Chlorocebus_sabaeus
ENSNGAG00000011540	Rtca	99	91.803	ENSCHOG00000005211	RTCA	100	91.803	Choloepus_hoffmanni
ENSNGAG00000011540	Rtca	99	82.514	ENSCPBG00000026658	RTCA	100	82.514	Chrysemys_picta_bellii
ENSNGAG00000011540	Rtca	98	55.000	ENSCING00000007875	-	98	55.000	Ciona_intestinalis
ENSNGAG00000011540	Rtca	98	54.167	ENSCSAVG00000007269	-	98	54.167	Ciona_savignyi
ENSNGAG00000011540	Rtca	99	91.803	ENSCANG00000040106	RTCA	100	91.803	Colobus_angolensis_palliatus
ENSNGAG00000011540	Rtca	78	95.167	ENSCGRG00001013163	Rtca	85	95.167	Cricetulus_griseus_chok1gshd
ENSNGAG00000011540	Rtca	98	68.889	ENSCSEG00000000530	rtca	96	68.889	Cynoglossus_semilaevis
ENSNGAG00000011540	Rtca	99	58.743	ENSCVAG00000021809	rtca	100	58.743	Cyprinodon_variegatus
ENSNGAG00000011540	Rtca	99	71.585	ENSDARG00000002215	rtca	100	71.585	Danio_rerio
ENSNGAG00000011540	Rtca	99	91.530	ENSDNOG00000000456	RTCA	100	91.530	Dasypus_novemcinctus
ENSNGAG00000011540	Rtca	59	30.516	ENSDNOG00000019911	RCL1	96	30.516	Dasypus_novemcinctus
ENSNGAG00000011540	Rtca	99	93.989	ENSDORG00000005448	Rtca	100	93.989	Dipodomys_ordii
ENSNGAG00000011540	Rtca	99	39.011	FBgn0025630	Rtca	99	39.011	Drosophila_melanogaster
ENSNGAG00000011540	Rtca	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSNGAG00000011540	Rtca	99	91.530	ENSEASG00005015926	RTCA	100	91.530	Equus_asinus_asinus
ENSNGAG00000011540	Rtca	99	91.530	ENSECAG00000019831	RTCA	100	91.530	Equus_caballus
ENSNGAG00000011540	Rtca	91	81.503	ENSEEUG00000001165	RTCA	100	81.503	Erinaceus_europaeus
ENSNGAG00000011540	Rtca	98	71.468	ENSELUG00000003741	rtca	99	71.468	Esox_lucius
ENSNGAG00000011540	Rtca	99	92.350	ENSFCAG00000024460	RTCA	100	92.350	Felis_catus
ENSNGAG00000011540	Rtca	93	80.882	ENSFALG00000002443	RTCA	91	80.882	Ficedula_albicollis
ENSNGAG00000011540	Rtca	99	91.257	ENSFDAG00000012070	-	100	91.257	Fukomys_damarensis
ENSNGAG00000011540	Rtca	97	72.549	ENSFDAG00000016084	-	98	72.549	Fukomys_damarensis
ENSNGAG00000011540	Rtca	63	68.837	ENSFHEG00000002868	rtca	93	67.273	Fundulus_heteroclitus
ENSNGAG00000011540	Rtca	99	67.760	ENSGMOG00000013264	rtca	100	67.760	Gadus_morhua
ENSNGAG00000011540	Rtca	99	81.694	ENSGALG00000005277	RTCA	100	81.694	Gallus_gallus
ENSNGAG00000011540	Rtca	99	70.492	ENSGAFG00000011853	rtca	99	70.492	Gambusia_affinis
ENSNGAG00000011540	Rtca	99	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSNGAG00000011540	Rtca	80	82.253	ENSGAGG00000023306	RTCA	100	82.253	Gopherus_agassizii
ENSNGAG00000011540	Rtca	99	90.984	ENSGGOG00000044018	-	100	90.984	Gorilla_gorilla
ENSNGAG00000011540	Rtca	99	91.803	ENSGGOG00000009546	-	100	91.803	Gorilla_gorilla
ENSNGAG00000011540	Rtca	99	69.126	ENSHBUG00000002114	rtca	99	69.126	Haplochromis_burtoni
ENSNGAG00000011540	Rtca	99	90.164	ENSHGLG00000002617	RTCA	100	90.164	Heterocephalus_glaber_female
ENSNGAG00000011540	Rtca	99	90.164	ENSHGLG00100006056	RTCA	100	90.164	Heterocephalus_glaber_male
ENSNGAG00000011540	Rtca	99	64.754	ENSHCOG00000020628	rtca	89	64.754	Hippocampus_comes
ENSNGAG00000011540	Rtca	99	71.038	ENSIPUG00000024803	rtca	100	71.038	Ictalurus_punctatus
ENSNGAG00000011540	Rtca	99	84.973	ENSSTOG00000013528	-	100	84.973	Ictidomys_tridecemlineatus
ENSNGAG00000011540	Rtca	99	80.654	ENSSTOG00000033099	-	100	80.654	Ictidomys_tridecemlineatus
ENSNGAG00000011540	Rtca	99	66.667	ENSJJAG00000016178	Rtca	100	66.667	Jaculus_jaculus
ENSNGAG00000011540	Rtca	98	72.299	ENSKMAG00000006651	rtca	98	72.299	Kryptolebias_marmoratus
ENSNGAG00000011540	Rtca	99	69.231	ENSLBEG00000028971	rtca	99	69.231	Labrus_bergylta
ENSNGAG00000011540	Rtca	92	69.085	ENSLBEG00000002448	-	99	68.847	Labrus_bergylta
ENSNGAG00000011540	Rtca	99	77.869	ENSLACG00000013666	RTCA	100	77.869	Latimeria_chalumnae
ENSNGAG00000011540	Rtca	99	72.678	ENSLOCG00000000093	rtca	99	72.678	Lepisosteus_oculatus
ENSNGAG00000011540	Rtca	99	91.803	ENSLAFG00000001473	RTCA	100	91.803	Loxodonta_africana
ENSNGAG00000011540	Rtca	99	92.077	ENSMFAG00000034132	RTCA	100	92.077	Macaca_fascicularis
ENSNGAG00000011540	Rtca	99	91.530	ENSMMUG00000019105	RTCA	100	91.530	Macaca_mulatta
ENSNGAG00000011540	Rtca	90	91.262	ENSMNEG00000037163	RTCA	100	91.262	Macaca_nemestrina
ENSNGAG00000011540	Rtca	99	75.137	ENSMLEG00000042151	RTCA	100	75.137	Mandrillus_leucophaeus
ENSNGAG00000011540	Rtca	99	71.311	ENSMAMG00000016536	rtca	100	71.311	Mastacembelus_armatus
ENSNGAG00000011540	Rtca	99	69.399	ENSMZEG00005017945	rtca	99	69.399	Maylandia_zebra
ENSNGAG00000011540	Rtca	92	80.442	ENSMGAG00000006892	RTCA	99	80.564	Meleagris_gallopavo
ENSNGAG00000011540	Rtca	99	96.175	ENSMAUG00000008488	Rtca	100	96.175	Mesocricetus_auratus
ENSNGAG00000011540	Rtca	90	92.557	ENSMICG00000008643	RTCA	100	92.557	Microcebus_murinus
ENSNGAG00000011540	Rtca	99	94.536	ENSMOCG00000016660	Rtca	100	94.536	Microtus_ochrogaster
ENSNGAG00000011540	Rtca	90	71.521	ENSMMOG00000007750	rtca	100	71.521	Mola_mola
ENSNGAG00000011540	Rtca	99	88.798	ENSMODG00000003557	RTCA	100	88.798	Monodelphis_domestica
ENSNGAG00000011540	Rtca	99	71.311	ENSMALG00000020844	rtca	100	71.311	Monopterus_albus
ENSNGAG00000011540	Rtca	99	94.536	MGP_CAROLIEiJ_G0025565	Rtca	100	94.536	Mus_caroli
ENSNGAG00000011540	Rtca	99	93.989	ENSMUSG00000000339	Rtca	100	93.989	Mus_musculus
ENSNGAG00000011540	Rtca	99	94.262	MGP_PahariEiJ_G0027011	Rtca	100	94.262	Mus_pahari
ENSNGAG00000011540	Rtca	99	94.262	MGP_SPRETEiJ_G0026515	Rtca	100	94.262	Mus_spretus
ENSNGAG00000011540	Rtca	99	93.169	ENSMPUG00000012119	RTCA	100	93.169	Mustela_putorius_furo
ENSNGAG00000011540	Rtca	99	86.104	ENSMLUG00000009922	RTCA	100	86.104	Myotis_lucifugus
ENSNGAG00000011540	Rtca	99	69.399	ENSNBRG00000003062	rtca	99	69.399	Neolamprologus_brichardi
ENSNGAG00000011540	Rtca	99	91.803	ENSNLEG00000031426	RTCA	100	91.803	Nomascus_leucogenys
ENSNGAG00000011540	Rtca	58	85.366	ENSMEUG00000010030	-	61	86.364	Notamacropus_eugenii
ENSNGAG00000011540	Rtca	78	86.989	ENSOPRG00000012092	RTCA	71	86.989	Ochotona_princeps
ENSNGAG00000011540	Rtca	95	92.241	ENSODEG00000006990	RTCA	96	92.308	Octodon_degus
ENSNGAG00000011540	Rtca	99	69.126	ENSONIG00000007753	rtca	99	69.126	Oreochromis_niloticus
ENSNGAG00000011540	Rtca	93	84.591	ENSOANG00000012055	RTCA	98	84.591	Ornithorhynchus_anatinus
ENSNGAG00000011540	Rtca	99	92.077	ENSOCUG00000014247	RTCA	100	92.077	Oryctolagus_cuniculus
ENSNGAG00000011540	Rtca	99	69.945	ENSORLG00000013605	rtca	100	69.945	Oryzias_latipes
ENSNGAG00000011540	Rtca	99	69.945	ENSORLG00020001904	rtca	100	69.945	Oryzias_latipes_hni
ENSNGAG00000011540	Rtca	99	69.945	ENSORLG00015021064	rtca	100	69.945	Oryzias_latipes_hsok
ENSNGAG00000011540	Rtca	99	70.765	ENSOMEG00000000756	rtca	100	70.765	Oryzias_melastigma
ENSNGAG00000011540	Rtca	99	82.787	ENSOGAG00000005627	RTCA	100	82.787	Otolemur_garnettii
ENSNGAG00000011540	Rtca	92	91.167	ENSOARG00000018122	RTCA	100	91.195	Ovis_aries
ENSNGAG00000011540	Rtca	99	88.918	ENSPPAG00000035119	RTCA	100	91.586	Pan_paniscus
ENSNGAG00000011540	Rtca	99	92.077	ENSPPRG00000000350	RTCA	100	92.077	Panthera_pardus
ENSNGAG00000011540	Rtca	99	92.077	ENSPTIG00000012816	RTCA	100	92.077	Panthera_tigris_altaica
ENSNGAG00000011540	Rtca	99	88.391	ENSPTRG00000001004	RTCA	100	90.939	Pan_troglodytes
ENSNGAG00000011540	Rtca	99	92.077	ENSPANG00000000346	RTCA	100	92.077	Papio_anubis
ENSNGAG00000011540	Rtca	99	72.951	ENSPKIG00000001653	rtca	100	72.951	Paramormyrops_kingsleyae
ENSNGAG00000011540	Rtca	99	82.787	ENSPSIG00000011408	RTCA	100	82.787	Pelodiscus_sinensis
ENSNGAG00000011540	Rtca	99	94.809	ENSPEMG00000018582	Rtca	100	94.809	Peromyscus_maniculatus_bairdii
ENSNGAG00000011540	Rtca	100	57.880	ENSPMAG00000009110	rtca	100	57.880	Petromyzon_marinus
ENSNGAG00000011540	Rtca	99	88.251	ENSPCIG00000007684	RTCA	100	88.251	Phascolarctos_cinereus
ENSNGAG00000011540	Rtca	99	70.845	ENSPFOG00000004824	rtca	100	70.845	Poecilia_formosa
ENSNGAG00000011540	Rtca	99	71.038	ENSPLAG00000011753	rtca	99	71.038	Poecilia_latipinna
ENSNGAG00000011540	Rtca	99	71.038	ENSPMEG00000020469	rtca	99	71.038	Poecilia_mexicana
ENSNGAG00000011540	Rtca	99	71.858	ENSPREG00000001365	rtca	99	71.858	Poecilia_reticulata
ENSNGAG00000011540	Rtca	99	91.803	ENSPPYG00000001115	RTCA	100	91.803	Pongo_abelii
ENSNGAG00000011540	Rtca	99	87.705	ENSPCAG00000005076	RTCA	100	87.705	Procavia_capensis
ENSNGAG00000011540	Rtca	99	93.169	ENSPCOG00000005603	RTCA	100	93.169	Propithecus_coquereli
ENSNGAG00000011540	Rtca	99	87.863	ENSPVAG00000009478	RTCA	100	87.863	Pteropus_vampyrus
ENSNGAG00000011540	Rtca	99	69.399	ENSPNYG00000004722	rtca	99	69.399	Pundamilia_nyererei
ENSNGAG00000011540	Rtca	99	71.038	ENSPNAG00000022270	rtca	100	71.038	Pygocentrus_nattereri
ENSNGAG00000011540	Rtca	99	94.262	ENSRNOG00000014575	Rtca	100	94.262	Rattus_norvegicus
ENSNGAG00000011540	Rtca	99	88.127	ENSRBIG00000041180	RTCA	100	90.291	Rhinopithecus_bieti
ENSNGAG00000011540	Rtca	99	91.257	ENSRROG00000024929	RTCA	100	91.257	Rhinopithecus_roxellana
ENSNGAG00000011540	Rtca	99	91.530	ENSSBOG00000028626	RTCA	100	91.530	Saimiri_boliviensis_boliviensis
ENSNGAG00000011540	Rtca	99	88.798	ENSSHAG00000001758	RTCA	100	88.798	Sarcophilus_harrisii
ENSNGAG00000011540	Rtca	98	68.333	ENSSMAG00000014680	rtca	97	68.333	Scophthalmus_maximus
ENSNGAG00000011540	Rtca	98	69.722	ENSSDUG00000015585	rtca	97	69.722	Seriola_dumerili
ENSNGAG00000011540	Rtca	96	69.801	ENSSLDG00000018985	rtca	95	69.801	Seriola_lalandi_dorsalis
ENSNGAG00000011540	Rtca	92	85.174	ENSSARG00000013993	RTCA	100	85.174	Sorex_araneus
ENSNGAG00000011540	Rtca	99	69.399	ENSSPAG00000011938	rtca	99	69.399	Stegastes_partitus
ENSNGAG00000011540	Rtca	99	92.623	ENSSSCG00000006865	RTCA	100	92.623	Sus_scrofa
ENSNGAG00000011540	Rtca	99	81.421	ENSTGUG00000005154	RTCA	100	81.421	Taeniopygia_guttata
ENSNGAG00000011540	Rtca	99	70.219	ENSTRUG00000008799	rtca	100	70.219	Takifugu_rubripes
ENSNGAG00000011540	Rtca	99	71.311	ENSTNIG00000004725	rtca	100	71.311	Tetraodon_nigroviridis
ENSNGAG00000011540	Rtca	50	90.566	ENSTBEG00000000943	RTCA	81	66.387	Tupaia_belangeri
ENSNGAG00000011540	Rtca	99	87.863	ENSTTRG00000015327	RTCA	100	87.863	Tursiops_truncatus
ENSNGAG00000011540	Rtca	93	90.671	ENSUAMG00000017265	RTCA	96	90.671	Ursus_americanus
ENSNGAG00000011540	Rtca	99	92.350	ENSUMAG00000007881	RTCA	100	92.350	Ursus_maritimus
ENSNGAG00000011540	Rtca	94	80.864	ENSVPAG00000001039	RTCA	85	80.864	Vicugna_pacos
ENSNGAG00000011540	Rtca	99	92.077	ENSVVUG00000022041	RTCA	68	92.077	Vulpes_vulpes
ENSNGAG00000011540	Rtca	98	65.659	ENSXETG00000031661	RTCA	98	65.659	Xenopus_tropicalis
ENSNGAG00000011540	Rtca	99	61.475	ENSXCOG00000008002	rtca	100	61.475	Xiphophorus_couchianus
ENSNGAG00000011540	Rtca	99	70.492	ENSXMAG00000005482	rtca	99	70.492	Xiphophorus_maculatus