EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011884 (Gene tree)
Gene ID: 103730248
Gene Symbol: Prpf38a
Alias: 2410002M20Rik
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 23663 bases
Position: chrKL199776.1:888214-911876
Accession: 103730248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009112	PRP38	PF03371.15	1.3e-62	1	1
ENSNGAP00000009109	PRP38	PF03371.15	1.4e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000014621	-	924	-	ENSNGAP00000009112	307 (aa)	-	-
ENSNGAT00000014618	-	1468	XM_008828432	ENSNGAP00000009109	312 (aa)	XP_008826654	UPI000228E53A

Gene Model

Click here to download ENSNGAG00000011884's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011884	Prpf38a	100	99.679	ENSG00000134748	PRPF38A	100	99.679	Homo_sapiens
ENSNGAG00000011884	Prpf38a	72	88.688	ENSAPOG00000011652	prpf38a	100	83.280	Acanthochromis_polyacanthus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSAMEG00000009319	PRPF38A	100	99.679	Ailuropoda_melanoleuca
ENSNGAG00000011884	Prpf38a	72	86.425	ENSACIG00000012292	prpf38a	100	83.117	Amphilophus_citrinellus
ENSNGAG00000011884	Prpf38a	72	88.688	ENSAOCG00000018004	prpf38a	100	83.280	Amphiprion_ocellaris
ENSNGAG00000011884	Prpf38a	72	88.688	ENSAPEG00000021414	prpf38a	100	83.280	Amphiprion_percula
ENSNGAG00000011884	Prpf38a	72	89.140	ENSATEG00000004608	prpf38a	100	83.601	Anabas_testudineus
ENSNGAG00000011884	Prpf38a	79	97.976	ENSAPLG00000005827	PRPF38A	99	97.976	Anas_platyrhynchos
ENSNGAG00000011884	Prpf38a	100	95.513	ENSACAG00000008249	PRPF38A	100	95.513	Anolis_carolinensis
ENSNGAG00000011884	Prpf38a	100	70.096	ENSANAG00000029204	-	100	70.096	Aotus_nancymaae
ENSNGAG00000011884	Prpf38a	100	99.679	ENSANAG00000027839	PRPF38A	100	99.679	Aotus_nancymaae
ENSNGAG00000011884	Prpf38a	72	86.425	ENSACLG00000021595	prpf38a	100	81.994	Astatotilapia_calliptera
ENSNGAG00000011884	Prpf38a	100	82.428	ENSAMXG00000029274	prpf38a	100	82.748	Astyanax_mexicanus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSBTAG00000002720	PRPF38A	100	99.679	Bos_taurus
ENSNGAG00000011884	Prpf38a	64	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSNGAG00000011884	Prpf38a	100	99.679	ENSCJAG00000021594	PRPF38A	100	99.679	Callithrix_jacchus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSCAFG00000003740	PRPF38A	100	99.679	Canis_familiaris
ENSNGAG00000011884	Prpf38a	100	99.679	ENSCAFG00020010939	PRPF38A	100	99.679	Canis_lupus_dingo
ENSNGAG00000011884	Prpf38a	100	99.679	ENSCHIG00000024730	PRPF38A	100	99.679	Capra_hircus
ENSNGAG00000011884	Prpf38a	86	98.513	ENSTSYG00000031994	-	95	98.513	Carlito_syrichta
ENSNGAG00000011884	Prpf38a	100	99.679	ENSTSYG00000009868	-	100	99.679	Carlito_syrichta
ENSNGAG00000011884	Prpf38a	100	99.679	ENSCPOG00000005079	PRPF38A	100	99.679	Cavia_porcellus
ENSNGAG00000011884	Prpf38a	100	99.359	ENSCCAG00000026502	PRPF38A	100	99.359	Cebus_capucinus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSCATG00000032296	PRPF38A	100	99.679	Cercocebus_atys
ENSNGAG00000011884	Prpf38a	100	64.103	ENSCATG00000044190	-	100	62.821	Cercocebus_atys
ENSNGAG00000011884	Prpf38a	100	99.679	ENSCLAG00000005816	PRPF38A	100	99.679	Chinchilla_lanigera
ENSNGAG00000011884	Prpf38a	78	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSNGAG00000011884	Prpf38a	100	98.397	ENSCPBG00000014791	PRPF38A	100	98.397	Chrysemys_picta_bellii
ENSNGAG00000011884	Prpf38a	68	71.429	ENSCSAVG00000009580	-	78	66.102	Ciona_savignyi
ENSNGAG00000011884	Prpf38a	96	99.666	ENSCANG00000032608	PRPF38A	100	99.666	Colobus_angolensis_palliatus
ENSNGAG00000011884	Prpf38a	84	82.171	ENSCGRG00001002557	-	86	83.399	Cricetulus_griseus_chok1gshd
ENSNGAG00000011884	Prpf38a	100	100.000	ENSCGRG00001018502	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSNGAG00000011884	Prpf38a	100	100.000	ENSCGRG00000014868	Prpf38a	100	100.000	Cricetulus_griseus_crigri
ENSNGAG00000011884	Prpf38a	72	87.783	ENSCSEG00000001269	prpf38a	87	83.465	Cynoglossus_semilaevis
ENSNGAG00000011884	Prpf38a	72	90.498	ENSCVAG00000012305	prpf38a	100	84.244	Cyprinodon_variegatus
ENSNGAG00000011884	Prpf38a	100	81.789	ENSDARG00000039213	prpf38a	100	81.789	Danio_rerio
ENSNGAG00000011884	Prpf38a	100	99.679	ENSDNOG00000042326	PRPF38A	100	99.679	Dasypus_novemcinctus
ENSNGAG00000011884	Prpf38a	84	83.270	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSNGAG00000011884	Prpf38a	84	83.270	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSNGAG00000011884	Prpf38a	100	86.218	ENSDORG00000023857	-	100	86.218	Dipodomys_ordii
ENSNGAG00000011884	Prpf38a	64	75.635	FBgn0050342	Prp38	57	76.596	Drosophila_melanogaster
ENSNGAG00000011884	Prpf38a	77	81.092	ENSEBUG00000012588	prpf38a	99	75.884	Eptatretus_burgeri
ENSNGAG00000011884	Prpf38a	100	99.679	ENSEASG00005014427	PRPF38A	100	99.679	Equus_asinus_asinus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSECAG00000022628	PRPF38A	100	99.679	Equus_caballus
ENSNGAG00000011884	Prpf38a	72	86.878	ENSELUG00000021094	prpf38a	100	82.637	Esox_lucius
ENSNGAG00000011884	Prpf38a	100	99.679	ENSFCAG00000002518	PRPF38A	100	99.679	Felis_catus
ENSNGAG00000011884	Prpf38a	87	96.679	ENSFALG00000005598	-	100	96.679	Ficedula_albicollis
ENSNGAG00000011884	Prpf38a	99	86.601	ENSFALG00000003612	-	99	86.275	Ficedula_albicollis
ENSNGAG00000011884	Prpf38a	100	99.359	ENSFDAG00000011287	PRPF38A	100	99.359	Fukomys_damarensis
ENSNGAG00000011884	Prpf38a	84	78.788	ENSFHEG00000014317	prpf38a	87	86.328	Fundulus_heteroclitus
ENSNGAG00000011884	Prpf38a	54	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSNGAG00000011884	Prpf38a	100	98.077	ENSGALG00000010627	PRPF38A	100	98.077	Gallus_gallus
ENSNGAG00000011884	Prpf38a	72	90.498	ENSGAFG00000012422	prpf38a	100	84.566	Gambusia_affinis
ENSNGAG00000011884	Prpf38a	72	86.099	ENSGACG00000005423	prpf38a	100	81.789	Gasterosteus_aculeatus
ENSNGAG00000011884	Prpf38a	100	98.718	ENSGAGG00000020547	PRPF38A	100	98.718	Gopherus_agassizii
ENSNGAG00000011884	Prpf38a	100	99.679	ENSGGOG00000003940	PRPF38A	100	99.679	Gorilla_gorilla
ENSNGAG00000011884	Prpf38a	62	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSNGAG00000011884	Prpf38a	100	99.679	ENSHGLG00000000475	PRPF38A	100	99.679	Heterocephalus_glaber_female
ENSNGAG00000011884	Prpf38a	100	84.365	ENSHGLG00000007918	-	100	85.993	Heterocephalus_glaber_female
ENSNGAG00000011884	Prpf38a	100	84.365	ENSHGLG00100003928	-	100	85.993	Heterocephalus_glaber_male
ENSNGAG00000011884	Prpf38a	100	99.679	ENSHGLG00100008935	PRPF38A	100	99.679	Heterocephalus_glaber_male
ENSNGAG00000011884	Prpf38a	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSNGAG00000011884	Prpf38a	75	87.500	ENSIPUG00000005757	prpf38a	100	81.350	Ictalurus_punctatus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSSTOG00000015610	PRPF38A	100	99.679	Ictidomys_tridecemlineatus
ENSNGAG00000011884	Prpf38a	100	99.038	ENSJJAG00000015811	Prpf38a	100	99.038	Jaculus_jaculus
ENSNGAG00000011884	Prpf38a	72	90.045	ENSKMAG00000006588	prpf38a	100	83.923	Kryptolebias_marmoratus
ENSNGAG00000011884	Prpf38a	96	79.195	ENSLBEG00000020585	prpf38a	100	81.350	Labrus_bergylta
ENSNGAG00000011884	Prpf38a	100	92.308	ENSLACG00000011495	PRPF38A	100	92.308	Latimeria_chalumnae
ENSNGAG00000011884	Prpf38a	100	81.553	ENSLOCG00000006262	prpf38a	100	83.601	Lepisosteus_oculatus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSLAFG00000025862	PRPF38A	100	99.679	Loxodonta_africana
ENSNGAG00000011884	Prpf38a	100	99.679	ENSMFAG00000039449	PRPF38A	100	99.679	Macaca_fascicularis
ENSNGAG00000011884	Prpf38a	87	98.897	ENSMMUG00000014333	PRPF38A	98	98.897	Macaca_mulatta
ENSNGAG00000011884	Prpf38a	100	64.423	ENSMNEG00000040242	-	100	63.462	Macaca_nemestrina
ENSNGAG00000011884	Prpf38a	100	99.679	ENSMNEG00000031221	PRPF38A	100	99.679	Macaca_nemestrina
ENSNGAG00000011884	Prpf38a	100	99.679	ENSMLEG00000041105	PRPF38A	100	99.679	Mandrillus_leucophaeus
ENSNGAG00000011884	Prpf38a	72	88.235	ENSMAMG00000015431	prpf38a	100	83.280	Mastacembelus_armatus
ENSNGAG00000011884	Prpf38a	72	86.425	ENSMZEG00005017838	prpf38a	100	81.994	Maylandia_zebra
ENSNGAG00000011884	Prpf38a	96	97.993	ENSMGAG00000011176	PRPF38A	100	97.993	Meleagris_gallopavo
ENSNGAG00000011884	Prpf38a	85	95.076	ENSMAUG00000018029	-	98	92.248	Mesocricetus_auratus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSMICG00000014193	PRPF38A	100	99.679	Microcebus_murinus
ENSNGAG00000011884	Prpf38a	100	100.000	ENSMOCG00000013080	Prpf38a	100	100.000	Microtus_ochrogaster
ENSNGAG00000011884	Prpf38a	82	85.039	ENSMMOG00000016972	prpf38a	100	77.419	Mola_mola
ENSNGAG00000011884	Prpf38a	100	98.083	ENSMODG00000000644	PRPF38A	100	98.083	Monodelphis_domestica
ENSNGAG00000011884	Prpf38a	72	88.235	ENSMALG00000019363	prpf38a	97	83.601	Monopterus_albus
ENSNGAG00000011884	Prpf38a	100	99.038	MGP_CAROLIEiJ_G0026269	Prpf38a	100	99.038	Mus_caroli
ENSNGAG00000011884	Prpf38a	100	99.038	ENSMUSG00000063800	Prpf38a	100	99.038	Mus_musculus
ENSNGAG00000011884	Prpf38a	100	99.038	MGP_PahariEiJ_G0028602	Prpf38a	100	99.038	Mus_pahari
ENSNGAG00000011884	Prpf38a	100	98.718	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.718	Mus_spretus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSMPUG00000006896	PRPF38A	100	99.679	Mustela_putorius_furo
ENSNGAG00000011884	Prpf38a	72	85.068	ENSNBRG00000004013	prpf38a	98	83.442	Neolamprologus_brichardi
ENSNGAG00000011884	Prpf38a	100	66.987	ENSNLEG00000033398	-	94	66.987	Nomascus_leucogenys
ENSNGAG00000011884	Prpf38a	93	99.654	ENSNLEG00000017999	PRPF38A	93	99.654	Nomascus_leucogenys
ENSNGAG00000011884	Prpf38a	97	73.510	ENSNLEG00000012592	-	99	73.510	Nomascus_leucogenys
ENSNGAG00000011884	Prpf38a	100	95.192	ENSMEUG00000003860	PRPF38A	100	95.192	Notamacropus_eugenii
ENSNGAG00000011884	Prpf38a	78	100.000	ENSOPRG00000008985	PRPF38A	100	100.000	Ochotona_princeps
ENSNGAG00000011884	Prpf38a	100	99.679	ENSODEG00000005869	PRPF38A	100	99.679	Octodon_degus
ENSNGAG00000011884	Prpf38a	72	86.878	ENSONIG00000007816	prpf38a	100	81.029	Oreochromis_niloticus
ENSNGAG00000011884	Prpf38a	100	65.287	ENSOANG00000009541	-	100	65.287	Ornithorhynchus_anatinus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSOCUG00000000963	PRPF38A	100	99.679	Oryctolagus_cuniculus
ENSNGAG00000011884	Prpf38a	96	82.333	ENSORLG00000013485	prpf38a	99	84.194	Oryzias_latipes
ENSNGAG00000011884	Prpf38a	96	82.333	ENSORLG00020002130	prpf38a	99	84.194	Oryzias_latipes_hni
ENSNGAG00000011884	Prpf38a	96	82.000	ENSORLG00015021393	prpf38a	99	83.871	Oryzias_latipes_hsok
ENSNGAG00000011884	Prpf38a	96	81.879	ENSOMEG00000016333	prpf38a	100	83.601	Oryzias_melastigma
ENSNGAG00000011884	Prpf38a	100	99.679	ENSOGAG00000005423	PRPF38A	100	99.679	Otolemur_garnettii
ENSNGAG00000011884	Prpf38a	100	99.679	ENSOARG00000005373	PRPF38A	100	99.679	Ovis_aries
ENSNGAG00000011884	Prpf38a	100	99.679	ENSPPAG00000030905	PRPF38A	100	99.679	Pan_paniscus
ENSNGAG00000011884	Prpf38a	100	77.244	ENSPPAG00000033867	-	100	77.244	Pan_paniscus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSPPRG00000013268	PRPF38A	100	99.679	Panthera_pardus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSPTIG00000015419	PRPF38A	100	99.679	Panthera_tigris_altaica
ENSNGAG00000011884	Prpf38a	100	99.679	ENSPTRG00000000739	PRPF38A	100	99.679	Pan_troglodytes
ENSNGAG00000011884	Prpf38a	100	99.679	ENSPANG00000015483	PRPF38A	100	99.679	Papio_anubis
ENSNGAG00000011884	Prpf38a	100	80.195	ENSPKIG00000011439	prpf38a	100	82.258	Paramormyrops_kingsleyae
ENSNGAG00000011884	Prpf38a	100	98.077	ENSPSIG00000017487	PRPF38A	100	98.077	Pelodiscus_sinensis
ENSNGAG00000011884	Prpf38a	71	89.401	ENSPMGG00000021352	prpf38a	99	79.934	Periophthalmus_magnuspinnatus
ENSNGAG00000011884	Prpf38a	100	93.968	ENSPEMG00000011212	-	100	93.968	Peromyscus_maniculatus_bairdii
ENSNGAG00000011884	Prpf38a	100	100.000	ENSPEMG00000023277	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSNGAG00000011884	Prpf38a	100	97.764	ENSPCIG00000022369	-	100	97.764	Phascolarctos_cinereus
ENSNGAG00000011884	Prpf38a	83	81.467	ENSPFOG00000004248	prpf38a	100	84.566	Poecilia_formosa
ENSNGAG00000011884	Prpf38a	92	78.893	ENSPLAG00000010328	prpf38a	100	84.566	Poecilia_latipinna
ENSNGAG00000011884	Prpf38a	83	81.369	ENSPMEG00000011804	prpf38a	100	84.566	Poecilia_mexicana
ENSNGAG00000011884	Prpf38a	95	73.667	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSNGAG00000011884	Prpf38a	100	91.167	ENSPPYG00000001348	PRPF38A	100	91.167	Pongo_abelii
ENSNGAG00000011884	Prpf38a	100	99.038	ENSPCAG00000013328	PRPF38A	100	99.038	Procavia_capensis
ENSNGAG00000011884	Prpf38a	100	76.873	ENSPCOG00000020709	-	100	76.547	Propithecus_coquereli
ENSNGAG00000011884	Prpf38a	100	99.679	ENSPCOG00000016387	-	100	99.679	Propithecus_coquereli
ENSNGAG00000011884	Prpf38a	100	99.679	ENSPVAG00000009803	PRPF38A	100	99.679	Pteropus_vampyrus
ENSNGAG00000011884	Prpf38a	72	86.425	ENSPNYG00000005571	prpf38a	100	81.994	Pundamilia_nyererei
ENSNGAG00000011884	Prpf38a	100	82.428	ENSPNAG00000010399	prpf38a	100	82.428	Pygocentrus_nattereri
ENSNGAG00000011884	Prpf38a	100	99.679	ENSRNOG00000009451	Prpf38a	100	99.679	Rattus_norvegicus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSRBIG00000036442	PRPF38A	100	99.679	Rhinopithecus_bieti
ENSNGAG00000011884	Prpf38a	100	62.179	ENSRBIG00000034053	-	100	58.974	Rhinopithecus_bieti
ENSNGAG00000011884	Prpf38a	100	99.679	ENSRROG00000032788	PRPF38A	100	99.679	Rhinopithecus_roxellana
ENSNGAG00000011884	Prpf38a	98	78.738	ENSRROG00000040003	-	99	78.431	Rhinopithecus_roxellana
ENSNGAG00000011884	Prpf38a	100	99.679	ENSSBOG00000019515	PRPF38A	100	99.679	Saimiri_boliviensis_boliviensis
ENSNGAG00000011884	Prpf38a	96	71.053	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSNGAG00000011884	Prpf38a	87	97.417	ENSSHAG00000006906	-	100	97.417	Sarcophilus_harrisii
ENSNGAG00000011884	Prpf38a	100	80.259	ENSSFOG00015013572	prpf38a	100	81.672	Scleropages_formosus
ENSNGAG00000011884	Prpf38a	72	88.688	ENSSMAG00000015379	prpf38a	99	83.172	Scophthalmus_maximus
ENSNGAG00000011884	Prpf38a	72	89.140	ENSSDUG00000001324	prpf38a	100	83.923	Seriola_dumerili
ENSNGAG00000011884	Prpf38a	72	89.140	ENSSLDG00000014803	prpf38a	100	83.923	Seriola_lalandi_dorsalis
ENSNGAG00000011884	Prpf38a	100	82.372	ENSSARG00000014458	PRPF38A	100	82.372	Sorex_araneus
ENSNGAG00000011884	Prpf38a	100	95.833	ENSSPUG00000013259	PRPF38A	100	95.833	Sphenodon_punctatus
ENSNGAG00000011884	Prpf38a	72	70.588	ENSSPAG00000010449	prpf38a	100	66.559	Stegastes_partitus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSSSCG00000028288	PRPF38A	100	99.679	Sus_scrofa
ENSNGAG00000011884	Prpf38a	100	93.590	ENSTGUG00000008995	PRPF38A	100	93.590	Taeniopygia_guttata
ENSNGAG00000011884	Prpf38a	72	88.235	ENSTRUG00000003374	prpf38a	71	87.446	Takifugu_rubripes
ENSNGAG00000011884	Prpf38a	72	86.547	ENSTNIG00000005533	prpf38a	100	80.511	Tetraodon_nigroviridis
ENSNGAG00000011884	Prpf38a	100	99.038	ENSTBEG00000000725	PRPF38A	100	99.038	Tupaia_belangeri
ENSNGAG00000011884	Prpf38a	100	99.679	ENSTTRG00000016139	PRPF38A	100	99.679	Tursiops_truncatus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSUAMG00000000625	PRPF38A	100	99.679	Ursus_americanus
ENSNGAG00000011884	Prpf38a	100	99.679	ENSUMAG00000022674	PRPF38A	100	99.679	Ursus_maritimus
ENSNGAG00000011884	Prpf38a	75	99.134	ENSVPAG00000000907	PRPF38A	100	93.910	Vicugna_pacos
ENSNGAG00000011884	Prpf38a	100	99.679	ENSVVUG00000004475	PRPF38A	100	99.679	Vulpes_vulpes
ENSNGAG00000011884	Prpf38a	100	84.345	ENSXETG00000008060	prpf38a	100	88.498	Xenopus_tropicalis
ENSNGAG00000011884	Prpf38a	72	88.341	ENSXCOG00000007393	prpf38a	100	84.839	Xiphophorus_couchianus
ENSNGAG00000011884	Prpf38a	72	90.498	ENSXMAG00000026143	prpf38a	100	84.566	Xiphophorus_maculatus