EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000011893 (Gene tree)
Gene ID: 103725758
Gene Symbol: Srbd1
Alias: D530025C17Rik
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 202837 bases
Position: chrKL205289.1:12686544-12889380
Accession: 103725758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009169	S1	PF00575.23	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000014678	-	3039	XM_008823071	ENSNGAP00000009169	1012 (aa)	XP_008821293	-

Gene Model

Click here to download ENSNGAG00000011893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000011893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000011893	Srbd1	100	82.405	ENSG00000068784	SRBD1	100	82.796	Homo_sapiens
ENSNGAG00000011893	Srbd1	99	50.430	ENSAPOG00000005103	si:ch211-117n7.8	99	50.430	Acanthochromis_polyacanthus
ENSNGAG00000011893	Srbd1	100	83.953	ENSAMEG00000005993	SRBD1	100	84.344	Ailuropoda_melanoleuca
ENSNGAG00000011893	Srbd1	83	55.736	ENSACIG00000009875	si:ch211-117n7.8	85	55.670	Amphilophus_citrinellus
ENSNGAG00000011893	Srbd1	99	50.526	ENSAOCG00000024718	si:ch211-117n7.8	99	50.672	Amphiprion_ocellaris
ENSNGAG00000011893	Srbd1	96	52.371	ENSAPEG00000002645	si:ch211-117n7.8	97	52.371	Amphiprion_percula
ENSNGAG00000011893	Srbd1	84	55.785	ENSATEG00000010844	si:ch211-117n7.8	98	50.929	Anabas_testudineus
ENSNGAG00000011893	Srbd1	100	68.726	ENSAPLG00000006313	SRBD1	100	68.822	Anas_platyrhynchos
ENSNGAG00000011893	Srbd1	100	82.307	ENSANAG00000025573	SRBD1	100	82.698	Aotus_nancymaae
ENSNGAG00000011893	Srbd1	99	49.252	ENSACLG00000024219	si:ch211-117n7.8	99	49.481	Astatotilapia_calliptera
ENSNGAG00000011893	Srbd1	92	56.217	ENSAMXG00000004294	SRBD1	93	55.453	Astyanax_mexicanus
ENSNGAG00000011893	Srbd1	95	89.873	ENSBTAG00000007508	SRBD1	99	89.873	Bos_taurus
ENSNGAG00000011893	Srbd1	100	81.720	ENSCJAG00000000727	SRBD1	100	82.111	Callithrix_jacchus
ENSNGAG00000011893	Srbd1	100	84.180	ENSCAFG00000002554	SRBD1	100	84.570	Canis_familiaris
ENSNGAG00000011893	Srbd1	100	81.329	ENSCAFG00020026284	SRBD1	99	86.636	Canis_lupus_dingo
ENSNGAG00000011893	Srbd1	100	82.583	ENSCHIG00000016535	SRBD1	98	82.583	Capra_hircus
ENSNGAG00000011893	Srbd1	100	83.723	ENSTSYG00000012797	SRBD1	100	84.016	Carlito_syrichta
ENSNGAG00000011893	Srbd1	100	83.513	ENSCPOG00000004773	SRBD1	100	83.513	Cavia_porcellus
ENSNGAG00000011893	Srbd1	100	82.600	ENSCCAG00000025589	SRBD1	100	82.991	Cebus_capucinus
ENSNGAG00000011893	Srbd1	100	83.382	ENSCATG00000039530	SRBD1	100	83.773	Cercocebus_atys
ENSNGAG00000011893	Srbd1	100	84.149	ENSCLAG00000008623	SRBD1	100	84.149	Chinchilla_lanigera
ENSNGAG00000011893	Srbd1	100	83.578	ENSCSAG00000013350	SRBD1	100	83.969	Chlorocebus_sabaeus
ENSNGAG00000011893	Srbd1	85	94.118	ENSCHOG00000003805	SRBD1	87	94.118	Choloepus_hoffmanni
ENSNGAG00000011893	Srbd1	100	70.537	ENSCPBG00000005677	SRBD1	100	70.674	Chrysemys_picta_bellii
ENSNGAG00000011893	Srbd1	79	42.118	ENSCING00000005950	-	99	42.118	Ciona_intestinalis
ENSNGAG00000011893	Srbd1	80	42.331	ENSCSAVG00000000861	-	99	42.331	Ciona_savignyi
ENSNGAG00000011893	Srbd1	99	83.235	ENSCANG00000016307	SRBD1	99	83.529	Colobus_angolensis_palliatus
ENSNGAG00000011893	Srbd1	100	86.673	ENSCGRG00001000513	Srbd1	100	86.673	Cricetulus_griseus_chok1gshd
ENSNGAG00000011893	Srbd1	100	86.673	ENSCGRG00000002283	Srbd1	100	86.673	Cricetulus_griseus_crigri
ENSNGAG00000011893	Srbd1	87	53.231	ENSCSEG00000000856	si:ch211-117n7.8	88	53.341	Cynoglossus_semilaevis
ENSNGAG00000011893	Srbd1	85	55.392	ENSCVAG00000020212	si:ch211-117n7.8	98	52.862	Cyprinodon_variegatus
ENSNGAG00000011893	Srbd1	100	83.155	ENSDNOG00000018686	SRBD1	100	83.447	Dasypus_novemcinctus
ENSNGAG00000011893	Srbd1	100	82.708	ENSDORG00000010468	Srbd1	100	82.708	Dipodomys_ordii
ENSNGAG00000011893	Srbd1	94	33.333	FBgn0051156	CG31156	98	33.760	Drosophila_melanogaster
ENSNGAG00000011893	Srbd1	90	77.148	ENSETEG00000000739	SRBD1	92	77.148	Echinops_telfairi
ENSNGAG00000011893	Srbd1	74	46.764	ENSEBUG00000008902	si:ch211-117n7.8	96	46.764	Eptatretus_burgeri
ENSNGAG00000011893	Srbd1	100	81.623	ENSEASG00005003132	SRBD1	97	89.809	Equus_asinus_asinus
ENSNGAG00000011893	Srbd1	100	84.653	ENSECAG00000013865	SRBD1	98	85.044	Equus_caballus
ENSNGAG00000011893	Srbd1	86	58.390	ENSELUG00000012592	si:ch211-117n7.8	92	54.141	Esox_lucius
ENSNGAG00000011893	Srbd1	100	84.653	ENSFCAG00000005101	SRBD1	100	85.044	Felis_catus
ENSNGAG00000011893	Srbd1	100	66.764	ENSFALG00000012966	SRBD1	100	66.862	Ficedula_albicollis
ENSNGAG00000011893	Srbd1	97	83.671	ENSFDAG00000016670	SRBD1	98	83.671	Fukomys_damarensis
ENSNGAG00000011893	Srbd1	84	56.422	ENSFHEG00000019480	si:ch211-117n7.8	82	56.422	Fundulus_heteroclitus
ENSNGAG00000011893	Srbd1	52	50.214	ENSGMOG00000018010	-	100	50.214	Gadus_morhua
ENSNGAG00000011893	Srbd1	100	67.285	ENSGALG00000009990	SRBD1	100	67.840	Gallus_gallus
ENSNGAG00000011893	Srbd1	85	55.290	ENSGAFG00000019664	si:ch211-117n7.8	84	55.290	Gambusia_affinis
ENSNGAG00000011893	Srbd1	63	57.669	ENSGACG00000010794	si:ch211-117n7.8	100	57.669	Gasterosteus_aculeatus
ENSNGAG00000011893	Srbd1	89	76.190	ENSGAGG00000006166	SRBD1	99	77.674	Gopherus_agassizii
ENSNGAG00000011893	Srbd1	97	83.333	ENSGGOG00000005910	SRBD1	100	83.333	Gorilla_gorilla
ENSNGAG00000011893	Srbd1	96	45.538	ENSHBUG00000013207	si:ch211-117n7.8	95	45.538	Haplochromis_burtoni
ENSNGAG00000011893	Srbd1	99	84.653	ENSHGLG00000018153	-	99	84.653	Heterocephalus_glaber_female
ENSNGAG00000011893	Srbd1	99	84.455	ENSHGLG00100015183	-	99	84.455	Heterocephalus_glaber_male
ENSNGAG00000011893	Srbd1	96	54.462	ENSIPUG00000009661	srbd1	99	53.095	Ictalurus_punctatus
ENSNGAG00000011893	Srbd1	100	85.192	ENSSTOG00000005898	SRBD1	100	85.192	Ictidomys_tridecemlineatus
ENSNGAG00000011893	Srbd1	100	80.826	ENSJJAG00000022244	Srbd1	100	80.826	Jaculus_jaculus
ENSNGAG00000011893	Srbd1	98	50.145	ENSKMAG00000003473	si:ch211-117n7.8	97	50.145	Kryptolebias_marmoratus
ENSNGAG00000011893	Srbd1	98	50.048	ENSLBEG00000027518	si:ch211-117n7.8	98	50.048	Labrus_bergylta
ENSNGAG00000011893	Srbd1	86	68.119	ENSLACG00000009790	SRBD1	100	68.119	Latimeria_chalumnae
ENSNGAG00000011893	Srbd1	96	57.114	ENSLOCG00000016360	si:ch211-117n7.8	99	56.043	Lepisosteus_oculatus
ENSNGAG00000011893	Srbd1	100	83.480	ENSMFAG00000042026	SRBD1	100	83.871	Macaca_fascicularis
ENSNGAG00000011893	Srbd1	100	83.382	ENSMMUG00000003490	SRBD1	100	83.773	Macaca_mulatta
ENSNGAG00000011893	Srbd1	100	80.938	ENSMNEG00000034701	SRBD1	100	81.329	Macaca_nemestrina
ENSNGAG00000011893	Srbd1	100	83.382	ENSMLEG00000000745	SRBD1	100	83.773	Mandrillus_leucophaeus
ENSNGAG00000011893	Srbd1	99	47.947	ENSMAMG00000021921	si:ch211-117n7.8	99	48.785	Mastacembelus_armatus
ENSNGAG00000011893	Srbd1	99	49.252	ENSMZEG00005027369	si:ch211-117n7.8	99	49.481	Maylandia_zebra
ENSNGAG00000011893	Srbd1	80	71.932	ENSMGAG00000010273	SRBD1	99	71.932	Meleagris_gallopavo
ENSNGAG00000011893	Srbd1	82	86.651	ENSMAUG00000013916	Srbd1	99	86.651	Mesocricetus_auratus
ENSNGAG00000011893	Srbd1	100	83.675	ENSMICG00000007835	SRBD1	100	84.066	Microcebus_murinus
ENSNGAG00000011893	Srbd1	100	84.857	ENSMOCG00000018716	Srbd1	100	84.857	Microtus_ochrogaster
ENSNGAG00000011893	Srbd1	84	54.483	ENSMMOG00000007507	si:ch211-117n7.8	87	54.483	Mola_mola
ENSNGAG00000011893	Srbd1	98	50.145	ENSMALG00000001562	si:ch211-117n7.8	98	50.242	Monopterus_albus
ENSNGAG00000011893	Srbd1	100	82.132	MGP_CAROLIEiJ_G0021934	Srbd1	99	87.622	Mus_caroli
ENSNGAG00000011893	Srbd1	100	82.626	ENSMUSG00000024135	Srbd1	100	82.626	Mus_musculus
ENSNGAG00000011893	Srbd1	100	81.737	MGP_PahariEiJ_G0020924	Srbd1	100	81.737	Mus_pahari
ENSNGAG00000011893	Srbd1	100	82.823	MGP_SPRETEiJ_G0022850	Srbd1	100	82.823	Mus_spretus
ENSNGAG00000011893	Srbd1	100	80.957	ENSMLUG00000007039	SRBD1	100	81.348	Myotis_lucifugus
ENSNGAG00000011893	Srbd1	84	54.051	ENSNBRG00000012873	si:ch211-117n7.8	99	49.111	Neolamprologus_brichardi
ENSNGAG00000011893	Srbd1	100	82.405	ENSNLEG00000016877	SRBD1	100	82.796	Nomascus_leucogenys
ENSNGAG00000011893	Srbd1	100	81.953	ENSODEG00000012095	SRBD1	100	81.953	Octodon_degus
ENSNGAG00000011893	Srbd1	99	49.390	ENSONIG00000000945	si:ch211-117n7.8	100	55.930	Oreochromis_niloticus
ENSNGAG00000011893	Srbd1	100	84.004	ENSOCUG00000015385	SRBD1	100	84.396	Oryctolagus_cuniculus
ENSNGAG00000011893	Srbd1	84	52.638	ENSORLG00000004427	si:ch211-117n7.8	82	52.638	Oryzias_latipes
ENSNGAG00000011893	Srbd1	98	50.097	ENSORLG00020012792	si:ch211-117n7.8	97	50.290	Oryzias_latipes_hni
ENSNGAG00000011893	Srbd1	98	50.145	ENSORLG00015018598	si:ch211-117n7.8	97	50.145	Oryzias_latipes_hsok
ENSNGAG00000011893	Srbd1	96	50.454	ENSOMEG00000012229	si:ch211-117n7.8	92	54.348	Oryzias_melastigma
ENSNGAG00000011893	Srbd1	100	78.376	ENSOGAG00000001076	SRBD1	100	78.376	Otolemur_garnettii
ENSNGAG00000011893	Srbd1	100	81.553	ENSOARG00000005958	SRBD1	100	81.553	Ovis_aries
ENSNGAG00000011893	Srbd1	100	82.698	ENSPPAG00000038442	SRBD1	100	83.089	Pan_paniscus
ENSNGAG00000011893	Srbd1	100	84.653	ENSPPRG00000003449	SRBD1	100	85.044	Panthera_pardus
ENSNGAG00000011893	Srbd1	100	84.751	ENSPTIG00000012495	SRBD1	100	85.142	Panthera_tigris_altaica
ENSNGAG00000011893	Srbd1	100	82.893	ENSPTRG00000011889	SRBD1	100	83.284	Pan_troglodytes
ENSNGAG00000011893	Srbd1	100	83.284	ENSPANG00000008063	SRBD1	100	83.675	Papio_anubis
ENSNGAG00000011893	Srbd1	84	57.728	ENSPKIG00000021973	si:ch211-117n7.8	98	52.243	Paramormyrops_kingsleyae
ENSNGAG00000011893	Srbd1	100	70.146	ENSPSIG00000008992	SRBD1	100	70.588	Pelodiscus_sinensis
ENSNGAG00000011893	Srbd1	89	51.795	ENSPMGG00000013348	si:ch211-117n7.8	99	49.468	Periophthalmus_magnuspinnatus
ENSNGAG00000011893	Srbd1	100	86.108	ENSPEMG00000020684	Srbd1	100	86.108	Peromyscus_maniculatus_bairdii
ENSNGAG00000011893	Srbd1	85	55.505	ENSPFOG00000010650	si:ch211-117n7.8	84	55.505	Poecilia_formosa
ENSNGAG00000011893	Srbd1	84	55.849	ENSPLAG00000002141	si:ch211-117n7.8	83	55.849	Poecilia_latipinna
ENSNGAG00000011893	Srbd1	85	55.619	ENSPMEG00000018537	si:ch211-117n7.8	84	55.619	Poecilia_mexicana
ENSNGAG00000011893	Srbd1	84	55.619	ENSPREG00000003258	si:ch211-117n7.8	85	55.619	Poecilia_reticulata
ENSNGAG00000011893	Srbd1	100	78.335	ENSPPYG00000012444	SRBD1	99	78.713	Pongo_abelii
ENSNGAG00000011893	Srbd1	83	78.093	ENSPCAG00000005629	SRBD1	86	78.093	Procavia_capensis
ENSNGAG00000011893	Srbd1	100	71.150	ENSPCOG00000017669	SRBD1	100	71.540	Propithecus_coquereli
ENSNGAG00000011893	Srbd1	100	71.652	ENSPVAG00000001782	SRBD1	100	72.043	Pteropus_vampyrus
ENSNGAG00000011893	Srbd1	85	52.359	ENSPNYG00000000508	si:ch211-117n7.8	86	52.359	Pundamilia_nyererei
ENSNGAG00000011893	Srbd1	96	54.813	ENSPNAG00000013492	SRBD1	99	53.475	Pygocentrus_nattereri
ENSNGAG00000011893	Srbd1	100	81.540	ENSRNOG00000014720	Srbd1	99	82.231	Rattus_norvegicus
ENSNGAG00000011893	Srbd1	99	82.745	ENSRBIG00000033486	SRBD1	99	83.137	Rhinopithecus_bieti
ENSNGAG00000011893	Srbd1	99	82.745	ENSRROG00000041599	SRBD1	99	83.137	Rhinopithecus_roxellana
ENSNGAG00000011893	Srbd1	100	82.129	ENSSBOG00000024982	SRBD1	100	82.520	Saimiri_boliviensis_boliviensis
ENSNGAG00000011893	Srbd1	84	57.688	ENSSFOG00015001128	si:ch211-117n7.8	90	57.688	Scleropages_formosus
ENSNGAG00000011893	Srbd1	84	55.683	ENSSMAG00000018256	si:ch211-117n7.8	82	55.683	Scophthalmus_maximus
ENSNGAG00000011893	Srbd1	84	55.454	ENSSLDG00000023189	si:ch211-117n7.8	83	55.454	Seriola_lalandi_dorsalis
ENSNGAG00000011893	Srbd1	100	74.384	ENSSARG00000009740	SRBD1	100	74.581	Sorex_araneus
ENSNGAG00000011893	Srbd1	89	73.860	ENSSPUG00000010475	SRBD1	97	73.725	Sphenodon_punctatus
ENSNGAG00000011893	Srbd1	84	53.494	ENSSPAG00000008092	-	93	50.050	Stegastes_partitus
ENSNGAG00000011893	Srbd1	100	83.855	ENSSSCG00000008445	SRBD1	98	83.855	Sus_scrofa
ENSNGAG00000011893	Srbd1	84	74.476	ENSTGUG00000003878	SRBD1	100	74.476	Taeniopygia_guttata
ENSNGAG00000011893	Srbd1	99	48.831	ENSTRUG00000007080	si:ch211-117n7.8	99	49.250	Takifugu_rubripes
ENSNGAG00000011893	Srbd1	99	48.476	ENSTNIG00000007464	si:ch211-117n7.8	99	48.476	Tetraodon_nigroviridis
ENSNGAG00000011893	Srbd1	74	98.936	ENSTBEG00000004556	SRBD1	76	98.936	Tupaia_belangeri
ENSNGAG00000011893	Srbd1	94	82.661	ENSTTRG00000011871	SRBD1	94	82.661	Tursiops_truncatus
ENSNGAG00000011893	Srbd1	100	84.262	ENSUAMG00000008126	SRBD1	100	84.653	Ursus_americanus
ENSNGAG00000011893	Srbd1	100	83.773	ENSUMAG00000012902	SRBD1	98	84.164	Ursus_maritimus
ENSNGAG00000011893	Srbd1	91	84.946	ENSVPAG00000006825	SRBD1	99	84.946	Vicugna_pacos
ENSNGAG00000011893	Srbd1	100	84.540	ENSVVUG00000005389	SRBD1	99	88.608	Vulpes_vulpes
ENSNGAG00000011893	Srbd1	100	51.616	ENSXETG00000002760	srbd1	100	52.124	Xenopus_tropicalis
ENSNGAG00000011893	Srbd1	99	49.707	ENSXMAG00000016861	si:ch211-117n7.8	98	49.707	Xiphophorus_maculatus