EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000012093 (Gene tree)
Gene ID: 103738939
Gene Symbol: Sbds
Alias: 4733401P19Rik|Shwachman-Bodian-Diamond syndrome homolog (human)
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 7424 bases
Position: chrKL201844.1:402792-410215
Accession: 103738939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009395	SBDS	PF01172.18	5.9e-33	1	1
ENSNGAP00000009395	SBDS_C	PF09377.10	4.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000014906	-	1205	XM_008839140	ENSNGAP00000009395	250 (aa)	XP_008837362	UPI0004ED1E58

Gene Model

Click here to download ENSNGAG00000012093's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012093	Sbds	100	97.600	ENSG00000126524	SBDS	100	97.600	Homo_sapiens
ENSNGAG00000012093	Sbds	99	84.337	ENSAPOG00000014285	sbds	100	84.337	Acanthochromis_polyacanthus
ENSNGAG00000012093	Sbds	100	97.200	ENSAMEG00000018167	SBDS	100	97.200	Ailuropoda_melanoleuca
ENSNGAG00000012093	Sbds	99	84.127	ENSACIG00000007308	sbds	100	84.127	Amphilophus_citrinellus
ENSNGAG00000012093	Sbds	99	84.337	ENSAOCG00000016770	sbds	100	84.337	Amphiprion_ocellaris
ENSNGAG00000012093	Sbds	99	84.739	ENSAPEG00000015897	sbds	100	84.739	Amphiprion_percula
ENSNGAG00000012093	Sbds	99	83.936	ENSATEG00000006901	sbds	100	83.936	Anabas_testudineus
ENSNGAG00000012093	Sbds	92	90.909	ENSANAG00000024342	-	97	90.909	Aotus_nancymaae
ENSNGAG00000012093	Sbds	83	96.618	ENSANAG00000037501	-	100	96.618	Aotus_nancymaae
ENSNGAG00000012093	Sbds	99	85.542	ENSACLG00000018750	sbds	100	85.542	Astatotilapia_calliptera
ENSNGAG00000012093	Sbds	100	85.600	ENSAMXG00000005361	sbds	100	85.600	Astyanax_mexicanus
ENSNGAG00000012093	Sbds	100	98.000	ENSBTAG00000004051	SBDS	100	98.000	Bos_taurus
ENSNGAG00000012093	Sbds	98	58.130	WBGene00021063	sbds-1	97	58.130	Caenorhabditis_elegans
ENSNGAG00000012093	Sbds	100	97.200	ENSCJAG00000041007	SBDS	100	97.200	Callithrix_jacchus
ENSNGAG00000012093	Sbds	100	94.444	ENSCAFG00000010797	SBDS	100	94.444	Canis_familiaris
ENSNGAG00000012093	Sbds	100	96.800	ENSCAFG00020005357	SBDS	100	96.800	Canis_lupus_dingo
ENSNGAG00000012093	Sbds	100	98.000	ENSCHIG00000026854	SBDS	100	98.000	Capra_hircus
ENSNGAG00000012093	Sbds	100	97.600	ENSTSYG00000033822	SBDS	100	97.600	Carlito_syrichta
ENSNGAG00000012093	Sbds	66	97.561	ENSCAPG00000006634	SBDS	100	97.561	Cavia_aperea
ENSNGAG00000012093	Sbds	100	98.400	ENSCPOG00000036143	SBDS	100	98.400	Cavia_porcellus
ENSNGAG00000012093	Sbds	100	97.200	ENSCCAG00000020671	SBDS	100	97.200	Cebus_capucinus
ENSNGAG00000012093	Sbds	100	97.600	ENSCATG00000039026	SBDS	100	97.600	Cercocebus_atys
ENSNGAG00000012093	Sbds	100	98.000	ENSCLAG00000005721	-	100	98.000	Chinchilla_lanigera
ENSNGAG00000012093	Sbds	99	70.968	ENSCLAG00000002113	-	99	70.968	Chinchilla_lanigera
ENSNGAG00000012093	Sbds	100	97.600	ENSCSAG00000018275	SBDS	100	97.600	Chlorocebus_sabaeus
ENSNGAG00000012093	Sbds	100	93.200	ENSCHOG00000003795	SBDS	100	93.200	Choloepus_hoffmanni
ENSNGAG00000012093	Sbds	100	89.200	ENSCPBG00000014893	SBDS	100	89.200	Chrysemys_picta_bellii
ENSNGAG00000012093	Sbds	99	67.339	ENSCSAVG00000011811	-	99	67.339	Ciona_savignyi
ENSNGAG00000012093	Sbds	100	97.200	ENSCANG00000032368	SBDS	100	97.200	Colobus_angolensis_palliatus
ENSNGAG00000012093	Sbds	66	97.561	ENSCGRG00001019886	Sbds	100	97.561	Cricetulus_griseus_chok1gshd
ENSNGAG00000012093	Sbds	83	98.068	ENSCGRG00000009211	Sbds	100	98.068	Cricetulus_griseus_crigri
ENSNGAG00000012093	Sbds	99	81.928	ENSCSEG00000005798	sbds	100	81.928	Cynoglossus_semilaevis
ENSNGAG00000012093	Sbds	99	83.133	ENSCVAG00000001053	sbds	100	83.133	Cyprinodon_variegatus
ENSNGAG00000012093	Sbds	100	84.800	ENSDARG00000027803	sbds	100	84.800	Danio_rerio
ENSNGAG00000012093	Sbds	100	97.200	ENSDNOG00000041174	SBDS	100	97.200	Dasypus_novemcinctus
ENSNGAG00000012093	Sbds	100	98.400	ENSDORG00000026218	Sbds	100	98.400	Dipodomys_ordii
ENSNGAG00000012093	Sbds	90	59.211	FBgn0035714	CG8549	98	59.514	Drosophila_melanogaster
ENSNGAG00000012093	Sbds	93	59.227	ENSEBUG00000015780	sbds	100	59.227	Eptatretus_burgeri
ENSNGAG00000012093	Sbds	100	98.000	ENSEASG00005008821	SBDS	100	98.000	Equus_asinus_asinus
ENSNGAG00000012093	Sbds	100	98.000	ENSECAG00000008202	SBDS	100	98.000	Equus_caballus
ENSNGAG00000012093	Sbds	83	75.000	ENSEEUG00000004768	SBDS	100	75.000	Erinaceus_europaeus
ENSNGAG00000012093	Sbds	100	82.800	ENSELUG00000008382	sbds	100	82.800	Esox_lucius
ENSNGAG00000012093	Sbds	100	97.600	ENSFCAG00000022142	SBDS	100	97.600	Felis_catus
ENSNGAG00000012093	Sbds	100	90.000	ENSFALG00000013808	SBDS	100	90.000	Ficedula_albicollis
ENSNGAG00000012093	Sbds	100	98.400	ENSFDAG00000018947	-	100	98.400	Fukomys_damarensis
ENSNGAG00000012093	Sbds	99	79.920	ENSFHEG00000000708	sbds	100	79.920	Fundulus_heteroclitus
ENSNGAG00000012093	Sbds	100	84.400	ENSGMOG00000018356	sbds	99	84.400	Gadus_morhua
ENSNGAG00000012093	Sbds	100	89.600	ENSGALG00000027989	SBDS	100	89.600	Gallus_gallus
ENSNGAG00000012093	Sbds	92	80.000	ENSGAFG00000014204	sbds	100	80.000	Gambusia_affinis
ENSNGAG00000012093	Sbds	99	82.731	ENSGACG00000012697	sbds	100	82.731	Gasterosteus_aculeatus
ENSNGAG00000012093	Sbds	86	89.252	ENSGAGG00000022402	SBDS	100	89.252	Gopherus_agassizii
ENSNGAG00000012093	Sbds	96	77.178	ENSGGOG00000040023	-	92	77.178	Gorilla_gorilla
ENSNGAG00000012093	Sbds	99	85.542	ENSHBUG00000002660	sbds	100	85.542	Haplochromis_burtoni
ENSNGAG00000012093	Sbds	100	96.800	ENSHGLG00000009671	SBDS	100	96.800	Heterocephalus_glaber_female
ENSNGAG00000012093	Sbds	100	96.800	ENSHGLG00100011332	SBDS	100	96.800	Heterocephalus_glaber_male
ENSNGAG00000012093	Sbds	99	81.928	ENSHCOG00000018606	sbds	100	81.928	Hippocampus_comes
ENSNGAG00000012093	Sbds	100	85.600	ENSIPUG00000006536	sbds	100	85.600	Ictalurus_punctatus
ENSNGAG00000012093	Sbds	100	94.400	ENSJJAG00000012033	-	100	94.400	Jaculus_jaculus
ENSNGAG00000012093	Sbds	100	69.960	ENSJJAG00000003934	-	100	69.960	Jaculus_jaculus
ENSNGAG00000012093	Sbds	99	84.739	ENSKMAG00000018542	sbds	100	84.739	Kryptolebias_marmoratus
ENSNGAG00000012093	Sbds	99	82.329	ENSLBEG00000016687	sbds	100	82.329	Labrus_bergylta
ENSNGAG00000012093	Sbds	100	70.866	ENSLACG00000018916	SBDS	100	70.866	Latimeria_chalumnae
ENSNGAG00000012093	Sbds	100	86.800	ENSLOCG00000004073	sbds	100	86.800	Lepisosteus_oculatus
ENSNGAG00000012093	Sbds	100	96.800	ENSLAFG00000008763	SBDS	100	96.800	Loxodonta_africana
ENSNGAG00000012093	Sbds	100	97.600	ENSMFAG00000032620	SBDS	100	97.600	Macaca_fascicularis
ENSNGAG00000012093	Sbds	100	97.600	ENSMMUG00000045653	SBDS	100	97.600	Macaca_mulatta
ENSNGAG00000012093	Sbds	100	97.600	ENSMNEG00000031523	SBDS	100	97.600	Macaca_nemestrina
ENSNGAG00000012093	Sbds	100	74.409	ENSMLEG00000036826	SBDS	100	74.409	Mandrillus_leucophaeus
ENSNGAG00000012093	Sbds	99	84.337	ENSMAMG00000016062	sbds	100	84.337	Mastacembelus_armatus
ENSNGAG00000012093	Sbds	99	85.542	ENSMZEG00005024385	sbds	100	85.542	Maylandia_zebra
ENSNGAG00000012093	Sbds	100	89.600	ENSMGAG00000002119	SBDS	100	89.600	Meleagris_gallopavo
ENSNGAG00000012093	Sbds	99	78.715	ENSMAUG00000022214	-	100	78.715	Mesocricetus_auratus
ENSNGAG00000012093	Sbds	100	98.000	ENSMICG00000014366	SBDS	100	98.000	Microcebus_murinus
ENSNGAG00000012093	Sbds	100	99.200	ENSMOCG00000011739	Sbds	100	99.200	Microtus_ochrogaster
ENSNGAG00000012093	Sbds	99	74.000	ENSMMOG00000005061	sbds	100	74.000	Mola_mola
ENSNGAG00000012093	Sbds	100	96.000	ENSMODG00000006644	SBDS	100	96.000	Monodelphis_domestica
ENSNGAG00000012093	Sbds	99	84.337	ENSMALG00000010219	sbds	100	84.337	Monopterus_albus
ENSNGAG00000012093	Sbds	100	99.200	MGP_CAROLIEiJ_G0027800	Sbds	100	99.200	Mus_caroli
ENSNGAG00000012093	Sbds	100	98.800	ENSMUSG00000025337	Sbds	100	98.800	Mus_musculus
ENSNGAG00000012093	Sbds	100	98.800	MGP_PahariEiJ_G0024384	Sbds	100	98.800	Mus_pahari
ENSNGAG00000012093	Sbds	100	98.800	MGP_SPRETEiJ_G0028798	Sbds	100	98.800	Mus_spretus
ENSNGAG00000012093	Sbds	67	94.048	ENSMPUG00000016192	SBDS	97	94.048	Mustela_putorius_furo
ENSNGAG00000012093	Sbds	73	94.505	ENSMLUG00000013575	SBDS	100	94.505	Myotis_lucifugus
ENSNGAG00000012093	Sbds	99	85.542	ENSNBRG00000017027	sbds	100	85.542	Neolamprologus_brichardi
ENSNGAG00000012093	Sbds	100	97.600	ENSNLEG00000013288	SBDS	100	97.600	Nomascus_leucogenys
ENSNGAG00000012093	Sbds	100	96.000	ENSOPRG00000008721	SBDS	100	96.000	Ochotona_princeps
ENSNGAG00000012093	Sbds	100	88.800	ENSODEG00000019253	-	84	88.800	Octodon_degus
ENSNGAG00000012093	Sbds	99	73.494	ENSODEG00000000137	-	85	76.800	Octodon_degus
ENSNGAG00000012093	Sbds	99	77.912	ENSODEG00000001116	-	99	77.912	Octodon_degus
ENSNGAG00000012093	Sbds	99	84.739	ENSONIG00000005874	sbds	100	84.739	Oreochromis_niloticus
ENSNGAG00000012093	Sbds	83	90.338	ENSOANG00000007674	-	100	90.338	Ornithorhynchus_anatinus
ENSNGAG00000012093	Sbds	100	96.800	ENSOCUG00000003170	SBDS	100	96.800	Oryctolagus_cuniculus
ENSNGAG00000012093	Sbds	99	81.526	ENSORLG00000023489	sbds	100	81.526	Oryzias_latipes
ENSNGAG00000012093	Sbds	99	81.124	ENSORLG00020019282	sbds	100	81.124	Oryzias_latipes_hni
ENSNGAG00000012093	Sbds	99	81.124	ENSORLG00015008005	sbds	100	81.124	Oryzias_latipes_hsok
ENSNGAG00000012093	Sbds	99	81.928	ENSOMEG00000022747	sbds	100	81.928	Oryzias_melastigma
ENSNGAG00000012093	Sbds	100	82.000	ENSOGAG00000015036	-	100	82.000	Otolemur_garnettii
ENSNGAG00000012093	Sbds	100	97.600	ENSOGAG00000009011	-	100	97.600	Otolemur_garnettii
ENSNGAG00000012093	Sbds	100	98.000	ENSOARG00000010609	SBDS	100	98.000	Ovis_aries
ENSNGAG00000012093	Sbds	100	96.800	ENSPPAG00000043889	-	100	96.800	Pan_paniscus
ENSNGAG00000012093	Sbds	100	97.600	ENSPPRG00000002307	SBDS	100	97.600	Panthera_pardus
ENSNGAG00000012093	Sbds	100	97.600	ENSPTIG00000021308	SBDS	100	97.600	Panthera_tigris_altaica
ENSNGAG00000012093	Sbds	100	97.600	ENSPTRG00000019254	SBDS	100	97.600	Pan_troglodytes
ENSNGAG00000012093	Sbds	100	82.800	ENSPTRG00000050835	-	100	82.800	Pan_troglodytes
ENSNGAG00000012093	Sbds	87	95.392	ENSPTRG00000048174	-	96	95.392	Pan_troglodytes
ENSNGAG00000012093	Sbds	100	82.400	ENSPTRG00000047744	-	100	82.400	Pan_troglodytes
ENSNGAG00000012093	Sbds	100	97.200	ENSPANG00000004078	SBDS	100	97.200	Papio_anubis
ENSNGAG00000012093	Sbds	100	85.600	ENSPKIG00000006489	sbds	100	85.600	Paramormyrops_kingsleyae
ENSNGAG00000012093	Sbds	83	89.855	ENSPSIG00000014603	SBDS	99	89.855	Pelodiscus_sinensis
ENSNGAG00000012093	Sbds	99	83.133	ENSPMGG00000004246	sbds	100	83.133	Periophthalmus_magnuspinnatus
ENSNGAG00000012093	Sbds	100	99.600	ENSPEMG00000008728	Sbds	100	99.600	Peromyscus_maniculatus_bairdii
ENSNGAG00000012093	Sbds	100	95.200	ENSPCIG00000029718	SBDS	100	95.200	Phascolarctos_cinereus
ENSNGAG00000012093	Sbds	99	82.329	ENSPFOG00000015837	sbds	100	82.329	Poecilia_formosa
ENSNGAG00000012093	Sbds	99	82.329	ENSPLAG00000003641	sbds	100	82.329	Poecilia_latipinna
ENSNGAG00000012093	Sbds	99	82.329	ENSPMEG00000019483	sbds	100	82.329	Poecilia_mexicana
ENSNGAG00000012093	Sbds	99	81.928	ENSPREG00000018758	sbds	100	81.928	Poecilia_reticulata
ENSNGAG00000012093	Sbds	100	97.600	ENSPPYG00000017513	SBDS	100	97.600	Pongo_abelii
ENSNGAG00000012093	Sbds	100	98.000	ENSPCOG00000021098	SBDS	100	98.000	Propithecus_coquereli
ENSNGAG00000012093	Sbds	100	97.600	ENSPVAG00000009369	SBDS	100	97.600	Pteropus_vampyrus
ENSNGAG00000012093	Sbds	99	85.141	ENSPNYG00000022403	sbds	100	85.141	Pundamilia_nyererei
ENSNGAG00000012093	Sbds	100	86.400	ENSPNAG00000001120	sbds	100	86.400	Pygocentrus_nattereri
ENSNGAG00000012093	Sbds	100	98.800	ENSRNOG00000000888	Sbds	100	98.800	Rattus_norvegicus
ENSNGAG00000012093	Sbds	100	97.600	ENSRBIG00000035557	SBDS	100	97.600	Rhinopithecus_bieti
ENSNGAG00000012093	Sbds	100	79.600	ENSRROG00000041986	-	100	77.600	Rhinopithecus_roxellana
ENSNGAG00000012093	Sbds	100	97.600	ENSRROG00000040842	-	100	97.600	Rhinopithecus_roxellana
ENSNGAG00000012093	Sbds	96	43.673	YLR022C	-	96	42.276	Saccharomyces_cerevisiae
ENSNGAG00000012093	Sbds	93	96.552	ENSSBOG00000022460	SBDS	100	96.552	Saimiri_boliviensis_boliviensis
ENSNGAG00000012093	Sbds	100	82.400	ENSSHAG00000010263	SBDS	100	82.400	Sarcophilus_harrisii
ENSNGAG00000012093	Sbds	100	86.800	ENSSFOG00015001108	sbds	100	86.800	Scleropages_formosus
ENSNGAG00000012093	Sbds	99	84.337	ENSSMAG00000020506	sbds	100	84.337	Scophthalmus_maximus
ENSNGAG00000012093	Sbds	99	83.936	ENSSDUG00000001528	sbds	100	83.936	Seriola_dumerili
ENSNGAG00000012093	Sbds	99	84.337	ENSSLDG00000003659	sbds	100	84.337	Seriola_lalandi_dorsalis
ENSNGAG00000012093	Sbds	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSNGAG00000012093	Sbds	61	98.039	ENSSARG00000013132	-	100	98.039	Sorex_araneus
ENSNGAG00000012093	Sbds	100	86.400	ENSSPUG00000002699	SBDS	100	86.400	Sphenodon_punctatus
ENSNGAG00000012093	Sbds	99	84.337	ENSSPAG00000016419	sbds	100	76.800	Stegastes_partitus
ENSNGAG00000012093	Sbds	100	97.600	ENSSSCG00000007732	SBDS	100	97.600	Sus_scrofa
ENSNGAG00000012093	Sbds	66	90.303	ENSTGUG00000003426	SBDS	99	90.303	Taeniopygia_guttata
ENSNGAG00000012093	Sbds	99	83.534	ENSTRUG00000021443	sbds	100	83.534	Takifugu_rubripes
ENSNGAG00000012093	Sbds	99	83.133	ENSTNIG00000019000	sbds	100	83.133	Tetraodon_nigroviridis
ENSNGAG00000012093	Sbds	83	83.654	ENSTBEG00000001178	SBDS	100	83.654	Tupaia_belangeri
ENSNGAG00000012093	Sbds	100	78.800	ENSTTRG00000003921	SBDS	100	78.800	Tursiops_truncatus
ENSNGAG00000012093	Sbds	100	97.200	ENSUAMG00000001326	SBDS	100	97.200	Ursus_americanus
ENSNGAG00000012093	Sbds	100	97.200	ENSUMAG00000015353	SBDS	100	97.200	Ursus_maritimus
ENSNGAG00000012093	Sbds	100	96.800	ENSVVUG00000016478	SBDS	100	96.800	Vulpes_vulpes
ENSNGAG00000012093	Sbds	100	86.000	ENSXETG00000010093	sbds	100	86.000	Xenopus_tropicalis
ENSNGAG00000012093	Sbds	99	75.100	ENSXCOG00000010639	sbds	100	75.100	Xiphophorus_couchianus
ENSNGAG00000012093	Sbds	99	82.731	ENSXMAG00000006065	sbds	100	82.731	Xiphophorus_maculatus