EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000012151 (Gene tree)
Gene ID: 103724428
Gene Symbol: Vars
Alias: Bat-6|Bat6|D17H6S56E|G7a|Vars2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 12631 bases
Position: chrKL205017.1:516211-528841
Accession: 103724428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009549	tRNA-synt_1g	PF09334.11	3.3e-11	1	1
ENSNGAP00000009557	tRNA-synt_1g	PF09334.11	3.4e-11	1	1
ENSNGAP00000009549	Anticodon_1	PF08264.13	1.3e-32	1	1
ENSNGAP00000009557	Anticodon_1	PF08264.13	1.4e-32	1	1
ENSNGAP00000009549	tRNA-synt_1	PF00133.22	1.8e-201	1	1
ENSNGAP00000009557	tRNA-synt_1	PF00133.22	1.9e-201	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015064	-	4029	XM_008821507	ENSNGAP00000009549	1263 (aa)	XP_008819729	UPI0004ED598E
ENSNGAT00000015071	-	3810	-	ENSNGAP00000009557	1270 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000012151's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000012151	Vars	78	48.234	ENSNGAG00000020607	Vars2	91	48.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012151	Vars	100	92.484	ENSG00000204394	VARS	100	92.168	Homo_sapiens
ENSNGAG00000012151	Vars	98	64.796	ENSAPOG00000020691	vars	99	64.366	Acanthochromis_polyacanthus
ENSNGAG00000012151	Vars	98	64.796	ENSAPOG00000020921	vars	99	64.366	Acanthochromis_polyacanthus
ENSNGAG00000012151	Vars	100	92.727	ENSAMEG00000006417	VARS	100	92.332	Ailuropoda_melanoleuca
ENSNGAG00000012151	Vars	100	65.385	ENSACIG00000013752	vars	100	65.303	Amphilophus_citrinellus
ENSNGAG00000012151	Vars	100	64.875	ENSAOCG00000002447	vars	100	64.101	Amphiprion_ocellaris
ENSNGAG00000012151	Vars	100	64.875	ENSAPEG00000010638	vars	99	64.825	Amphiprion_percula
ENSNGAG00000012151	Vars	100	64.724	ENSATEG00000020219	vars	100	64.303	Anabas_testudineus
ENSNGAG00000012151	Vars	90	70.451	ENSACAG00000029133	-	99	70.191	Anolis_carolinensis
ENSNGAG00000012151	Vars	100	92.405	ENSANAG00000015453	VARS	100	92.089	Aotus_nancymaae
ENSNGAG00000012151	Vars	100	64.546	ENSACLG00000025699	vars	97	64.463	Astatotilapia_calliptera
ENSNGAG00000012151	Vars	94	66.639	ENSAMXG00000017716	vars	95	66.277	Astyanax_mexicanus
ENSNGAG00000012151	Vars	100	92.722	ENSBTAG00000005631	VARS	100	92.405	Bos_taurus
ENSNGAG00000012151	Vars	100	92.168	ENSCJAG00000002604	VARS	100	91.851	Callithrix_jacchus
ENSNGAG00000012151	Vars	100	91.930	ENSCAFG00000000636	VARS	100	91.535	Canis_familiaris
ENSNGAG00000012151	Vars	94	92.230	ENSCAFG00020020790	VARS	99	89.714	Canis_lupus_dingo
ENSNGAG00000012151	Vars	100	92.722	ENSCHIG00000011008	VARS	100	92.405	Capra_hircus
ENSNGAG00000012151	Vars	100	92.801	ENSTSYG00000001567	VARS	100	92.484	Carlito_syrichta
ENSNGAG00000012151	Vars	91	90.571	ENSCAPG00000013736	VARS	99	90.138	Cavia_aperea
ENSNGAG00000012151	Vars	100	91.456	ENSCPOG00000000870	VARS	100	91.060	Cavia_porcellus
ENSNGAG00000012151	Vars	100	91.930	ENSCCAG00000035656	VARS	100	93.532	Cebus_capucinus
ENSNGAG00000012151	Vars	100	91.930	ENSCATG00000022394	VARS	100	91.930	Cercocebus_atys
ENSNGAG00000012151	Vars	93	87.137	ENSCLAG00000009470	VARS	98	85.749	Chinchilla_lanigera
ENSNGAG00000012151	Vars	100	92.326	ENSCSAG00000008784	VARS	100	92.326	Chlorocebus_sabaeus
ENSNGAG00000012151	Vars	77	74.743	ENSCPBG00000007943	VARS	96	74.846	Chrysemys_picta_bellii
ENSNGAG00000012151	Vars	100	92.247	ENSCANG00000033570	VARS	100	92.247	Colobus_angolensis_palliatus
ENSNGAG00000012151	Vars	100	93.829	ENSCGRG00001005686	Vars	100	93.513	Cricetulus_griseus_chok1gshd
ENSNGAG00000012151	Vars	92	88.861	ENSCGRG00000013352	Vars	78	88.526	Cricetulus_griseus_crigri
ENSNGAG00000012151	Vars	100	64.218	ENSCSEG00000019652	vars	100	64.082	Cynoglossus_semilaevis
ENSNGAG00000012151	Vars	100	65.163	ENSCVAG00000022398	vars	100	65.163	Cyprinodon_variegatus
ENSNGAG00000012151	Vars	100	65.058	ENSDARG00000044575	vars	100	65.241	Danio_rerio
ENSNGAG00000012151	Vars	84	92.286	ENSDORG00000016433	Vars	95	92.286	Dipodomys_ordii
ENSNGAG00000012151	Vars	68	86.438	ENSETEG00000003824	VARS	76	86.438	Echinops_telfairi
ENSNGAG00000012151	Vars	57	61.813	ENSEBUG00000004637	vars	100	62.088	Eptatretus_burgeri
ENSNGAG00000012151	Vars	50	70.780	ENSEBUG00000007086	vars	84	69.634	Eptatretus_burgeri
ENSNGAG00000012151	Vars	100	93.354	ENSEASG00005015673	VARS	100	93.038	Equus_asinus_asinus
ENSNGAG00000012151	Vars	100	92.727	ENSECAG00000014620	VARS	100	92.885	Equus_caballus
ENSNGAG00000012151	Vars	78	89.619	ENSEEUG00000004116	VARS	80	89.619	Erinaceus_europaeus
ENSNGAG00000012151	Vars	100	64.706	ENSELUG00000006550	vars	97	64.164	Esox_lucius
ENSNGAG00000012151	Vars	100	92.563	ENSFCAG00000004510	VARS	100	92.089	Felis_catus
ENSNGAG00000012151	Vars	82	92.680	ENSFDAG00000011401	VARS	100	92.268	Fukomys_damarensis
ENSNGAG00000012151	Vars	100	65.268	ENSFHEG00000010672	vars	100	65.163	Fundulus_heteroclitus
ENSNGAG00000012151	Vars	92	66.278	ENSGMOG00000014908	vars	97	66.278	Gadus_morhua
ENSNGAG00000012151	Vars	100	65.576	ENSGAFG00000021630	vars	100	65.576	Gambusia_affinis
ENSNGAG00000012151	Vars	92	66.303	ENSGACG00000009601	vars	98	65.945	Gasterosteus_aculeatus
ENSNGAG00000012151	Vars	50	64.771	ENSGAGG00000006508	-	91	64.490	Gopherus_agassizii
ENSNGAG00000012151	Vars	100	92.326	ENSGGOG00000011364	VARS	100	92.326	Gorilla_gorilla
ENSNGAG00000012151	Vars	100	64.546	ENSHBUG00000017151	vars	97	64.463	Haplochromis_burtoni
ENSNGAG00000012151	Vars	100	90.499	ENSHGLG00000011646	VARS	100	90.499	Heterocephalus_glaber_female
ENSNGAG00000012151	Vars	93	83.458	ENSHGLG00100018062	VARS	100	83.375	Heterocephalus_glaber_male
ENSNGAG00000012151	Vars	99	64.308	ENSHCOG00000012198	vars	99	63.969	Hippocampus_comes
ENSNGAG00000012151	Vars	100	65.525	ENSIPUG00000005218	vars	100	65.708	Ictalurus_punctatus
ENSNGAG00000012151	Vars	100	93.597	ENSSTOG00000013112	VARS	100	93.597	Ictidomys_tridecemlineatus
ENSNGAG00000012151	Vars	100	92.563	ENSJJAG00000019749	-	100	92.162	Jaculus_jaculus
ENSNGAG00000012151	Vars	100	73.576	ENSJJAG00000015343	-	100	73.159	Jaculus_jaculus
ENSNGAG00000012151	Vars	100	65.012	ENSKMAG00000009455	vars	100	65.012	Kryptolebias_marmoratus
ENSNGAG00000012151	Vars	100	64.455	ENSLBEG00000010341	vars	100	64.038	Labrus_bergylta
ENSNGAG00000012151	Vars	94	62.120	ENSLACG00000015232	VARS	99	62.038	Latimeria_chalumnae
ENSNGAG00000012151	Vars	100	66.327	ENSLOCG00000004240	vars	100	66.327	Lepisosteus_oculatus
ENSNGAG00000012151	Vars	100	91.370	ENSLAFG00000023090	VARS	100	91.370	Loxodonta_africana
ENSNGAG00000012151	Vars	100	92.326	ENSMFAG00000001032	VARS	100	92.326	Macaca_fascicularis
ENSNGAG00000012151	Vars	100	92.326	ENSMMUG00000006828	VARS	100	92.326	Macaca_mulatta
ENSNGAG00000012151	Vars	100	92.484	ENSMNEG00000042072	VARS	100	92.484	Macaca_nemestrina
ENSNGAG00000012151	Vars	100	92.247	ENSMLEG00000039307	VARS	100	92.247	Mandrillus_leucophaeus
ENSNGAG00000012151	Vars	100	64.899	ENSMAMG00000003949	vars	100	64.793	Mastacembelus_armatus
ENSNGAG00000012151	Vars	100	64.546	ENSMZEG00005018327	vars	100	64.218	Maylandia_zebra
ENSNGAG00000012151	Vars	100	93.750	ENSMAUG00000006715	Vars	100	93.434	Mesocricetus_auratus
ENSNGAG00000012151	Vars	100	92.484	ENSMICG00000003548	VARS	100	93.781	Microcebus_murinus
ENSNGAG00000012151	Vars	100	91.211	ENSMOCG00000015404	Vars	100	91.211	Microtus_ochrogaster
ENSNGAG00000012151	Vars	100	64.364	ENSMMOG00000015801	vars	100	64.179	Mola_mola
ENSNGAG00000012151	Vars	100	85.127	ENSMODG00000015204	-	100	85.127	Monodelphis_domestica
ENSNGAG00000012151	Vars	99	64.539	ENSMALG00000022532	vars	99	64.313	Monopterus_albus
ENSNGAG00000012151	Vars	100	93.983	MGP_CAROLIEiJ_G0021491	Vars	100	93.983	Mus_caroli
ENSNGAG00000012151	Vars	100	93.824	ENSMUSG00000007029	Vars	100	93.824	Mus_musculus
ENSNGAG00000012151	Vars	100	93.983	MGP_PahariEiJ_G0020486	Vars	100	93.983	Mus_pahari
ENSNGAG00000012151	Vars	100	93.903	MGP_SPRETEiJ_G0022396	Vars	100	93.903	Mus_spretus
ENSNGAG00000012151	Vars	100	92.722	ENSMPUG00000010821	VARS	100	92.326	Mustela_putorius_furo
ENSNGAG00000012151	Vars	78	92.105	ENSMLUG00000013126	VARS	100	92.409	Myotis_lucifugus
ENSNGAG00000012151	Vars	100	64.336	ENSNBRG00000020520	vars	100	64.230	Neolamprologus_brichardi
ENSNGAG00000012151	Vars	100	92.089	ENSNLEG00000006351	VARS	100	91.772	Nomascus_leucogenys
ENSNGAG00000012151	Vars	100	82.199	ENSMEUG00000011378	VARS	100	82.120	Notamacropus_eugenii
ENSNGAG00000012151	Vars	100	92.801	ENSOPRG00000003607	VARS	100	92.484	Ochotona_princeps
ENSNGAG00000012151	Vars	100	91.139	ENSODEG00000017681	VARS	100	90.974	Octodon_degus
ENSNGAG00000012151	Vars	100	64.789	ENSONIG00000013064	vars	99	67.885	Oreochromis_niloticus
ENSNGAG00000012151	Vars	77	77.896	ENSOANG00000005400	VARS	98	77.660	Ornithorhynchus_anatinus
ENSNGAG00000012151	Vars	100	90.182	ENSOCUG00000022463	VARS	100	90.119	Oryctolagus_cuniculus
ENSNGAG00000012151	Vars	100	64.765	ENSORLG00000013063	vars	100	64.665	Oryzias_latipes
ENSNGAG00000012151	Vars	100	65.298	ENSORLG00020003504	vars	100	65.221	Oryzias_latipes_hni
ENSNGAG00000012151	Vars	100	65.194	ENSORLG00015009001	vars	100	65.194	Oryzias_latipes_hsok
ENSNGAG00000012151	Vars	100	65.116	ENSOMEG00000015016	vars	100	65.116	Oryzias_melastigma
ENSNGAG00000012151	Vars	100	91.693	ENSOGAG00000007515	VARS	100	91.218	Otolemur_garnettii
ENSNGAG00000012151	Vars	100	92.722	ENSPPAG00000034012	VARS	100	92.405	Pan_paniscus
ENSNGAG00000012151	Vars	100	92.722	ENSPPRG00000014855	VARS	100	92.247	Panthera_pardus
ENSNGAG00000012151	Vars	85	93.494	ENSPTIG00000010462	VARS	95	92.857	Panthera_tigris_altaica
ENSNGAG00000012151	Vars	100	92.642	ENSPTRG00000017985	VARS	100	92.326	Pan_troglodytes
ENSNGAG00000012151	Vars	100	90.773	ENSPANG00000014565	VARS	100	90.773	Papio_anubis
ENSNGAG00000012151	Vars	100	64.374	ENSPKIG00000016304	vars	100	64.374	Paramormyrops_kingsleyae
ENSNGAG00000012151	Vars	100	65.721	ENSPMGG00000023909	vars	100	65.563	Periophthalmus_magnuspinnatus
ENSNGAG00000012151	Vars	100	94.304	ENSPEMG00000006639	Vars	100	93.987	Peromyscus_maniculatus_bairdii
ENSNGAG00000012151	Vars	100	84.810	ENSPCIG00000018553	VARS	100	84.810	Phascolarctos_cinereus
ENSNGAG00000012151	Vars	100	65.421	ENSPFOG00000015690	vars	100	65.421	Poecilia_formosa
ENSNGAG00000012151	Vars	100	65.854	ENSPLAG00000009590	vars	100	65.748	Poecilia_latipinna
ENSNGAG00000012151	Vars	100	65.421	ENSPMEG00000004708	vars	100	65.421	Poecilia_mexicana
ENSNGAG00000012151	Vars	100	63.593	ENSPREG00000013264	vars	100	63.593	Poecilia_reticulata
ENSNGAG00000012151	Vars	100	90.744	ENSPPYG00000016460	VARS	100	90.744	Pongo_abelii
ENSNGAG00000012151	Vars	86	91.203	ENSPCAG00000013565	VARS	86	91.203	Procavia_capensis
ENSNGAG00000012151	Vars	100	92.648	ENSPCOG00000010942	VARS	100	92.806	Propithecus_coquereli
ENSNGAG00000012151	Vars	100	89.478	ENSPVAG00000012403	VARS	100	89.003	Pteropus_vampyrus
ENSNGAG00000012151	Vars	100	64.546	ENSPNYG00000022511	vars	100	64.463	Pundamilia_nyererei
ENSNGAG00000012151	Vars	100	65.221	ENSPNAG00000020962	vars	100	65.298	Pygocentrus_nattereri
ENSNGAG00000012151	Vars	100	94.383	ENSRNOG00000000867	Vars	100	94.383	Rattus_norvegicus
ENSNGAG00000012151	Vars	100	92.247	ENSRBIG00000041669	VARS	100	92.247	Rhinopithecus_bieti
ENSNGAG00000012151	Vars	100	92.247	ENSRROG00000045490	VARS	100	92.247	Rhinopithecus_roxellana
ENSNGAG00000012151	Vars	100	92.089	ENSSBOG00000035402	VARS	100	91.772	Saimiri_boliviensis_boliviensis
ENSNGAG00000012151	Vars	100	80.204	ENSSHAG00000006937	VARS	100	80.440	Sarcophilus_harrisii
ENSNGAG00000012151	Vars	100	64.838	ENSSFOG00015014272	vars	100	64.838	Scleropages_formosus
ENSNGAG00000012151	Vars	100	63.848	ENSSMAG00000009596	vars	99	63.587	Scophthalmus_maximus
ENSNGAG00000012151	Vars	100	64.297	ENSSDUG00000014177	vars	100	64.363	Seriola_dumerili
ENSNGAG00000012151	Vars	100	64.219	ENSSLDG00000025316	vars	100	64.286	Seriola_lalandi_dorsalis
ENSNGAG00000012151	Vars	100	65.008	ENSSPAG00000017068	vars	100	65.004	Stegastes_partitus
ENSNGAG00000012151	Vars	100	91.067	ENSSSCG00000038950	VARS	100	91.225	Sus_scrofa
ENSNGAG00000012151	Vars	82	63.801	ENSTRUG00000012307	vars	98	63.576	Takifugu_rubripes
ENSNGAG00000012151	Vars	100	64.890	ENSTNIG00000008011	vars	100	64.627	Tetraodon_nigroviridis
ENSNGAG00000012151	Vars	53	95.506	ENSTBEG00000004728	-	60	95.506	Tupaia_belangeri
ENSNGAG00000012151	Vars	100	84.098	ENSTTRG00000014128	VARS	100	84.098	Tursiops_truncatus
ENSNGAG00000012151	Vars	100	88.758	ENSUAMG00000010424	VARS	100	88.365	Ursus_americanus
ENSNGAG00000012151	Vars	93	92.063	ENSUMAG00000013486	VARS	98	91.111	Ursus_maritimus
ENSNGAG00000012151	Vars	100	91.858	ENSVVUG00000021323	VARS	100	91.383	Vulpes_vulpes
ENSNGAG00000012151	Vars	100	61.232	ENSXETG00000024076	vars	100	60.907	Xenopus_tropicalis
ENSNGAG00000012151	Vars	100	65.248	ENSXCOG00000019172	vars	100	65.248	Xiphophorus_couchianus
ENSNGAG00000012151	Vars	100	65.187	ENSXMAG00000010927	vars	100	65.187	Xiphophorus_maculatus