EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000012203 (Gene tree)
Gene ID: 103746021
Gene Symbol: Tnrc6c
Alias: 9930033H14Rik
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 82822 bases
Position: chrKL203479.1:96524-179345
Accession: 103746021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009554	Ago_hook	PF10427.9	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015069	-	7417	XM_017801946	ENSNGAP00000009554	1899 (aa)	XP_017657435	UPI0004ECFCDE

Gene Model

Click here to download ENSNGAG00000012203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000012203	Tnrc6c	98	34.178	ENSNGAG00000021294	Tnrc6b	96	34.568
ENSNGAG00000012203	Tnrc6c	99	39.872	ENSNGAG00000020702	Tnrc6a	97	39.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012203	Tnrc6c	99	89.172	ENSG00000078687	TNRC6C	100	90.754	Homo_sapiens
ENSNGAG00000012203	Tnrc6c	71	54.048	ENSAPOG00000019749	tnrc6c1	98	49.946	Acanthochromis_polyacanthus
ENSNGAG00000012203	Tnrc6c	93	85.011	ENSAMEG00000013756	TNRC6C	99	85.011	Ailuropoda_melanoleuca
ENSNGAG00000012203	Tnrc6c	90	50.034	ENSACIG00000008075	tnrc6c1	98	51.503	Amphilophus_citrinellus
ENSNGAG00000012203	Tnrc6c	67	68.065	ENSAOCG00000023968	tnrc6c1	99	48.951	Amphiprion_ocellaris
ENSNGAG00000012203	Tnrc6c	71	53.797	ENSAPEG00000009020	tnrc6c1	99	49.208	Amphiprion_percula
ENSNGAG00000012203	Tnrc6c	99	82.110	ENSAPLG00000005456	TNRC6C	100	82.025	Anas_platyrhynchos
ENSNGAG00000012203	Tnrc6c	99	82.362	ENSACAG00000016198	TNRC6C	98	82.804	Anolis_carolinensis
ENSNGAG00000012203	Tnrc6c	99	88.698	ENSANAG00000021554	TNRC6C	100	90.454	Aotus_nancymaae
ENSNGAG00000012203	Tnrc6c	73	50.305	ENSACLG00000000424	tnrc6c1	79	50.677	Astatotilapia_calliptera
ENSNGAG00000012203	Tnrc6c	99	84.787	ENSBTAG00000018658	TNRC6C	100	86.977	Bos_taurus
ENSNGAG00000012203	Tnrc6c	99	88.906	ENSCJAG00000019431	TNRC6C	100	90.454	Callithrix_jacchus
ENSNGAG00000012203	Tnrc6c	99	87.298	ENSCAFG00000005224	TNRC6C	99	87.194	Canis_familiaris
ENSNGAG00000012203	Tnrc6c	99	89.505	ENSCAFG00020006661	TNRC6C	99	89.505	Canis_lupus_dingo
ENSNGAG00000012203	Tnrc6c	99	85.874	ENSCHIG00000026004	TNRC6C	100	85.849	Capra_hircus
ENSNGAG00000012203	Tnrc6c	89	88.972	ENSTSYG00000005403	TNRC6C	100	89.088	Carlito_syrichta
ENSNGAG00000012203	Tnrc6c	98	85.684	ENSCAPG00000007307	TNRC6C	99	85.982	Cavia_aperea
ENSNGAG00000012203	Tnrc6c	99	89.787	ENSCPOG00000000467	TNRC6C	100	90.419	Cavia_porcellus
ENSNGAG00000012203	Tnrc6c	99	89.219	ENSCCAG00000030524	TNRC6C	100	90.866	Cebus_capucinus
ENSNGAG00000012203	Tnrc6c	99	89.062	ENSCATG00000033135	TNRC6C	100	90.689	Cercocebus_atys
ENSNGAG00000012203	Tnrc6c	99	91.552	ENSCLAG00000011139	TNRC6C	99	91.596	Chinchilla_lanigera
ENSNGAG00000012203	Tnrc6c	99	88.698	ENSCSAG00000005167	TNRC6C	99	88.802	Chlorocebus_sabaeus
ENSNGAG00000012203	Tnrc6c	70	88.959	ENSCHOG00000000088	TNRC6C	75	87.898	Choloepus_hoffmanni
ENSNGAG00000012203	Tnrc6c	92	85.982	ENSCPBG00000027960	TNRC6C	100	86.034	Chrysemys_picta_bellii
ENSNGAG00000012203	Tnrc6c	99	88.854	ENSCANG00000041771	TNRC6C	100	90.395	Colobus_angolensis_palliatus
ENSNGAG00000012203	Tnrc6c	99	92.488	ENSCGRG00001022686	Tnrc6c	100	92.130	Cricetulus_griseus_chok1gshd
ENSNGAG00000012203	Tnrc6c	99	92.488	ENSCGRG00000018041	Tnrc6c	100	92.130	Cricetulus_griseus_crigri
ENSNGAG00000012203	Tnrc6c	100	52.324	ENSDARG00000076847	tnrc6c1	99	51.900	Danio_rerio
ENSNGAG00000012203	Tnrc6c	99	84.451	ENSDNOG00000003247	TNRC6C	99	84.659	Dasypus_novemcinctus
ENSNGAG00000012203	Tnrc6c	98	87.026	ENSDORG00000004558	Tnrc6c	100	87.766	Dipodomys_ordii
ENSNGAG00000012203	Tnrc6c	82	81.417	ENSETEG00000005527	TNRC6C	90	81.504	Echinops_telfairi
ENSNGAG00000012203	Tnrc6c	89	89.315	ENSEASG00005004799	TNRC6C	100	89.256	Equus_asinus_asinus
ENSNGAG00000012203	Tnrc6c	99	88.966	ENSECAG00000012486	TNRC6C	99	88.753	Equus_caballus
ENSNGAG00000012203	Tnrc6c	88	88.832	ENSEEUG00000010008	TNRC6C	96	87.817	Erinaceus_europaeus
ENSNGAG00000012203	Tnrc6c	99	85.283	ENSFCAG00000028358	TNRC6C	100	87.471	Felis_catus
ENSNGAG00000012203	Tnrc6c	89	81.921	ENSFALG00000000848	TNRC6C	100	81.864	Ficedula_albicollis
ENSNGAG00000012203	Tnrc6c	92	90.993	ENSFDAG00000010368	TNRC6C	100	91.509	Fukomys_damarensis
ENSNGAG00000012203	Tnrc6c	99	45.236	ENSFHEG00000002936	tnrc6c1	99	47.153	Fundulus_heteroclitus
ENSNGAG00000012203	Tnrc6c	93	84.135	ENSGALG00000001725	TNRC6C	100	85.950	Gallus_gallus
ENSNGAG00000012203	Tnrc6c	99	47.638	ENSGAFG00000019019	tnrc6c1	99	48.652	Gambusia_affinis
ENSNGAG00000012203	Tnrc6c	93	53.243	ENSGACG00000012320	tnrc6c1	97	48.319	Gasterosteus_aculeatus
ENSNGAG00000012203	Tnrc6c	92	85.479	ENSGAGG00000022043	TNRC6C	99	85.513	Gopherus_agassizii
ENSNGAG00000012203	Tnrc6c	99	88.704	ENSGGOG00000011304	TNRC6C	100	90.047	Gorilla_gorilla
ENSNGAG00000012203	Tnrc6c	90	50.444	ENSHBUG00000010846	tnrc6c1	85	50.845	Haplochromis_burtoni
ENSNGAG00000012203	Tnrc6c	99	90.803	ENSHGLG00000004809	TNRC6C	99	90.856	Heterocephalus_glaber_female
ENSNGAG00000012203	Tnrc6c	99	90.909	ENSHGLG00100012597	TNRC6C	99	91.015	Heterocephalus_glaber_male
ENSNGAG00000012203	Tnrc6c	99	52.132	ENSIPUG00000000818	tnrc6c1	98	52.176	Ictalurus_punctatus
ENSNGAG00000012203	Tnrc6c	99	90.653	ENSSTOG00000009101	TNRC6C	100	90.092	Ictidomys_tridecemlineatus
ENSNGAG00000012203	Tnrc6c	99	91.432	ENSJJAG00000017055	Tnrc6c	99	91.325	Jaculus_jaculus
ENSNGAG00000012203	Tnrc6c	99	46.357	ENSKMAG00000021023	tnrc6c1	97	50.297	Kryptolebias_marmoratus
ENSNGAG00000012203	Tnrc6c	92	74.518	ENSLACG00000015283	TNRC6C	100	74.574	Latimeria_chalumnae
ENSNGAG00000012203	Tnrc6c	99	56.533	ENSLOCG00000013377	tnrc6c1	99	56.731	Lepisosteus_oculatus
ENSNGAG00000012203	Tnrc6c	99	89.379	ENSLAFG00000011122	TNRC6C	99	89.255	Loxodonta_africana
ENSNGAG00000012203	Tnrc6c	99	89.092	ENSMFAG00000043943	TNRC6C	100	90.748	Macaca_fascicularis
ENSNGAG00000012203	Tnrc6c	99	88.762	ENSMMUG00000011924	TNRC6C	100	90.748	Macaca_mulatta
ENSNGAG00000012203	Tnrc6c	99	89.115	ENSMNEG00000030405	TNRC6C	100	90.689	Macaca_nemestrina
ENSNGAG00000012203	Tnrc6c	99	89.167	ENSMLEG00000033436	TNRC6C	100	90.748	Mandrillus_leucophaeus
ENSNGAG00000012203	Tnrc6c	95	52.295	ENSMAMG00000023613	tnrc6c1	100	49.221	Mastacembelus_armatus
ENSNGAG00000012203	Tnrc6c	73	50.305	ENSMZEG00005010920	tnrc6c1	79	50.677	Maylandia_zebra
ENSNGAG00000012203	Tnrc6c	99	77.310	ENSMGAG00000003906	TNRC6C	100	77.155	Meleagris_gallopavo
ENSNGAG00000012203	Tnrc6c	89	93.254	ENSMAUG00000021618	Tnrc6c	100	93.254	Mesocricetus_auratus
ENSNGAG00000012203	Tnrc6c	99	89.531	ENSMICG00000003952	TNRC6C	100	91.043	Microcebus_murinus
ENSNGAG00000012203	Tnrc6c	99	94.406	ENSMOCG00000015879	Tnrc6c	100	94.310	Microtus_ochrogaster
ENSNGAG00000012203	Tnrc6c	70	54.454	ENSMMOG00000005203	tnrc6c1	100	49.888	Mola_mola
ENSNGAG00000012203	Tnrc6c	99	84.272	ENSMODG00000001785	TNRC6C	99	84.113	Monodelphis_domestica
ENSNGAG00000012203	Tnrc6c	99	93.926	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	93.736	Mus_caroli
ENSNGAG00000012203	Tnrc6c	99	94.033	ENSMUSG00000025571	Tnrc6c	100	93.908	Mus_musculus
ENSNGAG00000012203	Tnrc6c	99	94.033	MGP_PahariEiJ_G0018593	Tnrc6c	100	93.851	Mus_pahari
ENSNGAG00000012203	Tnrc6c	99	94.086	MGP_SPRETEiJ_G0018309	Tnrc6c	100	93.966	Mus_spretus
ENSNGAG00000012203	Tnrc6c	99	84.659	ENSMPUG00000013348	TNRC6C	98	85.112	Mustela_putorius_furo
ENSNGAG00000012203	Tnrc6c	99	81.776	ENSMLUG00000014431	TNRC6C	98	81.705	Myotis_lucifugus
ENSNGAG00000012203	Tnrc6c	90	51.062	ENSNBRG00000005344	tnrc6c1	80	50.880	Neolamprologus_brichardi
ENSNGAG00000012203	Tnrc6c	98	86.775	ENSNLEG00000000047	TNRC6C	99	86.722	Nomascus_leucogenys
ENSNGAG00000012203	Tnrc6c	89	78.312	ENSMEUG00000005104	TNRC6C	100	78.429	Notamacropus_eugenii
ENSNGAG00000012203	Tnrc6c	89	91.317	ENSODEG00000012499	TNRC6C	100	91.672	Octodon_degus
ENSNGAG00000012203	Tnrc6c	83	50.819	ENSONIG00000002210	tnrc6c1	96	50.068	Oreochromis_niloticus
ENSNGAG00000012203	Tnrc6c	99	61.623	ENSOANG00000009758	-	100	61.559	Ornithorhynchus_anatinus
ENSNGAG00000012203	Tnrc6c	85	78.875	ENSOCUG00000006122	TNRC6C	60	77.033	Oryctolagus_cuniculus
ENSNGAG00000012203	Tnrc6c	93	46.934	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSNGAG00000012203	Tnrc6c	93	45.814	ENSORLG00020016510	tnrc6c1	97	48.681	Oryzias_latipes_hni
ENSNGAG00000012203	Tnrc6c	75	41.971	ENSORLG00015000171	tnrc6c1	97	42.290	Oryzias_latipes_hsok
ENSNGAG00000012203	Tnrc6c	93	47.124	ENSOMEG00000000357	tnrc6c1	99	47.764	Oryzias_melastigma
ENSNGAG00000012203	Tnrc6c	89	87.933	ENSOGAG00000007197	TNRC6C	100	88.048	Otolemur_garnettii
ENSNGAG00000012203	Tnrc6c	95	82.203	ENSOARG00000006041	TNRC6C	97	82.231	Ovis_aries
ENSNGAG00000012203	Tnrc6c	99	89.086	ENSPPAG00000027160	TNRC6C	100	90.631	Pan_paniscus
ENSNGAG00000012203	Tnrc6c	99	85.439	ENSPPRG00000018881	TNRC6C	100	87.647	Panthera_pardus
ENSNGAG00000012203	Tnrc6c	90	76.867	ENSPTIG00000008791	TNRC6C	91	82.632	Panthera_tigris_altaica
ENSNGAG00000012203	Tnrc6c	99	89.167	ENSPTRG00000009699	TNRC6C	100	90.631	Pan_troglodytes
ENSNGAG00000012203	Tnrc6c	99	89.167	ENSPANG00000019994	TNRC6C	100	90.909	Papio_anubis
ENSNGAG00000012203	Tnrc6c	52	61.734	ENSPKIG00000005428	tnrc6c1	98	51.606	Paramormyrops_kingsleyae
ENSNGAG00000012203	Tnrc6c	92	83.915	ENSPSIG00000018069	TNRC6C	100	83.744	Pelodiscus_sinensis
ENSNGAG00000012203	Tnrc6c	58	54.409	ENSPMGG00000022911	tnrc6c1	97	64.372	Periophthalmus_magnuspinnatus
ENSNGAG00000012203	Tnrc6c	99	93.926	ENSPEMG00000009785	Tnrc6c	99	94.086	Peromyscus_maniculatus_bairdii
ENSNGAG00000012203	Tnrc6c	51	82.389	ENSPCIG00000017421	-	99	82.389	Phascolarctos_cinereus
ENSNGAG00000012203	Tnrc6c	96	48.229	ENSPFOG00000012560	tnrc6c1	98	53.782	Poecilia_formosa
ENSNGAG00000012203	Tnrc6c	89	49.062	ENSPLAG00000021055	tnrc6c1	100	49.282	Poecilia_latipinna
ENSNGAG00000012203	Tnrc6c	99	88.814	ENSPPYG00000008679	TNRC6C	98	88.906	Pongo_abelii
ENSNGAG00000012203	Tnrc6c	86	92.180	ENSPCAG00000012510	TNRC6C	90	92.180	Procavia_capensis
ENSNGAG00000012203	Tnrc6c	89	91.397	ENSPCOG00000021451	TNRC6C	100	91.456	Propithecus_coquereli
ENSNGAG00000012203	Tnrc6c	88	88.136	ENSPVAG00000002008	TNRC6C	95	88.136	Pteropus_vampyrus
ENSNGAG00000012203	Tnrc6c	90	49.694	ENSPNYG00000014477	tnrc6c1	85	50.606	Pundamilia_nyererei
ENSNGAG00000012203	Tnrc6c	89	93.144	ENSRNOG00000022395	Tnrc6c	100	93.203	Rattus_norvegicus
ENSNGAG00000012203	Tnrc6c	99	89.086	ENSRBIG00000027777	TNRC6C	100	90.689	Rhinopithecus_bieti
ENSNGAG00000012203	Tnrc6c	99	89.167	ENSRROG00000042912	TNRC6C	100	90.748	Rhinopithecus_roxellana
ENSNGAG00000012203	Tnrc6c	99	88.813	ENSSBOG00000023981	TNRC6C	100	88.286	Saimiri_boliviensis_boliviensis
ENSNGAG00000012203	Tnrc6c	69	58.120	ENSSFOG00015006475	tnrc6c1	99	51.812	Scleropages_formosus
ENSNGAG00000012203	Tnrc6c	61	56.043	ENSSFOG00015004735	-	99	60.105	Scleropages_formosus
ENSNGAG00000012203	Tnrc6c	92	47.202	ENSSMAG00000012761	tnrc6c1	99	50.260	Scophthalmus_maximus
ENSNGAG00000012203	Tnrc6c	93	48.777	ENSSDUG00000002366	tnrc6c1	99	50.000	Seriola_dumerili
ENSNGAG00000012203	Tnrc6c	83	49.205	ENSSLDG00000025613	tnrc6c1	100	49.174	Seriola_lalandi_dorsalis
ENSNGAG00000012203	Tnrc6c	84	90.517	ENSSARG00000006816	TNRC6C	91	90.308	Sorex_araneus
ENSNGAG00000012203	Tnrc6c	79	82.696	ENSSPUG00000007341	TNRC6C	98	82.418	Sphenodon_punctatus
ENSNGAG00000012203	Tnrc6c	70	52.821	ENSSPAG00000014977	tnrc6c1	98	48.207	Stegastes_partitus
ENSNGAG00000012203	Tnrc6c	89	83.766	ENSSSCG00000034373	TNRC6C	100	84.179	Sus_scrofa
ENSNGAG00000012203	Tnrc6c	92	85.812	ENSTGUG00000007733	TNRC6C	100	85.812	Taeniopygia_guttata
ENSNGAG00000012203	Tnrc6c	88	52.701	ENSTRUG00000011685	tnrc6c1	97	48.867	Takifugu_rubripes
ENSNGAG00000012203	Tnrc6c	91	54.298	ENSTNIG00000005273	tnrc6c1	100	58.949	Tetraodon_nigroviridis
ENSNGAG00000012203	Tnrc6c	57	89.062	ENSTBEG00000005046	TNRC6C	100	80.262	Tupaia_belangeri
ENSNGAG00000012203	Tnrc6c	92	88.558	ENSTTRG00000010828	TNRC6C	99	88.558	Tursiops_truncatus
ENSNGAG00000012203	Tnrc6c	99	87.328	ENSUMAG00000013614	TNRC6C	99	87.447	Ursus_maritimus
ENSNGAG00000012203	Tnrc6c	89	89.794	ENSVVUG00000015268	TNRC6C	100	89.794	Vulpes_vulpes
ENSNGAG00000012203	Tnrc6c	89	73.949	ENSXETG00000019470	tnrc6c	100	74.195	Xenopus_tropicalis
ENSNGAG00000012203	Tnrc6c	99	47.363	ENSXMAG00000025971	tnrc6c1	99	50.237	Xiphophorus_maculatus