EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000012225 (Gene tree)
Gene ID: 103745906
Gene Symbol: Srsf4
Alias: 5730499P16Rik|MNCb-2616|SRp75|Sfrs4
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 28032 bases
Position: chrKL203446.1:829747-857778
Accession: 103745906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009577	RRM_1	PF00076.22	2.3e-31	1	2
ENSNGAP00000009577	RRM_1	PF00076.22	2.3e-31	2	2
ENSNGAP00000009582	RRM_1	PF00076.22	2.4e-31	1	2
ENSNGAP00000009582	RRM_1	PF00076.22	2.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015097	-	1443	-	ENSNGAP00000009582	480 (aa)	-	-
ENSNGAT00000015092	-	2181	XM_008847926	ENSNGAP00000009577	477 (aa)	XP_008846148	UPI0004ED6B4F

Gene Model

Click here to download ENSNGAG00000012225's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG
ngi05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012225	Srsf4	92	85.526	ENSG00000116350	SRSF4	92	86.184	Homo_sapiens
ENSNGAG00000012225	Srsf4	92	83.117	ENSAMEG00000000594	SRSF4	92	83.983	Ailuropoda_melanoleuca
ENSNGAG00000012225	Srsf4	84	64.988	ENSAPLG00000006595	-	91	69.565	Anas_platyrhynchos
ENSNGAG00000012225	Srsf4	87	84.856	ENSANAG00000037134	SRSF4	100	85.612	Aotus_nancymaae
ENSNGAG00000012225	Srsf4	92	83.077	ENSBTAG00000013309	SRSF4	92	88.352	Bos_taurus
ENSNGAG00000012225	Srsf4	92	83.766	ENSCJAG00000047192	SRSF4	92	84.199	Callithrix_jacchus
ENSNGAG00000012225	Srsf4	85	82.201	ENSCAFG00000011669	SRSF4	90	79.582	Canis_familiaris
ENSNGAG00000012225	Srsf4	85	83.294	ENSCAFG00020023963	SRSF4	88	80.706	Canis_lupus_dingo
ENSNGAG00000012225	Srsf4	92	100.000	ENSCHIG00000022096	SRSF4	93	79.503	Capra_hircus
ENSNGAG00000012225	Srsf4	92	84.464	ENSTSYG00000007903	SRSF4	92	84.498	Carlito_syrichta
ENSNGAG00000012225	Srsf4	92	73.420	ENSCAPG00000014747	SRSF4	91	72.648	Cavia_aperea
ENSNGAG00000012225	Srsf4	93	77.682	ENSCPOG00000036234	SRSF4	92	78.017	Cavia_porcellus
ENSNGAG00000012225	Srsf4	66	78.171	ENSCCAG00000033585	SRSF4	90	79.056	Cebus_capucinus
ENSNGAG00000012225	Srsf4	92	85.307	ENSCATG00000031440	SRSF4	92	85.526	Cercocebus_atys
ENSNGAG00000012225	Srsf4	93	82.112	ENSCLAG00000009008	SRSF4	92	82.251	Chinchilla_lanigera
ENSNGAG00000012225	Srsf4	92	85.746	ENSCSAG00000001022	SRSF4	92	86.404	Chlorocebus_sabaeus
ENSNGAG00000012225	Srsf4	85	77.251	ENSCHOG00000013858	SRSF4	92	73.381	Choloepus_hoffmanni
ENSNGAG00000012225	Srsf4	70	83.824	ENSCPBG00000009020	SRSF4	92	77.802	Chrysemys_picta_bellii
ENSNGAG00000012225	Srsf4	67	47.507	ENSCING00000024718	-	56	60.417	Ciona_intestinalis
ENSNGAG00000012225	Srsf4	92	85.746	ENSCANG00000028667	SRSF4	92	86.404	Colobus_angolensis_palliatus
ENSNGAG00000012225	Srsf4	93	82.965	ENSCGRG00001021115	Srsf4	92	85.398	Cricetulus_griseus_chok1gshd
ENSNGAG00000012225	Srsf4	85	78.520	ENSCGRG00000014137	Srsf4	91	82.185	Cricetulus_griseus_crigri
ENSNGAG00000012225	Srsf4	68	92.355	ENSDNOG00000047961	SRSF4	92	78.085	Dasypus_novemcinctus
ENSNGAG00000012225	Srsf4	92	75.693	ENSDORG00000002459	Srsf4	92	75.906	Dipodomys_ordii
ENSNGAG00000012225	Srsf4	53	57.519	FBgn0004587	B52	96	62.308	Drosophila_melanogaster
ENSNGAG00000012225	Srsf4	92	85.560	ENSEASG00005010168	SRSF4	92	86.422	Equus_asinus_asinus
ENSNGAG00000012225	Srsf4	92	85.560	ENSECAG00000021350	SRSF4	92	86.422	Equus_caballus
ENSNGAG00000012225	Srsf4	92	84.701	ENSEEUG00000008479	SRSF4	92	86.031	Erinaceus_europaeus
ENSNGAG00000012225	Srsf4	54	56.146	ENSELUG00000017551	srsf4	93	72.308	Esox_lucius
ENSNGAG00000012225	Srsf4	92	86.123	ENSFCAG00000027821	SRSF4	92	86.784	Felis_catus
ENSNGAG00000012225	Srsf4	88	69.213	ENSFALG00000001346	SRSF4	63	84.314	Ficedula_albicollis
ENSNGAG00000012225	Srsf4	88	78.182	ENSFDAG00000007332	SRSF4	92	79.108	Fukomys_damarensis
ENSNGAG00000012225	Srsf4	92	70.067	ENSGALG00000050314	SRSF4	92	70.199	Gallus_gallus
ENSNGAG00000012225	Srsf4	52	85.507	ENSGAFG00000018496	srsf4	65	76.796	Gambusia_affinis
ENSNGAG00000012225	Srsf4	67	85.231	ENSGAGG00000014836	SRSF4	92	74.187	Gopherus_agassizii
ENSNGAG00000012225	Srsf4	92	85.746	ENSGGOG00000002444	SRSF4	92	86.404	Gorilla_gorilla
ENSNGAG00000012225	Srsf4	61	88.095	ENSHGLG00000011842	SRSF4	92	82.379	Heterocephalus_glaber_female
ENSNGAG00000012225	Srsf4	61	88.095	ENSHGLG00100017279	SRSF4	92	82.379	Heterocephalus_glaber_male
ENSNGAG00000012225	Srsf4	57	89.394	ENSHCOG00000012540	srsf4	68	82.162	Hippocampus_comes
ENSNGAG00000012225	Srsf4	92	88.095	ENSSTOG00000015908	SRSF4	92	87.446	Ictidomys_tridecemlineatus
ENSNGAG00000012225	Srsf4	63	77.632	ENSJJAG00000022153	Srsf4	92	76.008	Jaculus_jaculus
ENSNGAG00000012225	Srsf4	81	99.435	ENSLAFG00000002575	SRSF4	91	78.360	Loxodonta_africana
ENSNGAG00000012225	Srsf4	92	85.746	ENSMFAG00000041784	SRSF4	92	86.404	Macaca_fascicularis
ENSNGAG00000012225	Srsf4	85	84.524	ENSMMUG00000007110	SRSF4	87	85.238	Macaca_mulatta
ENSNGAG00000012225	Srsf4	92	85.746	ENSMNEG00000034931	SRSF4	92	86.404	Macaca_nemestrina
ENSNGAG00000012225	Srsf4	92	85.526	ENSMLEG00000031619	SRSF4	92	85.746	Mandrillus_leucophaeus
ENSNGAG00000012225	Srsf4	92	69.845	ENSMGAG00000002400	SRSF4	92	69.978	Meleagris_gallopavo
ENSNGAG00000012225	Srsf4	93	87.364	ENSMAUG00000021940	Srsf4	92	84.615	Mesocricetus_auratus
ENSNGAG00000012225	Srsf4	92	81.996	ENSMICG00000043567	SRSF4	92	86.117	Microcebus_murinus
ENSNGAG00000012225	Srsf4	68	93.393	ENSMOCG00000013319	Srsf4	92	83.807	Microtus_ochrogaster
ENSNGAG00000012225	Srsf4	69	59.337	ENSMMOG00000013653	srsf4	65	80.337	Mola_mola
ENSNGAG00000012225	Srsf4	64	91.803	ENSMODG00000011052	SRSF4	94	91.803	Monodelphis_domestica
ENSNGAG00000012225	Srsf4	93	83.696	MGP_CAROLIEiJ_G0026555	Srsf4	92	84.211	Mus_caroli
ENSNGAG00000012225	Srsf4	93	83.913	ENSMUSG00000028911	Srsf4	92	84.430	Mus_musculus
ENSNGAG00000012225	Srsf4	63	96.066	MGP_PahariEiJ_G0028887	Srsf4	92	85.242	Mus_pahari
ENSNGAG00000012225	Srsf4	93	84.783	MGP_SPRETEiJ_G0027535	Srsf4	92	84.211	Mus_spretus
ENSNGAG00000012225	Srsf4	68	92.661	ENSMPUG00000015470	SRSF4	92	82.151	Mustela_putorius_furo
ENSNGAG00000012225	Srsf4	67	88.438	ENSMLUG00000014770	SRSF4	79	100.000	Myotis_lucifugus
ENSNGAG00000012225	Srsf4	92	85.965	ENSNLEG00000009916	SRSF4	92	86.623	Nomascus_leucogenys
ENSNGAG00000012225	Srsf4	60	100.000	ENSMEUG00000003045	-	68	100.000	Notamacropus_eugenii
ENSNGAG00000012225	Srsf4	92	81.057	ENSOPRG00000010098	SRSF4	93	81.278	Ochotona_princeps
ENSNGAG00000012225	Srsf4	68	86.585	ENSODEG00000003230	SRSF4	92	81.075	Octodon_degus
ENSNGAG00000012225	Srsf4	68	88.520	ENSOCUG00000001837	SRSF4	93	80.911	Oryctolagus_cuniculus
ENSNGAG00000012225	Srsf4	92	85.934	ENSOGAG00000015515	SRSF4	92	86.154	Otolemur_garnettii
ENSNGAG00000012225	Srsf4	92	85.746	ENSPPAG00000028357	SRSF4	92	86.404	Pan_paniscus
ENSNGAG00000012225	Srsf4	92	86.123	ENSPPRG00000016248	SRSF4	92	86.784	Panthera_pardus
ENSNGAG00000012225	Srsf4	92	85.746	ENSPTRG00000000445	SRSF4	92	86.404	Pan_troglodytes
ENSNGAG00000012225	Srsf4	92	85.526	ENSPANG00000021937	SRSF4	92	85.746	Papio_anubis
ENSNGAG00000012225	Srsf4	63	89.803	ENSPEMG00000003365	Srsf4	91	80.998	Peromyscus_maniculatus_bairdii
ENSNGAG00000012225	Srsf4	64	62.500	ENSPMEG00000023638	srsf4	70	86.957	Poecilia_mexicana
ENSNGAG00000012225	Srsf4	92	85.307	ENSPPYG00000001629	SRSF4	92	85.965	Pongo_abelii
ENSNGAG00000012225	Srsf4	92	82.932	ENSPCAG00000009879	SRSF4	92	83.370	Procavia_capensis
ENSNGAG00000012225	Srsf4	92	82.637	ENSPCOG00000027341	SRSF4	92	87.033	Propithecus_coquereli
ENSNGAG00000012225	Srsf4	66	73.554	ENSPVAG00000012500	SRSF4	78	73.554	Pteropus_vampyrus
ENSNGAG00000012225	Srsf4	54	69.231	ENSPNYG00000003796	srsf4	56	85.714	Pundamilia_nyererei
ENSNGAG00000012225	Srsf4	63	96.026	ENSRNOG00000010007	Srsf4	92	86.123	Rattus_norvegicus
ENSNGAG00000012225	Srsf4	92	85.746	ENSRBIG00000035789	SRSF4	92	86.404	Rhinopithecus_bieti
ENSNGAG00000012225	Srsf4	92	85.746	ENSRROG00000029463	SRSF4	92	86.404	Rhinopithecus_roxellana
ENSNGAG00000012225	Srsf4	92	83.983	ENSSBOG00000027098	SRSF4	92	84.416	Saimiri_boliviensis_boliviensis
ENSNGAG00000012225	Srsf4	58	88.929	ENSSHAG00000012407	SRSF4	99	88.276	Sarcophilus_harrisii
ENSNGAG00000012225	Srsf4	50	72.996	ENSSDUG00000007387	srsf4	54	87.640	Seriola_dumerili
ENSNGAG00000012225	Srsf4	50	74.689	ENSSARG00000001277	SRSF4	52	72.574	Sorex_araneus
ENSNGAG00000012225	Srsf4	71	80.409	ENSSPUG00000015318	-	91	76.940	Sphenodon_punctatus
ENSNGAG00000012225	Srsf4	68	91.104	ENSSSCG00000003589	SRSF4	96	85.043	Sus_scrofa
ENSNGAG00000012225	Srsf4	84	68.558	ENSTGUG00000000765	SRSF4	60	82.222	Taeniopygia_guttata
ENSNGAG00000012225	Srsf4	67	92.901	ENSTTRG00000002572	SRSF4	92	84.430	Tursiops_truncatus
ENSNGAG00000012225	Srsf4	92	81.197	ENSUAMG00000006106	SRSF4	92	82.391	Ursus_americanus
ENSNGAG00000012225	Srsf4	85	83.529	ENSVVUG00000012690	SRSF4	90	80.420	Vulpes_vulpes