EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000012332 (Gene tree)
Gene ID: 103751340
Gene Symbol: Scaf8
Alias: A630086M08Rik|A930036P18Rik|Rbm16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 99719 bases
Position: chrKL204747.1:182507-282225
Accession: 103751340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009744	RRM_1	PF00076.22	8.5e-10	1	1
ENSNGAP00000009740	RRM_1	PF00076.22	8.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015256	-	4871	XM_008854721	ENSNGAP00000009740	1269 (aa)	XP_008852943	UPI0004ED19DA
ENSNGAT00000015260	-	3798	-	ENSNGAP00000009744	1265 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000012332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012332	Scaf8	100	93.160	ENSG00000213079	SCAF8	100	93.160	Homo_sapiens
ENSNGAG00000012332	Scaf8	89	68.075	ENSAPOG00000015527	SCAF8	77	67.723	Acanthochromis_polyacanthus
ENSNGAG00000012332	Scaf8	100	91.176	ENSAMEG00000007583	SCAF8	97	91.176	Ailuropoda_melanoleuca
ENSNGAG00000012332	Scaf8	89	68.075	ENSAOCG00000002421	SCAF8	76	67.723	Amphiprion_ocellaris
ENSNGAG00000012332	Scaf8	90	65.335	ENSATEG00000006959	SCAF8	97	54.971	Anabas_testudineus
ENSNGAG00000012332	Scaf8	100	77.414	ENSAPLG00000005765	SCAF8	100	77.259	Anas_platyrhynchos
ENSNGAG00000012332	Scaf8	99	73.684	ENSACAG00000005282	SCAF8	99	73.606	Anolis_carolinensis
ENSNGAG00000012332	Scaf8	100	93.082	ENSANAG00000036184	SCAF8	100	93.082	Aotus_nancymaae
ENSNGAG00000012332	Scaf8	87	69.353	ENSACLG00000018828	SCAF8	80	68.949	Astatotilapia_calliptera
ENSNGAG00000012332	Scaf8	100	91.969	ENSBTAG00000031917	SCAF8	100	91.969	Bos_taurus
ENSNGAG00000012332	Scaf8	100	92.846	ENSCJAG00000012631	SCAF8	97	91.338	Callithrix_jacchus
ENSNGAG00000012332	Scaf8	99	92.801	ENSCAFG00000000570	SCAF8	99	92.801	Canis_familiaris
ENSNGAG00000012332	Scaf8	99	92.795	ENSCAFG00020015048	SCAF8	99	92.739	Canis_lupus_dingo
ENSNGAG00000012332	Scaf8	100	91.811	ENSCHIG00000025041	SCAF8	100	91.811	Capra_hircus
ENSNGAG00000012332	Scaf8	99	92.642	ENSTSYG00000010991	SCAF8	97	92.642	Carlito_syrichta
ENSNGAG00000012332	Scaf8	65	98.276	ENSCAPG00000003300	SCAF8	85	98.246	Cavia_aperea
ENSNGAG00000012332	Scaf8	99	85.285	ENSCPOG00000022216	-	99	84.494	Cavia_porcellus
ENSNGAG00000012332	Scaf8	100	93.003	ENSCCAG00000024952	SCAF8	100	93.003	Cebus_capucinus
ENSNGAG00000012332	Scaf8	100	93.318	ENSCATG00000035361	SCAF8	100	93.318	Cercocebus_atys
ENSNGAG00000012332	Scaf8	100	92.356	ENSCLAG00000004910	SCAF8	100	92.851	Chinchilla_lanigera
ENSNGAG00000012332	Scaf8	100	91.957	ENSCSAG00000013430	SCAF8	100	91.957	Chlorocebus_sabaeus
ENSNGAG00000012332	Scaf8	100	74.284	ENSCPBG00000016330	SCAF8	100	73.622	Chrysemys_picta_bellii
ENSNGAG00000012332	Scaf8	100	93.239	ENSCANG00000039499	SCAF8	99	93.185	Colobus_angolensis_palliatus
ENSNGAG00000012332	Scaf8	100	93.459	ENSCGRG00001020167	Scaf8	100	93.459	Cricetulus_griseus_chok1gshd
ENSNGAG00000012332	Scaf8	99	93.333	ENSCGRG00000004120	Scaf8	99	93.333	Cricetulus_griseus_crigri
ENSNGAG00000012332	Scaf8	89	64.547	ENSCSEG00000000043	-	78	65.724	Cynoglossus_semilaevis
ENSNGAG00000012332	Scaf8	83	66.279	ENSCVAG00000000925	SCAF8	55	66.060	Cyprinodon_variegatus
ENSNGAG00000012332	Scaf8	96	87.613	ENSDNOG00000025271	SCAF8	100	89.910	Dasypus_novemcinctus
ENSNGAG00000012332	Scaf8	99	92.192	ENSDORG00000006391	Scaf8	100	92.271	Dipodomys_ordii
ENSNGAG00000012332	Scaf8	100	93.082	ENSEASG00005018879	SCAF8	100	93.082	Equus_asinus_asinus
ENSNGAG00000012332	Scaf8	100	93.234	ENSECAG00000005540	SCAF8	100	93.234	Equus_caballus
ENSNGAG00000012332	Scaf8	60	70.221	ENSELUG00000002779	SCAF8	51	69.571	Esox_lucius
ENSNGAG00000012332	Scaf8	100	93.391	ENSFCAG00000023424	SCAF8	100	93.391	Felis_catus
ENSNGAG00000012332	Scaf8	100	76.732	ENSFALG00000012433	SCAF8	100	76.905	Ficedula_albicollis
ENSNGAG00000012332	Scaf8	100	92.290	ENSFDAG00000010335	SCAF8	99	92.642	Fukomys_damarensis
ENSNGAG00000012332	Scaf8	89	71.597	ENSFHEG00000008284	SCAF8	77	71.335	Fundulus_heteroclitus
ENSNGAG00000012332	Scaf8	80	57.407	ENSGMOG00000018812	SCAF8	83	59.140	Gadus_morhua
ENSNGAG00000012332	Scaf8	99	77.743	ENSGALG00000013635	SCAF8	99	77.354	Gallus_gallus
ENSNGAG00000012332	Scaf8	86	67.201	ENSGAFG00000018033	SCAF8	78	65.153	Gambusia_affinis
ENSNGAG00000012332	Scaf8	83	68.635	ENSGACG00000006909	SCAF8	94	70.079	Gasterosteus_aculeatus
ENSNGAG00000012332	Scaf8	63	70.567	ENSGAGG00000017820	-	88	70.567	Gopherus_agassizii
ENSNGAG00000012332	Scaf8	100	93.082	ENSGGOG00000008645	SCAF8	100	93.082	Gorilla_gorilla
ENSNGAG00000012332	Scaf8	87	69.231	ENSHBUG00000019537	SCAF8	80	68.826	Haplochromis_burtoni
ENSNGAG00000012332	Scaf8	100	92.526	ENSHGLG00000003619	SCAF8	100	92.526	Heterocephalus_glaber_female
ENSNGAG00000012332	Scaf8	100	91.896	ENSHGLG00100004708	SCAF8	100	92.466	Heterocephalus_glaber_male
ENSNGAG00000012332	Scaf8	99	93.829	ENSSTOG00000026043	SCAF8	99	93.829	Ictidomys_tridecemlineatus
ENSNGAG00000012332	Scaf8	100	92.598	ENSJJAG00000020480	Scaf8	100	92.598	Jaculus_jaculus
ENSNGAG00000012332	Scaf8	89	67.609	ENSKMAG00000012767	SCAF8	78	67.258	Kryptolebias_marmoratus
ENSNGAG00000012332	Scaf8	62	75.185	ENSLBEG00000012484	-	63	75.357	Labrus_bergylta
ENSNGAG00000012332	Scaf8	84	78.913	ENSLACG00000001394	SCAF8	99	63.814	Latimeria_chalumnae
ENSNGAG00000012332	Scaf8	100	61.388	ENSLOCG00000016856	SCAF8	100	60.764	Lepisosteus_oculatus
ENSNGAG00000012332	Scaf8	100	90.659	ENSLAFG00000000022	SCAF8	100	91.209	Loxodonta_africana
ENSNGAG00000012332	Scaf8	100	93.475	ENSMFAG00000032738	SCAF8	100	93.475	Macaca_fascicularis
ENSNGAG00000012332	Scaf8	100	93.475	ENSMMUG00000015163	SCAF8	100	93.475	Macaca_mulatta
ENSNGAG00000012332	Scaf8	100	93.475	ENSMNEG00000043466	SCAF8	100	93.475	Macaca_nemestrina
ENSNGAG00000012332	Scaf8	99	93.423	ENSMLEG00000034845	SCAF8	99	93.423	Mandrillus_leucophaeus
ENSNGAG00000012332	Scaf8	85	64.384	ENSMAMG00000009457	SCAF8	76	63.705	Mastacembelus_armatus
ENSNGAG00000012332	Scaf8	87	69.231	ENSMZEG00005005698	SCAF8	80	68.826	Maylandia_zebra
ENSNGAG00000012332	Scaf8	99	76.828	ENSMGAG00000012762	SCAF8	100	77.467	Meleagris_gallopavo
ENSNGAG00000012332	Scaf8	99	92.851	ENSMAUG00000009513	Scaf8	100	92.851	Mesocricetus_auratus
ENSNGAG00000012332	Scaf8	100	92.616	ENSMICG00000028965	SCAF8	100	92.459	Microcebus_murinus
ENSNGAG00000012332	Scaf8	100	93.775	ENSMOCG00000014950	Scaf8	100	93.775	Microtus_ochrogaster
ENSNGAG00000012332	Scaf8	81	68.059	ENSMMOG00000002216	SCAF8	75	67.480	Mola_mola
ENSNGAG00000012332	Scaf8	99	85.217	ENSMODG00000008301	SCAF8	99	85.217	Monodelphis_domestica
ENSNGAG00000012332	Scaf8	89	67.254	ENSMALG00000011584	SCAF8	78	68.453	Monopterus_albus
ENSNGAG00000012332	Scaf8	100	92.987	MGP_CAROLIEiJ_G0021016	Scaf8	100	92.987	Mus_caroli
ENSNGAG00000012332	Scaf8	100	93.223	ENSMUSG00000046201	Scaf8	100	93.223	Mus_musculus
ENSNGAG00000012332	Scaf8	100	93.775	MGP_PahariEiJ_G0023334	Scaf8	100	93.775	Mus_pahari
ENSNGAG00000012332	Scaf8	100	91.022	ENSMPUG00000001974	SCAF8	100	91.022	Mustela_putorius_furo
ENSNGAG00000012332	Scaf8	100	90.952	ENSMLUG00000029190	SCAF8	100	90.952	Myotis_lucifugus
ENSNGAG00000012332	Scaf8	100	52.746	ENSNBRG00000009067	SCAF8	100	52.241	Neolamprologus_brichardi
ENSNGAG00000012332	Scaf8	100	91.765	ENSNLEG00000015509	SCAF8	99	91.438	Nomascus_leucogenys
ENSNGAG00000012332	Scaf8	70	92.857	ENSOPRG00000018413	-	76	93.939	Ochotona_princeps
ENSNGAG00000012332	Scaf8	100	92.531	ENSODEG00000007296	SCAF8	100	92.531	Octodon_degus
ENSNGAG00000012332	Scaf8	100	55.383	ENSONIG00000008119	SCAF8	99	54.412	Oreochromis_niloticus
ENSNGAG00000012332	Scaf8	99	93.592	ENSOCUG00000026063	SCAF8	99	93.592	Oryctolagus_cuniculus
ENSNGAG00000012332	Scaf8	93	56.353	ENSORLG00000017358	SCAF8	78	68.010	Oryzias_latipes
ENSNGAG00000012332	Scaf8	93	56.518	ENSORLG00020002214	SCAF8	78	68.215	Oryzias_latipes_hni
ENSNGAG00000012332	Scaf8	93	56.400	ENSORLG00015015779	SCAF8	57	68.337	Oryzias_latipes_hsok
ENSNGAG00000012332	Scaf8	93	56.705	ENSOMEG00000015471	SCAF8	80	68.376	Oryzias_melastigma
ENSNGAG00000012332	Scaf8	100	91.029	ENSOGAG00000034223	SCAF8	97	91.029	Otolemur_garnettii
ENSNGAG00000012332	Scaf8	99	91.594	ENSOARG00000004159	SCAF8	100	91.594	Ovis_aries
ENSNGAG00000012332	Scaf8	100	93.003	ENSPPAG00000039826	SCAF8	100	93.003	Pan_paniscus
ENSNGAG00000012332	Scaf8	100	93.234	ENSPPRG00000023175	SCAF8	100	93.234	Panthera_pardus
ENSNGAG00000012332	Scaf8	99	93.112	ENSPTIG00000014836	SCAF8	100	93.112	Panthera_tigris_altaica
ENSNGAG00000012332	Scaf8	100	93.160	ENSPTRG00000018727	SCAF8	100	93.160	Pan_troglodytes
ENSNGAG00000012332	Scaf8	100	93.318	ENSPANG00000017489	SCAF8	100	91.352	Papio_anubis
ENSNGAG00000012332	Scaf8	100	56.939	ENSPKIG00000021212	SCAF8	100	56.627	Paramormyrops_kingsleyae
ENSNGAG00000012332	Scaf8	89	69.762	ENSPSIG00000008614	SCAF8	99	74.300	Pelodiscus_sinensis
ENSNGAG00000012332	Scaf8	99	93.566	ENSPEMG00000010531	Scaf8	100	93.566	Peromyscus_maniculatus_bairdii
ENSNGAG00000012332	Scaf8	100	85.625	ENSPCIG00000001141	SCAF8	100	85.625	Phascolarctos_cinereus
ENSNGAG00000012332	Scaf8	86	69.250	ENSPFOG00000004176	SCAF8	100	54.992	Poecilia_formosa
ENSNGAG00000012332	Scaf8	86	69.004	ENSPLAG00000021432	SCAF8	77	68.512	Poecilia_latipinna
ENSNGAG00000012332	Scaf8	86	69.250	ENSPMEG00000007591	SCAF8	84	68.082	Poecilia_mexicana
ENSNGAG00000012332	Scaf8	86	68.881	ENSPREG00000000652	SCAF8	77	68.389	Poecilia_reticulata
ENSNGAG00000012332	Scaf8	100	91.837	ENSPPYG00000017121	SCAF8	100	91.523	Pongo_abelii
ENSNGAG00000012332	Scaf8	85	95.812	ENSPCAG00000013044	SCAF8	90	95.812	Procavia_capensis
ENSNGAG00000012332	Scaf8	100	93.009	ENSPCOG00000002067	SCAF8	99	92.795	Propithecus_coquereli
ENSNGAG00000012332	Scaf8	98	90.168	ENSPVAG00000005582	SCAF8	100	91.287	Pteropus_vampyrus
ENSNGAG00000012332	Scaf8	87	69.353	ENSPNYG00000007277	SCAF8	80	68.949	Pundamilia_nyererei
ENSNGAG00000012332	Scaf8	87	67.956	ENSPNAG00000024740	SCAF8	82	68.523	Pygocentrus_nattereri
ENSNGAG00000012332	Scaf8	100	93.065	ENSRNOG00000016919	Scaf8	100	93.065	Rattus_norvegicus
ENSNGAG00000012332	Scaf8	100	93.239	ENSRBIG00000035769	SCAF8	100	93.239	Rhinopithecus_bieti
ENSNGAG00000012332	Scaf8	100	93.160	ENSRROG00000013580	SCAF8	100	93.160	Rhinopithecus_roxellana
ENSNGAG00000012332	Scaf8	100	92.925	ENSSBOG00000027023	SCAF8	100	92.925	Saimiri_boliviensis_boliviensis
ENSNGAG00000012332	Scaf8	100	85.322	ENSSHAG00000009915	SCAF8	100	85.322	Sarcophilus_harrisii
ENSNGAG00000012332	Scaf8	100	54.784	ENSSFOG00015009481	SCAF8	93	68.421	Scleropages_formosus
ENSNGAG00000012332	Scaf8	88	67.098	ENSSMAG00000008275	SCAF8	77	66.510	Scophthalmus_maximus
ENSNGAG00000012332	Scaf8	100	76.395	ENSSPUG00000015219	SCAF8	100	76.395	Sphenodon_punctatus
ENSNGAG00000012332	Scaf8	100	92.211	ENSSSCG00000004070	SCAF8	100	92.211	Sus_scrofa
ENSNGAG00000012332	Scaf8	99	78.397	ENSTGUG00000011151	SCAF8	100	78.633	Taeniopygia_guttata
ENSNGAG00000012332	Scaf8	82	71.111	ENSTRUG00000009243	SCAF8	75	70.850	Takifugu_rubripes
ENSNGAG00000012332	Scaf8	93	63.879	ENSTNIG00000016885	SCAF8	99	69.752	Tetraodon_nigroviridis
ENSNGAG00000012332	Scaf8	99	91.356	ENSTTRG00000014538	SCAF8	100	91.356	Tursiops_truncatus
ENSNGAG00000012332	Scaf8	100	92.604	ENSUAMG00000024736	SCAF8	99	92.546	Ursus_americanus
ENSNGAG00000012332	Scaf8	98	92.536	ENSUMAG00000013404	SCAF8	100	92.536	Ursus_maritimus
ENSNGAG00000012332	Scaf8	67	84.831	ENSVPAG00000012465	SCAF8	99	83.958	Vicugna_pacos
ENSNGAG00000012332	Scaf8	99	92.874	ENSVVUG00000007532	SCAF8	100	92.857	Vulpes_vulpes
ENSNGAG00000012332	Scaf8	100	60.792	ENSXETG00000013132	scaf8	100	60.886	Xenopus_tropicalis
ENSNGAG00000012332	Scaf8	86	68.881	ENSXMAG00000019192	SCAF8	78	68.512	Xiphophorus_maculatus