EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000012455 (Gene tree)
Gene ID: 103739154
Gene Symbol: Gpatch1
Alias: 1300003A17Rik|Gpatc1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 65582 bases
Position: chrKL201859.1:1641775-1707356
Accession: 103739154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009904	DUF1604	PF07713.13	5.4e-36	1	1
ENSNGAP00000009895	DUF1604	PF07713.13	5.4e-36	1	1
ENSNGAP00000009904	G-patch	PF01585.23	4.7e-07	1	1
ENSNGAP00000009895	G-patch	PF01585.23	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015413	-	3036	XM_008839459	ENSNGAP00000009895	930 (aa)	XP_008837681	UPI0004ED1F48
ENSNGAT00000015422	-	2760	-	ENSNGAP00000009904	919 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000012455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012455's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012455	Gpatch1	100	84.120	ENSG00000076650	GPATCH1	100	84.120	Homo_sapiens
ENSNGAG00000012455	Gpatch1	100	84.442	ENSAMEG00000015575	GPATCH1	100	84.442	Ailuropoda_melanoleuca
ENSNGAG00000012455	Gpatch1	81	70.166	ENSAOCG00000006668	gpatch1	75	70.166	Amphiprion_ocellaris
ENSNGAG00000012455	Gpatch1	82	53.393	ENSAPEG00000000026	gpatch1	91	51.543	Amphiprion_percula
ENSNGAG00000012455	Gpatch1	90	50.741	ENSATEG00000014494	gpatch1	90	51.200	Anabas_testudineus
ENSNGAG00000012455	Gpatch1	91	58.929	ENSAPLG00000007584	GPATCH1	96	60.669	Anas_platyrhynchos
ENSNGAG00000012455	Gpatch1	100	84.979	ENSANAG00000027002	GPATCH1	100	84.979	Aotus_nancymaae
ENSNGAG00000012455	Gpatch1	82	53.699	ENSACLG00000024740	gpatch1	79	53.512	Astatotilapia_calliptera
ENSNGAG00000012455	Gpatch1	91	51.363	ENSAMXG00000020177	gpatch1	97	51.728	Astyanax_mexicanus
ENSNGAG00000012455	Gpatch1	91	84.217	ENSBTAG00000000721	GPATCH1	100	83.136	Bos_taurus
ENSNGAG00000012455	Gpatch1	100	84.335	ENSCJAG00000000684	GPATCH1	100	84.335	Callithrix_jacchus
ENSNGAG00000012455	Gpatch1	100	84.030	ENSCAFG00000007457	GPATCH1	84	84.030	Canis_familiaris
ENSNGAG00000012455	Gpatch1	94	85.126	ENSCAFG00020019731	GPATCH1	91	85.211	Canis_lupus_dingo
ENSNGAG00000012455	Gpatch1	99	83.731	ENSCHIG00000019626	GPATCH1	100	83.566	Capra_hircus
ENSNGAG00000012455	Gpatch1	97	76.249	ENSCAPG00000008827	GPATCH1	100	78.084	Cavia_aperea
ENSNGAG00000012455	Gpatch1	100	78.503	ENSCPOG00000024477	GPATCH1	100	80.963	Cavia_porcellus
ENSNGAG00000012455	Gpatch1	100	84.227	ENSCCAG00000024676	GPATCH1	100	84.227	Cebus_capucinus
ENSNGAG00000012455	Gpatch1	100	84.764	ENSCATG00000043637	GPATCH1	100	84.764	Cercocebus_atys
ENSNGAG00000012455	Gpatch1	96	80.045	ENSCLAG00000003395	-	92	82.826	Chinchilla_lanigera
ENSNGAG00000012455	Gpatch1	100	82.422	ENSCSAG00000004743	GPATCH1	100	82.422	Chlorocebus_sabaeus
ENSNGAG00000012455	Gpatch1	83	77.821	ENSCHOG00000012865	GPATCH1	89	77.821	Choloepus_hoffmanni
ENSNGAG00000012455	Gpatch1	79	68.044	ENSCPBG00000000666	GPATCH1	92	68.044	Chrysemys_picta_bellii
ENSNGAG00000012455	Gpatch1	92	32.772	ENSCING00000012518	-	84	33.990	Ciona_intestinalis
ENSNGAG00000012455	Gpatch1	90	79.863	ENSCANG00000012540	GPATCH1	100	79.863	Colobus_angolensis_palliatus
ENSNGAG00000012455	Gpatch1	97	83.938	ENSCGRG00001016736	Gpatch1	100	83.278	Cricetulus_griseus_chok1gshd
ENSNGAG00000012455	Gpatch1	94	69.809	ENSCGRG00000005069	Gpatch1	91	69.729	Cricetulus_griseus_crigri
ENSNGAG00000012455	Gpatch1	78	51.327	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSNGAG00000012455	Gpatch1	90	51.613	ENSDARG00000033418	gpatch1	92	50.552	Danio_rerio
ENSNGAG00000012455	Gpatch1	92	83.784	ENSDNOG00000005291	GPATCH1	95	84.272	Dasypus_novemcinctus
ENSNGAG00000012455	Gpatch1	94	79.769	ENSDORG00000012546	Gpatch1	95	80.095	Dipodomys_ordii
ENSNGAG00000012455	Gpatch1	99	74.729	ENSETEG00000003626	GPATCH1	92	74.883	Echinops_telfairi
ENSNGAG00000012455	Gpatch1	94	36.482	ENSEBUG00000011286	gpatch1	91	38.276	Eptatretus_burgeri
ENSNGAG00000012455	Gpatch1	91	84.450	ENSEASG00005021162	GPATCH1	93	85.606	Equus_asinus_asinus
ENSNGAG00000012455	Gpatch1	94	84.536	ENSECAG00000022743	GPATCH1	88	84.489	Equus_caballus
ENSNGAG00000012455	Gpatch1	77	77.451	ENSEEUG00000012925	GPATCH1	77	77.451	Erinaceus_europaeus
ENSNGAG00000012455	Gpatch1	99	48.497	ENSELUG00000018195	gpatch1	90	50.282	Esox_lucius
ENSNGAG00000012455	Gpatch1	100	83.906	ENSFCAG00000014917	GPATCH1	100	84.013	Felis_catus
ENSNGAG00000012455	Gpatch1	99	62.036	ENSFALG00000007821	GPATCH1	90	62.354	Ficedula_albicollis
ENSNGAG00000012455	Gpatch1	89	81.863	ENSFDAG00000003871	GPATCH1	100	81.461	Fukomys_damarensis
ENSNGAG00000012455	Gpatch1	76	51.044	ENSGMOG00000003830	gpatch1	95	51.044	Gadus_morhua
ENSNGAG00000012455	Gpatch1	93	61.731	ENSGALG00000004839	GPATCH1	94	63.041	Gallus_gallus
ENSNGAG00000012455	Gpatch1	91	47.931	ENSGACG00000017544	gpatch1	95	49.133	Gasterosteus_aculeatus
ENSNGAG00000012455	Gpatch1	100	62.671	ENSGAGG00000010067	GPATCH1	100	63.425	Gopherus_agassizii
ENSNGAG00000012455	Gpatch1	98	83.716	ENSGGOG00000010862	GPATCH1	100	84.234	Gorilla_gorilla
ENSNGAG00000012455	Gpatch1	82	53.462	ENSHBUG00000023462	gpatch1	90	51.189	Haplochromis_burtoni
ENSNGAG00000012455	Gpatch1	100	81.906	ENSHGLG00000009334	GPATCH1	100	81.585	Heterocephalus_glaber_female
ENSNGAG00000012455	Gpatch1	100	82.013	ENSHGLG00100018074	GPATCH1	100	81.692	Heterocephalus_glaber_male
ENSNGAG00000012455	Gpatch1	93	51.965	ENSIPUG00000014977	gpatch1	90	52.365	Ictalurus_punctatus
ENSNGAG00000012455	Gpatch1	100	84.673	ENSSTOG00000003720	GPATCH1	100	84.673	Ictidomys_tridecemlineatus
ENSNGAG00000012455	Gpatch1	91	87.382	ENSJJAG00000023765	Gpatch1	100	85.899	Jaculus_jaculus
ENSNGAG00000012455	Gpatch1	90	52.515	ENSKMAG00000017950	gpatch1	89	52.852	Kryptolebias_marmoratus
ENSNGAG00000012455	Gpatch1	88	58.333	ENSLACG00000008130	GPATCH1	90	56.611	Latimeria_chalumnae
ENSNGAG00000012455	Gpatch1	82	56.883	ENSLOCG00000001800	gpatch1	90	53.494	Lepisosteus_oculatus
ENSNGAG00000012455	Gpatch1	99	81.828	ENSLAFG00000013589	GPATCH1	100	84.442	Loxodonta_africana
ENSNGAG00000012455	Gpatch1	91	85.124	ENSMFAG00000034418	GPATCH1	96	85.124	Macaca_fascicularis
ENSNGAG00000012455	Gpatch1	100	84.459	ENSMMUG00000011790	GPATCH1	100	84.466	Macaca_mulatta
ENSNGAG00000012455	Gpatch1	100	84.013	ENSMNEG00000045084	GPATCH1	100	84.013	Macaca_nemestrina
ENSNGAG00000012455	Gpatch1	100	74.034	ENSMLEG00000043840	GPATCH1	100	74.034	Mandrillus_leucophaeus
ENSNGAG00000012455	Gpatch1	82	53.699	ENSMZEG00005001926	gpatch1	80	53.512	Maylandia_zebra
ENSNGAG00000012455	Gpatch1	91	62.898	ENSMGAG00000005775	GPATCH1	90	63.604	Meleagris_gallopavo
ENSNGAG00000012455	Gpatch1	91	74.650	ENSMICG00000004829	GPATCH1	93	76.651	Microcebus_murinus
ENSNGAG00000012455	Gpatch1	99	85.129	ENSMOCG00000000174	Gpatch1	92	86.199	Microtus_ochrogaster
ENSNGAG00000012455	Gpatch1	81	50.249	ENSMMOG00000002140	gpatch1	97	48.004	Mola_mola
ENSNGAG00000012455	Gpatch1	92	72.118	ENSMODG00000012226	GPATCH1	100	69.108	Monodelphis_domestica
ENSNGAG00000012455	Gpatch1	99	47.812	ENSMALG00000014386	gpatch1	90	50.573	Monopterus_albus
ENSNGAG00000012455	Gpatch1	100	85.929	ENSMUSG00000063808	Gpatch1	100	95.918	Mus_musculus
ENSNGAG00000012455	Gpatch1	100	84.673	MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	Mus_pahari
ENSNGAG00000012455	Gpatch1	100	85.745	MGP_SPRETEiJ_G0030681	Gpatch1	100	96.939	Mus_spretus
ENSNGAG00000012455	Gpatch1	100	81.545	ENSMPUG00000007658	GPATCH1	100	83.691	Mustela_putorius_furo
ENSNGAG00000012455	Gpatch1	100	83.548	ENSMLUG00000012161	GPATCH1	100	83.548	Myotis_lucifugus
ENSNGAG00000012455	Gpatch1	100	84.120	ENSNLEG00000007659	GPATCH1	100	84.120	Nomascus_leucogenys
ENSNGAG00000012455	Gpatch1	80	65.894	ENSMEUG00000015174	GPATCH1	79	65.940	Notamacropus_eugenii
ENSNGAG00000012455	Gpatch1	99	81.081	ENSODEG00000007103	GPATCH1	99	81.514	Octodon_degus
ENSNGAG00000012455	Gpatch1	82	54.897	ENSONIG00000003302	gpatch1	91	53.450	Oreochromis_niloticus
ENSNGAG00000012455	Gpatch1	99	69.364	ENSOANG00000012732	GPATCH1	99	68.925	Ornithorhynchus_anatinus
ENSNGAG00000012455	Gpatch1	100	83.476	ENSOCUG00000015905	GPATCH1	100	83.262	Oryctolagus_cuniculus
ENSNGAG00000012455	Gpatch1	90	50.885	ENSORLG00000018706	gpatch1	88	51.004	Oryzias_latipes
ENSNGAG00000012455	Gpatch1	90	49.182	ENSOMEG00000022688	gpatch1	90	50.935	Oryzias_melastigma
ENSNGAG00000012455	Gpatch1	85	86.094	ENSOGAG00000004016	GPATCH1	100	86.094	Otolemur_garnettii
ENSNGAG00000012455	Gpatch1	91	83.373	ENSOARG00000004365	GPATCH1	99	82.792	Ovis_aries
ENSNGAG00000012455	Gpatch1	100	84.013	ENSPPAG00000020990	GPATCH1	100	84.013	Pan_paniscus
ENSNGAG00000012455	Gpatch1	100	84.227	ENSPPRG00000017245	GPATCH1	100	84.227	Panthera_pardus
ENSNGAG00000012455	Gpatch1	100	84.764	ENSPTIG00000019649	GPATCH1	100	84.871	Panthera_tigris_altaica
ENSNGAG00000012455	Gpatch1	100	84.013	ENSPTRG00000010803	GPATCH1	100	84.013	Pan_troglodytes
ENSNGAG00000012455	Gpatch1	92	84.959	ENSPANG00000012374	GPATCH1	96	85.211	Papio_anubis
ENSNGAG00000012455	Gpatch1	81	56.354	ENSPKIG00000020745	gpatch1	82	55.090	Paramormyrops_kingsleyae
ENSNGAG00000012455	Gpatch1	100	61.400	ENSPSIG00000013433	GPATCH1	100	60.504	Pelodiscus_sinensis
ENSNGAG00000012455	Gpatch1	100	85.161	ENSPEMG00000000636	Gpatch1	100	85.161	Peromyscus_maniculatus_bairdii
ENSNGAG00000012455	Gpatch1	92	72.268	ENSPCIG00000021003	GPATCH1	95	72.642	Phascolarctos_cinereus
ENSNGAG00000012455	Gpatch1	72	49.778	ENSPREG00000008264	gpatch1	97	45.765	Poecilia_reticulata
ENSNGAG00000012455	Gpatch1	100	81.652	ENSPPYG00000009824	GPATCH1	100	81.652	Pongo_abelii
ENSNGAG00000012455	Gpatch1	83	74.171	ENSPCAG00000005931	GPATCH1	93	74.104	Procavia_capensis
ENSNGAG00000012455	Gpatch1	93	80.069	ENSPCOG00000009674	GPATCH1	97	81.442	Propithecus_coquereli
ENSNGAG00000012455	Gpatch1	84	83.743	ENSPVAG00000017767	GPATCH1	92	83.743	Pteropus_vampyrus
ENSNGAG00000012455	Gpatch1	82	53.985	ENSPNYG00000018189	gpatch1	89	54.183	Pundamilia_nyererei
ENSNGAG00000012455	Gpatch1	90	52.179	ENSPNAG00000013187	gpatch1	90	52.291	Pygocentrus_nattereri
ENSNGAG00000012455	Gpatch1	100	83.459	ENSRNOG00000011584	Gpatch1	100	85.177	Rattus_norvegicus
ENSNGAG00000012455	Gpatch1	100	76.742	ENSRBIG00000034723	GPATCH1	100	76.099	Rhinopithecus_bieti
ENSNGAG00000012455	Gpatch1	100	84.335	ENSRROG00000024428	GPATCH1	100	84.335	Rhinopithecus_roxellana
ENSNGAG00000012455	Gpatch1	100	84.442	ENSSBOG00000034650	GPATCH1	100	84.657	Saimiri_boliviensis_boliviensis
ENSNGAG00000012455	Gpatch1	100	69.947	ENSSHAG00000016016	GPATCH1	100	71.050	Sarcophilus_harrisii
ENSNGAG00000012455	Gpatch1	82	54.789	ENSSFOG00015011535	gpatch1	89	53.233	Scleropages_formosus
ENSNGAG00000012455	Gpatch1	99	45.123	ENSSMAG00000002883	gpatch1	93	48.408	Scophthalmus_maximus
ENSNGAG00000012455	Gpatch1	82	51.815	ENSSDUG00000007444	gpatch1	90	50.280	Seriola_dumerili
ENSNGAG00000012455	Gpatch1	82	52.264	ENSSLDG00000002856	gpatch1	89	52.447	Seriola_lalandi_dorsalis
ENSNGAG00000012455	Gpatch1	73	83.531	ENSSARG00000004108	GPATCH1	72	83.531	Sorex_araneus
ENSNGAG00000012455	Gpatch1	91	84.923	ENSSSCG00000002865	GPATCH1	94	84.923	Sus_scrofa
ENSNGAG00000012455	Gpatch1	99	62.043	ENSTGUG00000009401	GPATCH1	91	63.227	Taeniopygia_guttata
ENSNGAG00000012455	Gpatch1	81	52.294	ENSTRUG00000025081	gpatch1	90	50.408	Takifugu_rubripes
ENSNGAG00000012455	Gpatch1	81	52.294	ENSTRUG00000005785	-	90	50.408	Takifugu_rubripes
ENSNGAG00000012455	Gpatch1	81	53.687	ENSTNIG00000002554	gpatch1	97	54.264	Tetraodon_nigroviridis
ENSNGAG00000012455	Gpatch1	64	73.123	ENSTBEG00000007750	-	84	73.123	Tupaia_belangeri
ENSNGAG00000012455	Gpatch1	91	76.526	ENSTTRG00000012221	GPATCH1	100	76.150	Tursiops_truncatus
ENSNGAG00000012455	Gpatch1	91	84.780	ENSUMAG00000014645	GPATCH1	100	82.578	Ursus_maritimus
ENSNGAG00000012455	Gpatch1	80	94.286	ENSVPAG00000010313	GPATCH1	86	94.565	Vicugna_pacos
ENSNGAG00000012455	Gpatch1	94	84.783	ENSVVUG00000016572	GPATCH1	91	84.859	Vulpes_vulpes
ENSNGAG00000012455	Gpatch1	99	52.754	ENSXETG00000018276	gpatch1	99	52.165	Xenopus_tropicalis