EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000012500 (Gene tree)
Gene ID: 103725353
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 55121 bases
Position: chrKL205213.1:127751-182871
Accession: 103725353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000009937	PRP4	PF08799.11	9.2e-14	1	1
ENSNGAP00000009937	Prp18	PF02840.15	4.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015455	-	1632	XM_008822685	ENSNGAP00000009937	342 (aa)	XP_008820907	UPI0004ED3636

Gene Model

Click here to download ENSNGAG00000012500's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000012500	-	67	92.174	ENSNGAG00000023550	-	82	92.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012500	-	100	99.415	ENSG00000165630	PRPF18	100	99.415	Homo_sapiens
ENSNGAG00000012500	-	100	85.673	ENSAPOG00000024177	prpf18	100	85.673	Acanthochromis_polyacanthus
ENSNGAG00000012500	-	100	98.830	ENSAMEG00000013591	-	100	98.830	Ailuropoda_melanoleuca
ENSNGAG00000012500	-	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSNGAG00000012500	-	98	85.672	ENSAOCG00000006572	prpf18	94	83.041	Amphiprion_ocellaris
ENSNGAG00000012500	-	100	85.965	ENSAPEG00000004564	prpf18	100	85.965	Amphiprion_percula
ENSNGAG00000012500	-	100	84.503	ENSATEG00000000303	prpf18	100	84.503	Anabas_testudineus
ENSNGAG00000012500	-	99	90.882	ENSAPLG00000003387	-	99	90.882	Anas_platyrhynchos
ENSNGAG00000012500	-	100	91.860	ENSACAG00000000818	-	100	91.860	Anolis_carolinensis
ENSNGAG00000012500	-	100	98.830	ENSANAG00000037445	-	100	98.830	Aotus_nancymaae
ENSNGAG00000012500	-	100	85.088	ENSACLG00000026296	prpf18	100	85.088	Astatotilapia_calliptera
ENSNGAG00000012500	-	100	84.286	ENSAMXG00000012848	prpf18	100	84.286	Astyanax_mexicanus
ENSNGAG00000012500	-	100	98.538	ENSBTAG00000017244	PRPF18	100	98.538	Bos_taurus
ENSNGAG00000012500	-	98	38.506	WBGene00009320	F32B6.3	97	38.150	Caenorhabditis_elegans
ENSNGAG00000012500	-	100	98.830	ENSCJAG00000009432	-	100	98.830	Callithrix_jacchus
ENSNGAG00000012500	-	100	98.830	ENSCAFG00000004735	-	100	98.830	Canis_familiaris
ENSNGAG00000012500	-	100	98.830	ENSCAFG00020007712	-	100	98.830	Canis_lupus_dingo
ENSNGAG00000012500	-	100	98.538	ENSCHIG00000000499	-	100	98.538	Capra_hircus
ENSNGAG00000012500	-	100	98.538	ENSTSYG00000003517	-	100	98.538	Carlito_syrichta
ENSNGAG00000012500	-	100	99.415	ENSCPOG00000021069	-	100	99.415	Cavia_porcellus
ENSNGAG00000012500	-	100	98.830	ENSCCAG00000036822	-	100	98.830	Cebus_capucinus
ENSNGAG00000012500	-	100	88.304	ENSCATG00000016633	-	100	88.304	Cercocebus_atys
ENSNGAG00000012500	-	100	98.538	ENSCLAG00000011770	-	100	98.538	Chinchilla_lanigera
ENSNGAG00000012500	-	100	96.866	ENSCSAG00000013109	-	100	96.866	Chlorocebus_sabaeus
ENSNGAG00000012500	-	100	88.764	ENSCPBG00000003100	-	100	89.326	Chrysemys_picta_bellii
ENSNGAG00000012500	-	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSNGAG00000012500	-	99	54.335	ENSCSAVG00000010546	-	99	53.779	Ciona_savignyi
ENSNGAG00000012500	-	100	99.123	ENSCANG00000034900	-	100	99.123	Colobus_angolensis_palliatus
ENSNGAG00000012500	-	100	98.830	ENSCGRG00001023665	Prpf18	100	98.830	Cricetulus_griseus_chok1gshd
ENSNGAG00000012500	-	100	98.830	ENSCGRG00000014690	Prpf18	100	98.830	Cricetulus_griseus_crigri
ENSNGAG00000012500	-	100	83.041	ENSCSEG00000005536	prpf18	99	83.041	Cynoglossus_semilaevis
ENSNGAG00000012500	-	100	84.503	ENSCVAG00000012401	prpf18	100	84.503	Cyprinodon_variegatus
ENSNGAG00000012500	-	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSNGAG00000012500	-	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSNGAG00000012500	-	100	98.538	ENSDORG00000000858	Prpf18	100	98.538	Dipodomys_ordii
ENSNGAG00000012500	-	99	51.917	FBgn0027784	Prp18	98	51.622	Drosophila_melanogaster
ENSNGAG00000012500	-	100	87.135	ENSETEG00000015060	-	100	87.135	Echinops_telfairi
ENSNGAG00000012500	-	100	66.859	ENSEBUG00000016502	prpf18	99	65.994	Eptatretus_burgeri
ENSNGAG00000012500	-	100	99.123	ENSEASG00005019373	-	100	99.123	Equus_asinus_asinus
ENSNGAG00000012500	-	100	99.123	ENSECAG00000006997	PRPF18	100	99.123	Equus_caballus
ENSNGAG00000012500	-	92	62.342	ENSEEUG00000001171	-	100	62.342	Erinaceus_europaeus
ENSNGAG00000012500	-	100	82.507	ENSELUG00000022190	prpf18	100	82.507	Esox_lucius
ENSNGAG00000012500	-	100	98.538	ENSFCAG00000004436	-	100	98.538	Felis_catus
ENSNGAG00000012500	-	92	87.768	ENSFALG00000001912	-	97	88.615	Ficedula_albicollis
ENSNGAG00000012500	-	94	99.062	ENSFDAG00000014026	-	100	99.062	Fukomys_damarensis
ENSNGAG00000012500	-	99	64.058	ENSFDAG00000010713	-	97	64.058	Fukomys_damarensis
ENSNGAG00000012500	-	80	89.011	ENSFHEG00000020125	prpf18	97	89.434	Fundulus_heteroclitus
ENSNGAG00000012500	-	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSNGAG00000012500	-	100	91.813	ENSGALG00000043593	-	100	91.813	Gallus_gallus
ENSNGAG00000012500	-	100	83.333	ENSGAFG00000006034	prpf18	100	83.333	Gambusia_affinis
ENSNGAG00000012500	-	100	81.871	ENSGACG00000012232	prpf18	100	81.871	Gasterosteus_aculeatus
ENSNGAG00000012500	-	100	92.105	ENSGAGG00000016878	-	100	92.105	Gopherus_agassizii
ENSNGAG00000012500	-	92	99.367	ENSGGOG00000025188	-	96	99.367	Gorilla_gorilla
ENSNGAG00000012500	-	100	85.088	ENSHBUG00000010264	prpf18	100	85.088	Haplochromis_burtoni
ENSNGAG00000012500	-	100	98.830	ENSHGLG00000018534	PRPF18	100	98.830	Heterocephalus_glaber_female
ENSNGAG00000012500	-	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSNGAG00000012500	-	100	84.503	ENSHCOG00000015987	prpf18	100	84.503	Hippocampus_comes
ENSNGAG00000012500	-	100	81.870	ENSIPUG00000007432	prpf18	100	82.720	Ictalurus_punctatus
ENSNGAG00000012500	-	100	97.661	ENSSTOG00000008735	-	100	97.661	Ictidomys_tridecemlineatus
ENSNGAG00000012500	-	100	72.046	ENSJJAG00000015191	-	100	72.046	Jaculus_jaculus
ENSNGAG00000012500	-	100	99.415	ENSJJAG00000024041	-	100	99.415	Jaculus_jaculus
ENSNGAG00000012500	-	100	83.333	ENSKMAG00000012124	prpf18	100	83.333	Kryptolebias_marmoratus
ENSNGAG00000012500	-	99	83.432	ENSLBEG00000028466	prpf18	99	83.432	Labrus_bergylta
ENSNGAG00000012500	-	100	86.842	ENSLACG00000009885	prpf18	100	86.842	Latimeria_chalumnae
ENSNGAG00000012500	-	100	90.643	ENSLOCG00000016736	prpf18	100	90.643	Lepisosteus_oculatus
ENSNGAG00000012500	-	100	99.415	ENSLAFG00000007753	-	100	99.415	Loxodonta_africana
ENSNGAG00000012500	-	100	99.415	ENSMFAG00000000540	-	100	99.415	Macaca_fascicularis
ENSNGAG00000012500	-	100	99.415	ENSMMUG00000015071	PRPF18	100	99.415	Macaca_mulatta
ENSNGAG00000012500	-	100	99.415	ENSMNEG00000024679	-	100	99.415	Macaca_nemestrina
ENSNGAG00000012500	-	100	84.211	ENSMLEG00000031715	-	100	84.211	Mandrillus_leucophaeus
ENSNGAG00000012500	-	100	83.626	ENSMAMG00000006610	prpf18	100	83.626	Mastacembelus_armatus
ENSNGAG00000012500	-	100	85.088	ENSMZEG00005019392	prpf18	100	85.088	Maylandia_zebra
ENSNGAG00000012500	-	100	91.813	ENSMGAG00000005023	-	100	91.813	Meleagris_gallopavo
ENSNGAG00000012500	-	100	99.123	ENSMICG00000006572	-	100	99.123	Microcebus_murinus
ENSNGAG00000012500	-	100	99.415	ENSMOCG00000021468	Prpf18	100	99.415	Microtus_ochrogaster
ENSNGAG00000012500	-	100	83.333	ENSMMOG00000013012	prpf18	100	83.333	Mola_mola
ENSNGAG00000012500	-	100	85.965	ENSMODG00000024043	-	100	85.965	Monodelphis_domestica
ENSNGAG00000012500	-	96	90.533	ENSMODG00000016902	-	92	90.533	Monodelphis_domestica
ENSNGAG00000012500	-	100	78.286	ENSMALG00000005486	prpf18	100	78.571	Monopterus_albus
ENSNGAG00000012500	-	100	98.830	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.830	Mus_caroli
ENSNGAG00000012500	-	100	98.538	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSNGAG00000012500	-	100	99.123	MGP_PahariEiJ_G0019203	Prpf18	100	99.123	Mus_pahari
ENSNGAG00000012500	-	100	98.246	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSNGAG00000012500	-	100	98.538	ENSMPUG00000000938	-	100	98.538	Mustela_putorius_furo
ENSNGAG00000012500	-	100	98.538	ENSMLUG00000009200	-	100	98.538	Myotis_lucifugus
ENSNGAG00000012500	-	100	85.088	ENSNBRG00000001778	prpf18	100	85.088	Neolamprologus_brichardi
ENSNGAG00000012500	-	100	99.415	ENSNLEG00000012186	-	100	99.415	Nomascus_leucogenys
ENSNGAG00000012500	-	76	79.923	ENSMEUG00000005032	-	100	65.205	Notamacropus_eugenii
ENSNGAG00000012500	-	77	80.755	ENSOPRG00000002153	-	100	80.755	Ochotona_princeps
ENSNGAG00000012500	-	100	98.538	ENSODEG00000003770	-	100	98.538	Octodon_degus
ENSNGAG00000012500	-	98	84.478	ENSONIG00000014854	prpf18	96	84.478	Oreochromis_niloticus
ENSNGAG00000012500	-	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSNGAG00000012500	-	100	99.123	ENSOCUG00000027756	-	100	95.322	Oryctolagus_cuniculus
ENSNGAG00000012500	-	100	82.286	ENSORLG00000010293	prpf18	100	82.286	Oryzias_latipes
ENSNGAG00000012500	-	100	84.503	ENSORLG00020001530	prpf18	100	84.503	Oryzias_latipes_hni
ENSNGAG00000012500	-	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSNGAG00000012500	-	100	85.673	ENSOMEG00000009167	prpf18	100	85.673	Oryzias_melastigma
ENSNGAG00000012500	-	100	98.246	ENSOGAG00000007294	-	100	98.246	Otolemur_garnettii
ENSNGAG00000012500	-	100	96.011	ENSOARG00000006243	-	100	96.011	Ovis_aries
ENSNGAG00000012500	-	100	99.415	ENSPPAG00000041959	-	100	99.415	Pan_paniscus
ENSNGAG00000012500	-	100	98.538	ENSPPRG00000000107	-	100	98.538	Panthera_pardus
ENSNGAG00000012500	-	100	98.246	ENSPTIG00000021094	-	100	98.246	Panthera_tigris_altaica
ENSNGAG00000012500	-	100	99.415	ENSPTRG00000002306	PRPF18	100	99.415	Pan_troglodytes
ENSNGAG00000012500	-	100	99.123	ENSPANG00000023346	-	100	99.123	Papio_anubis
ENSNGAG00000012500	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.336	Paramormyrops_kingsleyae
ENSNGAG00000012500	-	100	92.398	ENSPSIG00000016064	-	100	92.398	Pelodiscus_sinensis
ENSNGAG00000012500	-	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSNGAG00000012500	-	100	99.123	ENSPEMG00000013704	Prpf18	100	99.123	Peromyscus_maniculatus_bairdii
ENSNGAG00000012500	-	100	74.277	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSNGAG00000012500	-	92	96.203	ENSPCIG00000012963	-	99	96.203	Phascolarctos_cinereus
ENSNGAG00000012500	-	100	82.000	ENSPFOG00000017611	prpf18	100	82.000	Poecilia_formosa
ENSNGAG00000012500	-	100	83.626	ENSPLAG00000000369	prpf18	100	83.626	Poecilia_latipinna
ENSNGAG00000012500	-	100	83.626	ENSPMEG00000005183	prpf18	100	83.626	Poecilia_mexicana
ENSNGAG00000012500	-	100	83.041	ENSPREG00000015232	prpf18	100	83.041	Poecilia_reticulata
ENSNGAG00000012500	-	100	99.123	ENSPPYG00000002101	PRPF18	100	99.123	Pongo_abelii
ENSNGAG00000012500	-	100	80.409	ENSPCAG00000010833	-	100	80.409	Procavia_capensis
ENSNGAG00000012500	-	100	91.813	ENSPCOG00000013057	-	100	91.813	Propithecus_coquereli
ENSNGAG00000012500	-	100	60.819	ENSPVAG00000002947	-	100	60.819	Pteropus_vampyrus
ENSNGAG00000012500	-	100	85.088	ENSPNYG00000003554	prpf18	100	85.088	Pundamilia_nyererei
ENSNGAG00000012500	-	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSNGAG00000012500	-	100	98.246	ENSRNOG00000018396	Prpf18	100	98.246	Rattus_norvegicus
ENSNGAG00000012500	-	100	98.830	ENSRBIG00000028028	-	100	98.830	Rhinopithecus_bieti
ENSNGAG00000012500	-	100	99.123	ENSRROG00000040695	-	100	99.123	Rhinopithecus_roxellana
ENSNGAG00000012500	-	100	98.830	ENSSBOG00000034482	-	100	98.830	Saimiri_boliviensis_boliviensis
ENSNGAG00000012500	-	100	96.199	ENSSHAG00000016463	-	100	96.199	Sarcophilus_harrisii
ENSNGAG00000012500	-	100	76.901	ENSSHAG00000009669	-	100	76.901	Sarcophilus_harrisii
ENSNGAG00000012500	-	77	44.906	ENSSFOG00015021154	-	88	48.918	Scleropages_formosus
ENSNGAG00000012500	-	98	81.449	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSNGAG00000012500	-	100	83.333	ENSSMAG00000005308	prpf18	100	83.333	Scophthalmus_maximus
ENSNGAG00000012500	-	100	85.380	ENSSDUG00000015428	prpf18	100	85.380	Seriola_dumerili
ENSNGAG00000012500	-	100	85.380	ENSSLDG00000023989	prpf18	100	85.380	Seriola_lalandi_dorsalis
ENSNGAG00000012500	-	100	68.421	ENSSARG00000005307	-	100	68.421	Sorex_araneus
ENSNGAG00000012500	-	100	92.105	ENSSPUG00000002619	-	100	92.105	Sphenodon_punctatus
ENSNGAG00000012500	-	100	84.795	ENSSPAG00000019502	prpf18	100	84.795	Stegastes_partitus
ENSNGAG00000012500	-	100	98.830	ENSSSCG00000026354	-	100	98.830	Sus_scrofa
ENSNGAG00000012500	-	100	91.813	ENSTGUG00000002286	-	100	91.813	Taeniopygia_guttata
ENSNGAG00000012500	-	100	82.456	ENSTRUG00000011278	prpf18	100	82.456	Takifugu_rubripes
ENSNGAG00000012500	-	100	82.164	ENSTNIG00000000911	prpf18	100	82.164	Tetraodon_nigroviridis
ENSNGAG00000012500	-	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSNGAG00000012500	-	100	99.123	ENSTTRG00000011117	PRPF18	100	99.123	Tursiops_truncatus
ENSNGAG00000012500	-	95	96.000	ENSUAMG00000001815	-	94	96.000	Ursus_americanus
ENSNGAG00000012500	-	100	93.860	ENSUMAG00000012329	-	100	93.860	Ursus_maritimus
ENSNGAG00000012500	-	100	93.275	ENSVPAG00000011486	-	100	93.275	Vicugna_pacos
ENSNGAG00000012500	-	100	98.830	ENSVVUG00000005453	-	100	98.830	Vulpes_vulpes
ENSNGAG00000012500	-	100	80.870	ENSXETG00000024057	prpf18	100	80.870	Xenopus_tropicalis
ENSNGAG00000012500	-	100	82.849	ENSXCOG00000020414	prpf18	100	82.849	Xiphophorus_couchianus
ENSNGAG00000012500	-	100	83.333	ENSXMAG00000004713	prpf18	91	83.333	Xiphophorus_maculatus