EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000012620 (Gene tree)
Gene ID: 103739034
Gene Symbol: Sbno1
Alias: 9330180L10Rik|sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 61655 bases
Position: chrKL201849.1:1762912-1824566
Accession: 103739034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000010202	ResIII	PF04851.15	5.1e-08	1	1
ENSNGAP00000010190	ResIII	PF04851.15	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015726	-	3750	-	ENSNGAP00000010202	1249 (aa)	-	-
ENSNGAT00000015714	-	5106	XM_008839294	ENSNGAP00000010190	1393 (aa)	XP_008837516	UPI0004ED1895

Gene Model

Click here to download ENSNGAG00000012620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000012620	Sbno1	84	56.825	ENSNGAG00000004308	Sbno2	73	67.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012620	Sbno1	100	98.062	ENSG00000139697	SBNO1	100	98.062	Homo_sapiens
ENSNGAG00000012620	Sbno1	81	84.466	ENSAPOG00000003196	sbno1	98	81.255	Acanthochromis_polyacanthus
ENSNGAG00000012620	Sbno1	100	98.209	ENSAMEG00000015151	SBNO1	100	98.209	Ailuropoda_melanoleuca
ENSNGAG00000012620	Sbno1	98	82.857	ENSACIG00000008088	sbno1	92	82.857	Amphilophus_citrinellus
ENSNGAG00000012620	Sbno1	98	83.689	ENSAOCG00000014859	sbno1	91	83.689	Amphiprion_ocellaris
ENSNGAG00000012620	Sbno1	98	83.689	ENSAPEG00000006069	sbno1	91	83.689	Amphiprion_percula
ENSNGAG00000012620	Sbno1	98	86.051	ENSATEG00000006667	sbno1	92	85.855	Anabas_testudineus
ENSNGAG00000012620	Sbno1	98	95.464	ENSAPLG00000015674	SBNO1	100	92.181	Anas_platyrhynchos
ENSNGAG00000012620	Sbno1	98	94.141	ENSACAG00000015441	SBNO1	81	94.510	Anolis_carolinensis
ENSNGAG00000012620	Sbno1	100	97.846	ENSANAG00000029958	-	99	99.277	Aotus_nancymaae
ENSNGAG00000012620	Sbno1	98	73.502	ENSACLG00000024913	sbno1	99	74.322	Astatotilapia_calliptera
ENSNGAG00000012620	Sbno1	98	88.039	ENSAMXG00000019473	sbno1	92	88.039	Astyanax_mexicanus
ENSNGAG00000012620	Sbno1	98	99.408	ENSBTAG00000020505	SBNO1	99	98.132	Bos_taurus
ENSNGAG00000012620	Sbno1	100	97.846	ENSCJAG00000016599	SBNO1	100	97.846	Callithrix_jacchus
ENSNGAG00000012620	Sbno1	100	97.993	ENSCAFG00000007503	SBNO1	100	97.993	Canis_familiaris
ENSNGAG00000012620	Sbno1	100	97.272	ENSCAFG00020015363	SBNO1	100	97.272	Canis_lupus_dingo
ENSNGAG00000012620	Sbno1	98	99.408	ENSCHIG00000008382	SBNO1	99	97.917	Capra_hircus
ENSNGAG00000012620	Sbno1	100	98.421	ENSTSYG00000012749	SBNO1	100	98.421	Carlito_syrichta
ENSNGAG00000012620	Sbno1	95	99.211	ENSCAPG00000000384	SBNO1	100	97.746	Cavia_aperea
ENSNGAG00000012620	Sbno1	98	99.211	ENSCPOG00000008109	SBNO1	99	99.096	Cavia_porcellus
ENSNGAG00000012620	Sbno1	100	93.472	ENSCCAG00000035316	SBNO1	100	93.472	Cebus_capucinus
ENSNGAG00000012620	Sbno1	98	99.408	ENSCATG00000008239	SBNO1	98	99.458	Cercocebus_atys
ENSNGAG00000012620	Sbno1	100	97.272	ENSCLAG00000008995	SBNO1	99	99.096	Chinchilla_lanigera
ENSNGAG00000012620	Sbno1	83	99.223	ENSCSAG00000002064	SBNO1	100	99.223	Chlorocebus_sabaeus
ENSNGAG00000012620	Sbno1	96	94.231	ENSCHOG00000008814	SBNO1	96	94.231	Choloepus_hoffmanni
ENSNGAG00000012620	Sbno1	98	94.942	ENSCPBG00000025968	SBNO1	99	92.109	Chrysemys_picta_bellii
ENSNGAG00000012620	Sbno1	100	93.047	ENSCANG00000042688	-	100	93.047	Colobus_angolensis_palliatus
ENSNGAG00000012620	Sbno1	100	97.990	ENSCGRG00001017470	Sbno1	100	97.990	Cricetulus_griseus_chok1gshd
ENSNGAG00000012620	Sbno1	100	97.990	ENSCGRG00000004756	Sbno1	100	97.990	Cricetulus_griseus_crigri
ENSNGAG00000012620	Sbno1	98	83.852	ENSCSEG00000011919	sbno1	92	83.852	Cynoglossus_semilaevis
ENSNGAG00000012620	Sbno1	98	84.180	ENSCVAG00000007038	sbno1	92	84.180	Cyprinodon_variegatus
ENSNGAG00000012620	Sbno1	98	86.888	ENSDARG00000099080	sbno1	99	80.000	Danio_rerio
ENSNGAG00000012620	Sbno1	100	97.082	ENSDNOG00000017147	SBNO1	99	96.957	Dasypus_novemcinctus
ENSNGAG00000012620	Sbno1	98	98.062	ENSDORG00000015261	Sbno1	92	98.062	Dipodomys_ordii
ENSNGAG00000012620	Sbno1	90	100.000	ENSETEG00000005620	SBNO1	85	98.582	Echinops_telfairi
ENSNGAG00000012620	Sbno1	73	86.802	ENSEBUG00000013823	sbno1	85	86.802	Eptatretus_burgeri
ENSNGAG00000012620	Sbno1	55	96.215	ENSEASG00005012595	-	91	98.206	Equus_asinus_asinus
ENSNGAG00000012620	Sbno1	100	98.564	ENSECAG00000006127	SBNO1	100	98.564	Equus_caballus
ENSNGAG00000012620	Sbno1	83	97.802	ENSEEUG00000003793	SBNO1	83	97.802	Erinaceus_europaeus
ENSNGAG00000012620	Sbno1	98	88.039	ENSELUG00000002886	sbno1	92	88.039	Esox_lucius
ENSNGAG00000012620	Sbno1	98	99.408	ENSFCAG00000015331	SBNO1	99	98.348	Felis_catus
ENSNGAG00000012620	Sbno1	98	95.464	ENSFALG00000009273	SBNO1	100	92.109	Ficedula_albicollis
ENSNGAG00000012620	Sbno1	99	95.546	ENSFDAG00000014232	SBNO1	99	95.546	Fukomys_damarensis
ENSNGAG00000012620	Sbno1	98	84.375	ENSFHEG00000007360	sbno1	92	84.375	Fundulus_heteroclitus
ENSNGAG00000012620	Sbno1	94	85.347	ENSGMOG00000018229	sbno1	99	79.011	Gadus_morhua
ENSNGAG00000012620	Sbno1	89	96.701	ENSGALG00000003392	SBNO1	99	92.289	Gallus_gallus
ENSNGAG00000012620	Sbno1	98	84.570	ENSGAFG00000003960	sbno1	92	84.570	Gambusia_affinis
ENSNGAG00000012620	Sbno1	94	85.039	ENSGACG00000015633	sbno1	99	78.947	Gasterosteus_aculeatus
ENSNGAG00000012620	Sbno1	98	95.136	ENSGAGG00000001065	SBNO1	99	95.298	Gopherus_agassizii
ENSNGAG00000012620	Sbno1	100	97.918	ENSGGOG00000015000	SBNO1	100	97.918	Gorilla_gorilla
ENSNGAG00000012620	Sbno1	98	67.431	ENSHBUG00000011910	sbno1	99	68.679	Haplochromis_burtoni
ENSNGAG00000012620	Sbno1	100	97.416	ENSHGLG00000014165	-	99	99.096	Heterocephalus_glaber_female
ENSNGAG00000012620	Sbno1	92	83.269	ENSHCOG00000003246	sbno1	95	84.980	Hippocampus_comes
ENSNGAG00000012620	Sbno1	98	86.888	ENSIPUG00000015830	Sbno1	93	88.978	Ictalurus_punctatus
ENSNGAG00000012620	Sbno1	100	98.134	ENSSTOG00000023221	SBNO1	99	99.277	Ictidomys_tridecemlineatus
ENSNGAG00000012620	Sbno1	100	98.062	ENSJJAG00000001741	Sbno1	100	98.062	Jaculus_jaculus
ENSNGAG00000012620	Sbno1	98	84.375	ENSKMAG00000009696	sbno1	92	84.375	Kryptolebias_marmoratus
ENSNGAG00000012620	Sbno1	98	86.328	ENSLBEG00000007623	sbno1	92	86.328	Labrus_bergylta
ENSNGAG00000012620	Sbno1	99	81.357	ENSLACG00000017227	SBNO1	99	90.625	Latimeria_chalumnae
ENSNGAG00000012620	Sbno1	98	89.824	ENSLOCG00000005725	sbno1	92	89.824	Lepisosteus_oculatus
ENSNGAG00000012620	Sbno1	100	97.272	ENSLAFG00000002135	SBNO1	100	97.272	Loxodonta_africana
ENSNGAG00000012620	Sbno1	100	98.134	ENSMFAG00000031429	SBNO1	100	98.134	Macaca_fascicularis
ENSNGAG00000012620	Sbno1	100	98.134	ENSMMUG00000011496	SBNO1	100	98.134	Macaca_mulatta
ENSNGAG00000012620	Sbno1	98	99.408	ENSMLEG00000033260	SBNO1	99	99.458	Mandrillus_leucophaeus
ENSNGAG00000012620	Sbno1	98	86.051	ENSMAMG00000005473	sbno1	92	86.051	Mastacembelus_armatus
ENSNGAG00000012620	Sbno1	98	95.858	ENSMGAG00000003274	SBNO1	100	92.181	Meleagris_gallopavo
ENSNGAG00000012620	Sbno1	53	98.941	ENSMAUG00000004834	-	99	98.941	Mesocricetus_auratus
ENSNGAG00000012620	Sbno1	100	97.344	ENSMICG00000006573	-	100	97.344	Microcebus_murinus
ENSNGAG00000012620	Sbno1	98	98.529	ENSMOCG00000009390	Sbno1	100	97.509	Microtus_ochrogaster
ENSNGAG00000012620	Sbno1	98	85.049	ENSMMOG00000008691	sbno1	91	85.049	Mola_mola
ENSNGAG00000012620	Sbno1	98	97.239	ENSMODG00000012470	SBNO1	98	94.684	Monodelphis_domestica
ENSNGAG00000012620	Sbno1	98	83.398	ENSMALG00000001056	sbno1	92	83.398	Monopterus_albus
ENSNGAG00000012620	Sbno1	98	99.211	MGP_CAROLIEiJ_G0027749	Sbno1	99	98.941	Mus_caroli
ENSNGAG00000012620	Sbno1	98	99.211	ENSMUSG00000038095	Sbno1	99	99.092	Mus_musculus
ENSNGAG00000012620	Sbno1	99	98.060	MGP_PahariEiJ_G0024329	Sbno1	99	98.941	Mus_pahari
ENSNGAG00000012620	Sbno1	98	99.211	MGP_SPRETEiJ_G0028747	Sbno1	99	99.092	Mus_spretus
ENSNGAG00000012620	Sbno1	100	98.349	ENSMPUG00000001658	SBNO1	100	98.349	Mustela_putorius_furo
ENSNGAG00000012620	Sbno1	100	97.775	ENSMLUG00000017159	SBNO1	100	97.775	Myotis_lucifugus
ENSNGAG00000012620	Sbno1	99	73.963	ENSNBRG00000019189	sbno1	99	74.412	Neolamprologus_brichardi
ENSNGAG00000012620	Sbno1	100	94.472	ENSNLEG00000001502	SBNO1	100	94.472	Nomascus_leucogenys
ENSNGAG00000012620	Sbno1	61	96.774	ENSMEUG00000008768	-	93	88.608	Notamacropus_eugenii
ENSNGAG00000012620	Sbno1	98	97.441	ENSOPRG00000011054	SBNO1	100	94.409	Ochotona_princeps
ENSNGAG00000012620	Sbno1	98	99.216	ENSODEG00000009997	SBNO1	100	98.043	Octodon_degus
ENSNGAG00000012620	Sbno1	98	84.180	ENSONIG00000015348	sbno1	92	84.180	Oreochromis_niloticus
ENSNGAG00000012620	Sbno1	98	98.826	ENSOCUG00000002441	SBNO1	95	96.061	Oryctolagus_cuniculus
ENSNGAG00000012620	Sbno1	98	83.497	ENSORLG00000001593	sbno1	95	82.913	Oryzias_latipes
ENSNGAG00000012620	Sbno1	98	83.497	ENSORLG00020015216	sbno1	92	83.497	Oryzias_latipes_hni
ENSNGAG00000012620	Sbno1	98	83.694	ENSORLG00015002726	sbno1	92	83.694	Oryzias_latipes_hsok
ENSNGAG00000012620	Sbno1	98	83.858	ENSOMEG00000019313	sbno1	99	75.035	Oryzias_melastigma
ENSNGAG00000012620	Sbno1	53	95.159	ENSOGAG00000010781	-	99	95.159	Otolemur_garnettii
ENSNGAG00000012620	Sbno1	98	99.408	ENSOARG00000004404	SBNO1	99	97.704	Ovis_aries
ENSNGAG00000012620	Sbno1	100	97.990	ENSPPAG00000024635	SBNO1	100	97.990	Pan_paniscus
ENSNGAG00000012620	Sbno1	98	99.408	ENSPPRG00000022092	SBNO1	99	98.348	Panthera_pardus
ENSNGAG00000012620	Sbno1	100	98.062	ENSPTIG00000017803	SBNO1	100	98.062	Panthera_tigris_altaica
ENSNGAG00000012620	Sbno1	100	98.062	ENSPTRG00000005597	SBNO1	100	98.062	Pan_troglodytes
ENSNGAG00000012620	Sbno1	100	98.134	ENSPANG00000011640	SBNO1	99	99.458	Papio_anubis
ENSNGAG00000012620	Sbno1	98	87.280	ENSPKIG00000001441	sbno1	99	80.714	Paramormyrops_kingsleyae
ENSNGAG00000012620	Sbno1	93	90.766	ENSPSIG00000009256	-	100	87.646	Pelodiscus_sinensis
ENSNGAG00000012620	Sbno1	98	94.922	ENSPSIG00000009572	-	100	91.351	Pelodiscus_sinensis
ENSNGAG00000012620	Sbno1	100	97.631	ENSPEMG00000016087	Sbno1	100	97.631	Peromyscus_maniculatus_bairdii
ENSNGAG00000012620	Sbno1	98	97.041	ENSPCIG00000010985	SBNO1	99	94.472	Phascolarctos_cinereus
ENSNGAG00000012620	Sbno1	98	84.570	ENSPFOG00000005069	sbno1	92	84.570	Poecilia_formosa
ENSNGAG00000012620	Sbno1	98	84.570	ENSPLAG00000015015	sbno1	92	84.570	Poecilia_latipinna
ENSNGAG00000012620	Sbno1	98	84.570	ENSPMEG00000021212	sbno1	92	84.570	Poecilia_mexicana
ENSNGAG00000012620	Sbno1	98	84.180	ENSPREG00000017746	sbno1	92	84.180	Poecilia_reticulata
ENSNGAG00000012620	Sbno1	100	97.703	ENSPPYG00000005084	SBNO1	100	97.703	Pongo_abelii
ENSNGAG00000012620	Sbno1	89	92.466	ENSPCAG00000008634	SBNO1	88	92.435	Procavia_capensis
ENSNGAG00000012620	Sbno1	100	98.421	ENSPCOG00000024277	SBNO1	100	98.421	Propithecus_coquereli
ENSNGAG00000012620	Sbno1	90	99.345	ENSPVAG00000015304	SBNO1	87	99.008	Pteropus_vampyrus
ENSNGAG00000012620	Sbno1	98	84.180	ENSPNYG00000004291	sbno1	92	84.180	Pundamilia_nyererei
ENSNGAG00000012620	Sbno1	98	88.454	ENSPNAG00000015622	sbno1	92	88.454	Pygocentrus_nattereri
ENSNGAG00000012620	Sbno1	98	99.211	ENSRNOG00000001064	Sbno1	99	98.217	Rattus_norvegicus
ENSNGAG00000012620	Sbno1	100	98.277	ENSRROG00000034230	SBNO1	99	99.458	Rhinopithecus_roxellana
ENSNGAG00000012620	Sbno1	96	92.857	ENSSBOG00000015422	SBNO1	100	92.857	Saimiri_boliviensis_boliviensis
ENSNGAG00000012620	Sbno1	98	87.476	ENSSFOG00015019025	sbno1	92	87.476	Scleropages_formosus
ENSNGAG00000012620	Sbno1	98	83.984	ENSSMAG00000013640	sbno1	92	83.984	Scophthalmus_maximus
ENSNGAG00000012620	Sbno1	98	85.658	ENSSDUG00000023480	sbno1	92	85.658	Seriola_dumerili
ENSNGAG00000012620	Sbno1	98	85.658	ENSSLDG00000007928	sbno1	92	85.658	Seriola_lalandi_dorsalis
ENSNGAG00000012620	Sbno1	89	98.058	ENSSARG00000002594	SBNO1	89	98.058	Sorex_araneus
ENSNGAG00000012620	Sbno1	98	94.303	ENSSPUG00000012640	SBNO1	100	89.383	Sphenodon_punctatus
ENSNGAG00000012620	Sbno1	98	84.180	ENSSPAG00000016244	sbno1	92	84.180	Stegastes_partitus
ENSNGAG00000012620	Sbno1	100	98.205	ENSSSCG00000009776	SBNO1	100	98.205	Sus_scrofa
ENSNGAG00000012620	Sbno1	98	95.661	ENSTGUG00000005380	SBNO1	100	92.037	Taeniopygia_guttata
ENSNGAG00000012620	Sbno1	97	85.771	ENSTRUG00000018490	sbno1	92	85.771	Takifugu_rubripes
ENSNGAG00000012620	Sbno1	56	70.900	ENSTNIG00000013506	sbno1	99	71.004	Tetraodon_nigroviridis
ENSNGAG00000012620	Sbno1	100	98.564	ENSUAMG00000019671	SBNO1	100	98.564	Ursus_americanus
ENSNGAG00000012620	Sbno1	100	98.564	ENSUMAG00000004002	SBNO1	100	98.564	Ursus_maritimus
ENSNGAG00000012620	Sbno1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSNGAG00000012620	Sbno1	100	98.205	ENSVVUG00000027807	SBNO1	100	98.205	Vulpes_vulpes
ENSNGAG00000012620	Sbno1	98	92.843	ENSXETG00000031930	SBNO1	92	92.843	Xenopus_tropicalis
ENSNGAG00000012620	Sbno1	87	85.827	ENSXCOG00000011607	sbno1	90	85.602	Xiphophorus_couchianus
ENSNGAG00000012620	Sbno1	98	84.375	ENSXMAG00000002140	sbno1	92	84.375	Xiphophorus_maculatus