EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000012688 (Gene tree)
Gene ID: 103728416
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like 2
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 603 bases
Position: chrAXCS01350666.1:769-1371
Accession: 103728416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000010206	RRM_5	PF13893.6	2.8e-06	1	1
ENSNGAP00000010206	RRM_1	PF00076.22	5.2e-43	1	2
ENSNGAP00000010206	RRM_1	PF00076.22	5.2e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000015730	-	603	XM_008826440	ENSNGAP00000010206	200 (aa)	XP_008824662	-

Gene Model

Click here to download ENSNGAG00000012688's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03013	RNA transport	KEGG
ngi03015	mRNA surveillance pathway	KEGG
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000012688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000012688	-	98	71.939	ENSNGAG00000000987	Pabpc6	58	75.410
ENSNGAG00000012688	-	98	62.264	ENSNGAG00000023773	-	60	64.641
ENSNGAG00000012688	-	86	39.759	ENSNGAG00000004371	Pabpc5	80	40.476
ENSNGAG00000012688	-	79	32.716	ENSNGAG00000020427	Tial1	74	31.818
ENSNGAG00000012688	-	85	32.895	ENSNGAG00000019590	Elavl1	94	32.895
ENSNGAG00000012688	-	79	32.877	ENSNGAG00000021612	Celf3	53	32.877
ENSNGAG00000012688	-	98	78.571	ENSNGAG00000000996	Pabpc1	58	81.967
ENSNGAG00000012688	-	99	69.388	ENSNGAG00000016040	Pabpc2	58	71.978
ENSNGAG00000012688	-	99	64.467	ENSNGAG00000010458	Pabpc1l	60	69.101
ENSNGAG00000012688	-	97	30.263	ENSNGAG00000011970	Tia1	85	33.333
ENSNGAG00000012688	-	92	68.306	ENSNGAG00000023820	-	56	68.306
ENSNGAG00000012688	-	98	75.510	ENSNGAG00000018292	Pabpc4	60	79.235
ENSNGAG00000012688	-	98	61.735	ENSNGAG00000001502	Pabpc4l	98	63.388

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000012688	-	100	96.500	ENSG00000184388	PABPC1L2B	100	96.500	Homo_sapiens
ENSNGAG00000012688	-	100	96.500	ENSG00000186288	PABPC1L2A	100	96.500	Homo_sapiens
ENSNGAG00000012688	-	98	78.061	ENSAPOG00000017776	pabpc1b	60	81.421	Acanthochromis_polyacanthus
ENSNGAG00000012688	-	98	78.571	ENSAPOG00000015105	pabpc1a	58	81.967	Acanthochromis_polyacanthus
ENSNGAG00000012688	-	100	97.000	ENSAMEG00000019441	-	100	97.000	Ailuropoda_melanoleuca
ENSNGAG00000012688	-	98	78.061	ENSACIG00000018366	pabpc1b	59	80.874	Amphilophus_citrinellus
ENSNGAG00000012688	-	98	78.571	ENSACIG00000004685	pabpc1a	58	81.967	Amphilophus_citrinellus
ENSNGAG00000012688	-	98	78.571	ENSAOCG00000011656	pabpc1a	58	81.967	Amphiprion_ocellaris
ENSNGAG00000012688	-	98	78.061	ENSAOCG00000019839	pabpc1b	58	81.421	Amphiprion_ocellaris
ENSNGAG00000012688	-	98	78.061	ENSAPEG00000010435	pabpc1b	58	81.421	Amphiprion_percula
ENSNGAG00000012688	-	98	78.571	ENSAPEG00000006963	pabpc1a	58	81.967	Amphiprion_percula
ENSNGAG00000012688	-	98	78.571	ENSATEG00000012917	pabpc1b	58	81.421	Anabas_testudineus
ENSNGAG00000012688	-	98	78.571	ENSATEG00000024852	pabpc1a	58	81.967	Anabas_testudineus
ENSNGAG00000012688	-	100	96.500	ENSANAG00000019429	-	100	96.500	Aotus_nancymaae
ENSNGAG00000012688	-	100	96.500	ENSANAG00000019431	-	100	96.500	Aotus_nancymaae
ENSNGAG00000012688	-	98	77.551	ENSACLG00000014335	pabpc1b	58	80.874	Astatotilapia_calliptera
ENSNGAG00000012688	-	98	78.571	ENSACLG00000009399	pabpc1a	68	80.838	Astatotilapia_calliptera
ENSNGAG00000012688	-	98	78.061	ENSAMXG00000008599	pabpc1b	58	81.421	Astyanax_mexicanus
ENSNGAG00000012688	-	100	97.500	ENSBTAG00000052491	-	94	97.500	Bos_taurus
ENSNGAG00000012688	-	100	97.000	ENSBTAG00000050902	-	95	97.000	Bos_taurus
ENSNGAG00000012688	-	100	96.500	ENSCJAG00000041326	-	100	96.500	Callithrix_jacchus
ENSNGAG00000012688	-	100	97.000	ENSCAFG00020002052	-	96	97.000	Canis_lupus_dingo
ENSNGAG00000012688	-	100	97.000	ENSCHIG00000011138	-	100	97.000	Capra_hircus
ENSNGAG00000012688	-	100	96.500	ENSCHIG00000006283	-	100	96.500	Capra_hircus
ENSNGAG00000012688	-	100	97.000	ENSTSYG00000001775	-	100	97.000	Carlito_syrichta
ENSNGAG00000012688	-	100	97.000	ENSCPOG00000009525	-	100	97.000	Cavia_porcellus
ENSNGAG00000012688	-	100	96.500	ENSCCAG00000031524	-	100	96.500	Cebus_capucinus
ENSNGAG00000012688	-	100	96.500	ENSCATG00000042826	-	100	96.500	Cercocebus_atys
ENSNGAG00000012688	-	100	96.500	ENSCATG00000043125	-	100	96.500	Cercocebus_atys
ENSNGAG00000012688	-	100	96.500	ENSCLAG00000017409	-	100	96.500	Chinchilla_lanigera
ENSNGAG00000012688	-	100	96.500	ENSCLAG00000017412	-	100	96.500	Chinchilla_lanigera
ENSNGAG00000012688	-	100	96.500	ENSCSAG00000000102	-	100	96.500	Chlorocebus_sabaeus
ENSNGAG00000012688	-	99	94.975	ENSCGRG00001023387	-	98	94.975	Cricetulus_griseus_chok1gshd
ENSNGAG00000012688	-	98	77.551	ENSCSEG00000015241	-	58	80.874	Cynoglossus_semilaevis
ENSNGAG00000012688	-	98	78.571	ENSCSEG00000013324	pabpc1a	58	81.967	Cynoglossus_semilaevis
ENSNGAG00000012688	-	98	79.082	ENSCVAG00000005489	pabpc1b	58	81.967	Cyprinodon_variegatus
ENSNGAG00000012688	-	98	78.571	ENSCVAG00000021872	pabpc1a	58	81.967	Cyprinodon_variegatus
ENSNGAG00000012688	-	98	78.061	ENSDARG00000017219	pabpc1a	58	81.421	Danio_rerio
ENSNGAG00000012688	-	98	77.551	ENSDARG00000021140	pabpc1b	92	86.885	Danio_rerio
ENSNGAG00000012688	-	100	95.000	ENSDNOG00000030926	-	100	95.000	Dasypus_novemcinctus
ENSNGAG00000012688	-	100	97.000	ENSDORG00000011362	-	100	97.000	Dipodomys_ordii
ENSNGAG00000012688	-	100	97.500	ENSEASG00005010399	-	95	97.500	Equus_asinus_asinus
ENSNGAG00000012688	-	100	97.500	ENSECAG00000002620	-	95	97.500	Equus_caballus
ENSNGAG00000012688	-	100	92.000	ENSEEUG00000008203	-	100	92.000	Erinaceus_europaeus
ENSNGAG00000012688	-	98	78.061	ENSELUG00000003614	pabpc1a	58	81.421	Esox_lucius
ENSNGAG00000012688	-	93	56.684	ENSELUG00000005389	-	75	58.333	Esox_lucius
ENSNGAG00000012688	-	98	78.571	ENSELUG00000015062	-	58	81.967	Esox_lucius
ENSNGAG00000012688	-	100	97.000	ENSFCAG00000039701	-	100	97.000	Felis_catus
ENSNGAG00000012688	-	100	97.000	ENSFDAG00000005484	-	100	97.000	Fukomys_damarensis
ENSNGAG00000012688	-	98	78.571	ENSFHEG00000018979	pabpc1a	58	81.967	Fundulus_heteroclitus
ENSNGAG00000012688	-	98	78.571	ENSFHEG00000008186	pabpc1b	58	81.421	Fundulus_heteroclitus
ENSNGAG00000012688	-	98	78.061	ENSGMOG00000013448	pabpc1a	57	81.421	Gadus_morhua
ENSNGAG00000012688	-	98	78.061	ENSGMOG00000002448	-	57	81.421	Gadus_morhua
ENSNGAG00000012688	-	98	79.082	ENSGAFG00000010193	pabpc1b	60	81.967	Gambusia_affinis
ENSNGAG00000012688	-	98	78.571	ENSGAFG00000019750	pabpc1a	61	81.967	Gambusia_affinis
ENSNGAG00000012688	-	98	78.571	ENSGACG00000003771	pabpc1b	64	81.421	Gasterosteus_aculeatus
ENSNGAG00000012688	-	98	78.571	ENSGACG00000003572	pabpc1a	58	81.967	Gasterosteus_aculeatus
ENSNGAG00000012688	-	100	96.500	ENSGGOG00000043933	-	100	96.500	Gorilla_gorilla
ENSNGAG00000012688	-	100	96.500	ENSGGOG00000038606	-	100	96.500	Gorilla_gorilla
ENSNGAG00000012688	-	98	78.571	ENSHBUG00000020487	pabpc1a	68	80.838	Haplochromis_burtoni
ENSNGAG00000012688	-	98	77.551	ENSHBUG00000002075	pabpc1b	60	80.874	Haplochromis_burtoni
ENSNGAG00000012688	-	100	96.000	ENSHGLG00000019762	-	100	96.000	Heterocephalus_glaber_female
ENSNGAG00000012688	-	100	96.000	ENSHGLG00000019668	-	100	96.000	Heterocephalus_glaber_female
ENSNGAG00000012688	-	100	96.000	ENSHGLG00100020854	-	100	96.000	Heterocephalus_glaber_male
ENSNGAG00000012688	-	95	67.196	ENSHCOG00000003175	pabpc1b	69	68.852	Hippocampus_comes
ENSNGAG00000012688	-	98	78.571	ENSHCOG00000013502	pabpc1a	58	81.967	Hippocampus_comes
ENSNGAG00000012688	-	98	78.061	ENSIPUG00000010791	-	61	81.421	Ictalurus_punctatus
ENSNGAG00000012688	-	98	59.794	ENSIPUG00000021244	-	52	64.000	Ictalurus_punctatus
ENSNGAG00000012688	-	98	78.061	ENSIPUG00000008848	pabpc1a	59	81.421	Ictalurus_punctatus
ENSNGAG00000012688	-	100	97.500	ENSSTOG00000026028	-	100	97.500	Ictidomys_tridecemlineatus
ENSNGAG00000012688	-	100	97.500	ENSSTOG00000022096	-	100	97.500	Ictidomys_tridecemlineatus
ENSNGAG00000012688	-	100	99.000	ENSJJAG00000007037	-	100	99.000	Jaculus_jaculus
ENSNGAG00000012688	-	98	78.571	ENSKMAG00000008049	pabpc1b	63	81.421	Kryptolebias_marmoratus
ENSNGAG00000012688	-	98	78.571	ENSKMAG00000000605	pabpc1a	58	81.967	Kryptolebias_marmoratus
ENSNGAG00000012688	-	98	78.571	ENSLBEG00000024002	-	58	81.967	Labrus_bergylta
ENSNGAG00000012688	-	98	78.061	ENSLBEG00000026845	pabpc1b	58	81.421	Labrus_bergylta
ENSNGAG00000012688	-	99	95.477	ENSLAFG00000023096	-	99	95.477	Loxodonta_africana
ENSNGAG00000012688	-	100	96.020	ENSMFAG00000028878	-	100	96.020	Macaca_fascicularis
ENSNGAG00000012688	-	100	96.500	ENSMMUG00000037681	-	100	96.500	Macaca_mulatta
ENSNGAG00000012688	-	100	96.500	ENSMMUG00000039929	-	100	96.500	Macaca_mulatta
ENSNGAG00000012688	-	100	96.500	ENSMMUG00000009740	-	100	96.500	Macaca_mulatta
ENSNGAG00000012688	-	100	96.500	ENSMNEG00000037732	-	100	96.500	Macaca_nemestrina
ENSNGAG00000012688	-	100	96.500	ENSMLEG00000027495	-	100	96.500	Mandrillus_leucophaeus
ENSNGAG00000012688	-	98	78.571	ENSMAMG00000004502	-	68	80.838	Mastacembelus_armatus
ENSNGAG00000012688	-	98	78.571	ENSMAMG00000014610	pabpc1b	59	81.421	Mastacembelus_armatus
ENSNGAG00000012688	-	98	77.551	ENSMZEG00005026745	pabpc1b	58	80.874	Maylandia_zebra
ENSNGAG00000012688	-	98	78.571	ENSMZEG00005025416	pabpc1a	68	80.838	Maylandia_zebra
ENSNGAG00000012688	-	100	97.500	ENSMICG00000047642	-	100	97.500	Microcebus_murinus
ENSNGAG00000012688	-	98	78.061	ENSMMOG00000018009	pabpc1b	62	81.421	Mola_mola
ENSNGAG00000012688	-	98	78.571	ENSMMOG00000018044	pabpc1a	68	80.838	Mola_mola
ENSNGAG00000012688	-	98	72.449	ENSMODG00000013156	-	58	75.956	Monodelphis_domestica
ENSNGAG00000012688	-	98	65.641	ENSMODG00000015024	-	57	69.231	Monodelphis_domestica
ENSNGAG00000012688	-	98	78.571	ENSMALG00000013020	-	62	81.967	Monopterus_albus
ENSNGAG00000012688	-	98	78.571	ENSMALG00000006066	pabpc1b	63	81.421	Monopterus_albus
ENSNGAG00000012688	-	98	77.551	ENSNBRG00000013737	pabpc1b	62	80.874	Neolamprologus_brichardi
ENSNGAG00000012688	-	98	78.571	ENSNBRG00000003068	-	68	80.838	Neolamprologus_brichardi
ENSNGAG00000012688	-	100	96.500	ENSNLEG00000018128	-	100	96.500	Nomascus_leucogenys
ENSNGAG00000012688	-	100	94.500	ENSODEG00000018540	-	100	94.500	Octodon_degus
ENSNGAG00000012688	-	98	77.551	ENSONIG00000002717	pabpc1b	58	80.874	Oreochromis_niloticus
ENSNGAG00000012688	-	98	78.571	ENSONIG00000006871	-	58	81.967	Oreochromis_niloticus
ENSNGAG00000012688	-	100	97.000	ENSOCUG00000002565	-	100	97.000	Oryctolagus_cuniculus
ENSNGAG00000012688	-	98	78.571	ENSORLG00000002691	pabpc1a	68	80.838	Oryzias_latipes
ENSNGAG00000012688	-	98	75.510	ENSORLG00000003008	-	58	78.689	Oryzias_latipes
ENSNGAG00000012688	-	98	75.510	ENSORLG00020022259	-	58	78.689	Oryzias_latipes_hni
ENSNGAG00000012688	-	98	78.571	ENSORLG00020022398	pabpc1a	58	81.967	Oryzias_latipes_hni
ENSNGAG00000012688	-	98	78.571	ENSORLG00015013633	pabpc1	58	81.967	Oryzias_latipes_hsok
ENSNGAG00000012688	-	98	75.510	ENSORLG00015010932	-	58	78.689	Oryzias_latipes_hsok
ENSNGAG00000012688	-	98	75.000	ENSOMEG00000013627	pabpc1b	67	79.042	Oryzias_melastigma
ENSNGAG00000012688	-	98	78.571	ENSOMEG00000020219	pabpc1a	58	81.967	Oryzias_melastigma
ENSNGAG00000012688	-	100	97.500	ENSOGAG00000026047	-	100	97.500	Otolemur_garnettii
ENSNGAG00000012688	-	100	97.500	ENSOGAG00000029513	-	100	97.500	Otolemur_garnettii
ENSNGAG00000012688	-	100	96.500	ENSOARG00000005943	-	100	96.500	Ovis_aries
ENSNGAG00000012688	-	100	96.500	ENSPPAG00000012920	-	100	96.500	Pan_paniscus
ENSNGAG00000012688	-	100	97.000	ENSPPRG00000011804	-	100	97.000	Panthera_pardus
ENSNGAG00000012688	-	100	97.000	ENSPPRG00000011809	-	100	97.000	Panthera_pardus
ENSNGAG00000012688	-	100	96.500	ENSPTRG00000028252	-	100	96.500	Pan_troglodytes
ENSNGAG00000012688	-	100	96.500	ENSPANG00000011549	-	100	96.500	Papio_anubis
ENSNGAG00000012688	-	98	78.061	ENSPKIG00000005676	pabpc1b	58	81.421	Paramormyrops_kingsleyae
ENSNGAG00000012688	-	98	78.571	ENSPMGG00000023134	-	79	81.421	Periophthalmus_magnuspinnatus
ENSNGAG00000012688	-	98	77.551	ENSPMGG00000022487	pabpc1a	75	81.967	Periophthalmus_magnuspinnatus
ENSNGAG00000012688	-	98	78.571	ENSPFOG00000010815	pabpc1a	57	81.967	Poecilia_formosa
ENSNGAG00000012688	-	98	78.571	ENSPFOG00000005917	pabpc1b	58	81.421	Poecilia_formosa
ENSNGAG00000012688	-	98	78.571	ENSPLAG00000004114	pabpc1a	58	81.967	Poecilia_latipinna
ENSNGAG00000012688	-	98	79.082	ENSPLAG00000001388	pabpc1b	58	81.967	Poecilia_latipinna
ENSNGAG00000012688	-	98	78.571	ENSPMEG00000001334	pabpc1a	58	81.967	Poecilia_mexicana
ENSNGAG00000012688	-	98	78.571	ENSPMEG00000014399	pabpc1b	58	81.421	Poecilia_mexicana
ENSNGAG00000012688	-	98	79.082	ENSPREG00000010911	pabpc1b	60	81.967	Poecilia_reticulata
ENSNGAG00000012688	-	98	78.571	ENSPREG00000019595	pabpc1a	92	86.885	Poecilia_reticulata
ENSNGAG00000012688	-	100	96.500	ENSPPYG00000020468	-	100	96.500	Pongo_abelii
ENSNGAG00000012688	-	100	96.000	ENSPCAG00000005308	-	100	96.000	Procavia_capensis
ENSNGAG00000012688	-	100	98.000	ENSPCOG00000026349	-	100	98.000	Propithecus_coquereli
ENSNGAG00000012688	-	100	93.500	ENSPVAG00000016117	-	100	93.500	Pteropus_vampyrus
ENSNGAG00000012688	-	98	78.571	ENSPNYG00000005192	pabpc1a	61	80.838	Pundamilia_nyererei
ENSNGAG00000012688	-	98	77.551	ENSPNYG00000012578	pabpc1b	60	80.874	Pundamilia_nyererei
ENSNGAG00000012688	-	98	78.571	ENSPNAG00000024626	pabpc1b	58	81.967	Pygocentrus_nattereri
ENSNGAG00000012688	-	98	77.041	ENSPNAG00000028408	pabpc1a	64	80.874	Pygocentrus_nattereri
ENSNGAG00000012688	-	99	77.157	ENSRBIG00000028738	-	69	80.874	Rhinopithecus_bieti
ENSNGAG00000012688	-	100	96.500	ENSRBIG00000027173	-	100	96.500	Rhinopithecus_bieti
ENSNGAG00000012688	-	100	96.500	ENSRROG00000017404	-	100	96.500	Rhinopithecus_roxellana
ENSNGAG00000012688	-	98	67.857	ENSSHAG00000000511	-	59	70.492	Sarcophilus_harrisii
ENSNGAG00000012688	-	98	78.571	ENSSFOG00015006662	pabpc1a	58	81.967	Scleropages_formosus
ENSNGAG00000012688	-	87	69.540	ENSSFOG00015019668	-	67	69.540	Scleropages_formosus
ENSNGAG00000012688	-	98	78.571	ENSSFOG00015002752	-	58	81.967	Scleropages_formosus
ENSNGAG00000012688	-	98	78.571	ENSSMAG00000006869	pabpc1b	58	81.421	Scophthalmus_maximus
ENSNGAG00000012688	-	98	78.571	ENSSMAG00000010803	pabpc1a	58	81.967	Scophthalmus_maximus
ENSNGAG00000012688	-	98	78.061	ENSSDUG00000011965	pabpc1b	58	81.421	Seriola_dumerili
ENSNGAG00000012688	-	98	78.571	ENSSDUG00000006675	pabpc1a	58	81.967	Seriola_dumerili
ENSNGAG00000012688	-	98	78.061	ENSSLDG00000014156	pabpc1b	58	81.421	Seriola_lalandi_dorsalis
ENSNGAG00000012688	-	98	78.571	ENSSLDG00000011661	pabpc1a	58	81.967	Seriola_lalandi_dorsalis
ENSNGAG00000012688	-	98	78.571	ENSSPAG00000014453	-	58	81.967	Stegastes_partitus
ENSNGAG00000012688	-	98	78.061	ENSSPAG00000019265	pabpc1b	63	81.421	Stegastes_partitus
ENSNGAG00000012688	-	100	97.000	ENSSSCG00000032167	-	100	97.000	Sus_scrofa
ENSNGAG00000012688	-	100	97.000	ENSSSCG00000036336	-	100	97.000	Sus_scrofa
ENSNGAG00000012688	-	98	79.592	ENSTRUG00000003767	-	59	81.967	Takifugu_rubripes
ENSNGAG00000012688	-	98	78.571	ENSTRUG00000011577	-	58	81.967	Takifugu_rubripes
ENSNGAG00000012688	-	98	74.257	ENSTNIG00000013307	pabpc1a	58	77.249	Tetraodon_nigroviridis
ENSNGAG00000012688	-	98	80.102	ENSTNIG00000009153	pabpc1b	58	82.514	Tetraodon_nigroviridis
ENSNGAG00000012688	-	100	97.000	ENSTTRG00000013181	-	100	97.000	Tursiops_truncatus
ENSNGAG00000012688	-	100	97.000	ENSUAMG00000008089	-	100	97.000	Ursus_americanus
ENSNGAG00000012688	-	99	57.360	ENSUMAG00000023926	-	88	58.152	Ursus_maritimus
ENSNGAG00000012688	-	100	97.000	ENSUMAG00000003364	-	100	97.000	Ursus_maritimus
ENSNGAG00000012688	-	100	96.500	ENSVVUG00000015892	-	97	96.500	Vulpes_vulpes
ENSNGAG00000012688	-	98	79.082	ENSXCOG00000019901	pabpc1b	60	81.967	Xiphophorus_couchianus
ENSNGAG00000012688	-	98	78.571	ENSXCOG00000017066	pabpc1a	61	81.967	Xiphophorus_couchianus
ENSNGAG00000012688	-	98	79.082	ENSXMAG00000003753	pabpc1b	89	81.967	Xiphophorus_maculatus
ENSNGAG00000012688	-	98	78.571	ENSXMAG00000002555	pabpc1a	60	81.967	Xiphophorus_maculatus