EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000013258 (Gene tree)
Gene ID: 103751686
Gene Symbol: Lig4
Alias: 5830471N16Rik|DNA ligase IV|tiny
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 3953 bases
Position: chrKL204869.1:2615937-2619889
Accession: 103751686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000010975	RNA_ligase	PF09414.10	6.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000016517	-	3953	XM_008855196	ENSNGAP00000010975	911 (aa)	XP_008853418	UPI0004ED54B4

Gene Model

Click here to download ENSNGAG00000013258's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000013258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000013258	Lig4	100	87.267	ENSG00000174405	LIG4	100	87.267	Homo_sapiens
ENSNGAG00000013258	Lig4	99	65.055	ENSAPOG00000000866	lig4	99	65.165	Acanthochromis_polyacanthus
ENSNGAG00000013258	Lig4	100	84.413	ENSAMEG00000019685	LIG4	99	84.413	Ailuropoda_melanoleuca
ENSNGAG00000013258	Lig4	99	66.300	ENSACIG00000018309	lig4	99	66.410	Amphilophus_citrinellus
ENSNGAG00000013258	Lig4	99	65.227	ENSAOCG00000011768	lig4	99	65.338	Amphiprion_ocellaris
ENSNGAG00000013258	Lig4	99	65.338	ENSAPEG00000017815	lig4	99	65.449	Amphiprion_percula
ENSNGAG00000013258	Lig4	99	65.632	ENSATEG00000005583	lig4	98	65.632	Anabas_testudineus
ENSNGAG00000013258	Lig4	97	72.841	ENSAPLG00000001673	LIG4	99	72.841	Anas_platyrhynchos
ENSNGAG00000013258	Lig4	99	74.753	ENSACAG00000014566	LIG4	100	74.753	Anolis_carolinensis
ENSNGAG00000013258	Lig4	100	86.718	ENSANAG00000012446	LIG4	100	86.718	Aotus_nancymaae
ENSNGAG00000013258	Lig4	99	65.237	ENSACLG00000027051	lig4	99	65.347	Astatotilapia_calliptera
ENSNGAG00000013258	Lig4	99	64.230	ENSAMXG00000008192	lig4	93	64.230	Astyanax_mexicanus
ENSNGAG00000013258	Lig4	100	86.169	ENSBTAG00000015868	LIG4	100	86.169	Bos_taurus
ENSNGAG00000013258	Lig4	100	85.730	ENSCJAG00000014689	LIG4	100	85.730	Callithrix_jacchus
ENSNGAG00000013258	Lig4	100	85.730	ENSCAFG00000006031	LIG4	100	85.730	Canis_familiaris
ENSNGAG00000013258	Lig4	100	85.730	ENSCAFG00020021230	LIG4	100	85.730	Canis_lupus_dingo
ENSNGAG00000013258	Lig4	100	85.730	ENSCHIG00000001019	LIG4	100	85.730	Capra_hircus
ENSNGAG00000013258	Lig4	99	85.493	ENSCAPG00000006284	LIG4	99	85.493	Cavia_aperea
ENSNGAG00000013258	Lig4	100	85.291	ENSCPOG00000014266	LIG4	100	85.291	Cavia_porcellus
ENSNGAG00000013258	Lig4	100	86.059	ENSCCAG00000019971	LIG4	100	86.059	Cebus_capucinus
ENSNGAG00000013258	Lig4	100	86.828	ENSCATG00000021075	LIG4	100	86.828	Cercocebus_atys
ENSNGAG00000013258	Lig4	100	86.828	ENSCLAG00000003376	LIG4	100	86.828	Chinchilla_lanigera
ENSNGAG00000013258	Lig4	100	87.157	ENSCSAG00000000211	LIG4	100	87.157	Chlorocebus_sabaeus
ENSNGAG00000013258	Lig4	99	77.459	ENSCPBG00000023291	LIG4	99	77.459	Chrysemys_picta_bellii
ENSNGAG00000013258	Lig4	68	45.946	ENSCING00000009536	-	95	45.946	Ciona_intestinalis
ENSNGAG00000013258	Lig4	83	45.932	ENSCSAVG00000010336	-	98	45.932	Ciona_savignyi
ENSNGAG00000013258	Lig4	100	86.937	ENSCANG00000005805	LIG4	100	86.937	Colobus_angolensis_palliatus
ENSNGAG00000013258	Lig4	100	89.364	ENSCGRG00001012072	Lig4	100	89.364	Cricetulus_griseus_chok1gshd
ENSNGAG00000013258	Lig4	100	89.364	ENSCGRG00000013417	Lig4	100	89.364	Cricetulus_griseus_crigri
ENSNGAG00000013258	Lig4	97	65.795	ENSCSEG00000013905	lig4	95	65.795	Cynoglossus_semilaevis
ENSNGAG00000013258	Lig4	99	65.781	ENSCVAG00000007896	lig4	99	65.781	Cyprinodon_variegatus
ENSNGAG00000013258	Lig4	99	63.797	ENSDARG00000060620	lig4	99	63.797	Danio_rerio
ENSNGAG00000013258	Lig4	100	84.978	ENSDNOG00000000513	LIG4	100	84.978	Dasypus_novemcinctus
ENSNGAG00000013258	Lig4	100	86.389	ENSDORG00000027303	Lig4	100	86.389	Dipodomys_ordii
ENSNGAG00000013258	Lig4	90	32.180	FBgn0030506	Lig4	92	32.180	Drosophila_melanogaster
ENSNGAG00000013258	Lig4	99	81.486	ENSETEG00000015563	LIG4	100	81.596	Echinops_telfairi
ENSNGAG00000013258	Lig4	99	43.008	ENSEBUG00000014243	lig4	98	43.008	Eptatretus_burgeri
ENSNGAG00000013258	Lig4	100	86.828	ENSEASG00005022073	LIG4	100	86.828	Equus_asinus_asinus
ENSNGAG00000013258	Lig4	100	86.608	ENSECAG00000003257	LIG4	100	86.608	Equus_caballus
ENSNGAG00000013258	Lig4	99	66.225	ENSELUG00000006787	lig4	99	66.336	Esox_lucius
ENSNGAG00000013258	Lig4	100	85.620	ENSFCAG00000031985	LIG4	100	85.620	Felis_catus
ENSNGAG00000013258	Lig4	88	74.134	ENSFALG00000004214	LIG4	98	74.134	Ficedula_albicollis
ENSNGAG00000013258	Lig4	100	85.840	ENSFDAG00000008973	LIG4	100	85.840	Fukomys_damarensis
ENSNGAG00000013258	Lig4	99	65.006	ENSFHEG00000007398	lig4	89	65.006	Fundulus_heteroclitus
ENSNGAG00000013258	Lig4	85	64.827	ENSGMOG00000012843	lig4	99	64.827	Gadus_morhua
ENSNGAG00000013258	Lig4	100	72.271	ENSGALG00000016854	LIG4	100	72.271	Gallus_gallus
ENSNGAG00000013258	Lig4	99	65.033	ENSGAFG00000019779	lig4	95	65.055	Gambusia_affinis
ENSNGAG00000013258	Lig4	99	63.898	ENSGACG00000014135	lig4	99	64.230	Gasterosteus_aculeatus
ENSNGAG00000013258	Lig4	100	87.047	ENSGGOG00000027771	LIG4	100	87.047	Gorilla_gorilla
ENSNGAG00000013258	Lig4	99	65.017	ENSHBUG00000006245	lig4	99	65.127	Haplochromis_burtoni
ENSNGAG00000013258	Lig4	100	86.169	ENSHGLG00000000718	LIG4	100	86.169	Heterocephalus_glaber_female
ENSNGAG00000013258	Lig4	100	86.169	ENSHGLG00100003265	LIG4	100	86.169	Heterocephalus_glaber_male
ENSNGAG00000013258	Lig4	99	65.055	ENSHCOG00000012010	lig4	99	65.055	Hippocampus_comes
ENSNGAG00000013258	Lig4	99	65.078	ENSIPUG00000013748	lig4	98	65.078	Ictalurus_punctatus
ENSNGAG00000013258	Lig4	100	87.047	ENSSTOG00000024303	LIG4	100	87.047	Ictidomys_tridecemlineatus
ENSNGAG00000013258	Lig4	100	89.352	ENSJJAG00000006750	Lig4	100	89.352	Jaculus_jaculus
ENSNGAG00000013258	Lig4	99	65.559	ENSKMAG00000001149	lig4	99	65.559	Kryptolebias_marmoratus
ENSNGAG00000013258	Lig4	91	65.301	ENSLBEG00000014578	lig4	99	65.422	Labrus_bergylta
ENSNGAG00000013258	Lig4	99	71.460	ENSLACG00000003282	LIG4	99	71.460	Latimeria_chalumnae
ENSNGAG00000013258	Lig4	99	70.309	ENSLOCG00000008901	lig4	97	70.309	Lepisosteus_oculatus
ENSNGAG00000013258	Lig4	100	83.899	ENSLAFG00000031152	LIG4	100	83.899	Loxodonta_africana
ENSNGAG00000013258	Lig4	100	86.937	ENSMFAG00000037235	LIG4	100	86.937	Macaca_fascicularis
ENSNGAG00000013258	Lig4	100	86.937	ENSMMUG00000008874	LIG4	100	86.937	Macaca_mulatta
ENSNGAG00000013258	Lig4	100	86.937	ENSMNEG00000023575	LIG4	100	86.937	Macaca_nemestrina
ENSNGAG00000013258	Lig4	100	86.828	ENSMLEG00000026720	LIG4	100	86.828	Mandrillus_leucophaeus
ENSNGAG00000013258	Lig4	99	66.113	ENSMAMG00000008472	lig4	98	66.224	Mastacembelus_armatus
ENSNGAG00000013258	Lig4	99	65.237	ENSMZEG00005001855	lig4	99	65.347	Maylandia_zebra
ENSNGAG00000013258	Lig4	99	73.216	ENSMGAG00000015532	LIG4	99	73.216	Meleagris_gallopavo
ENSNGAG00000013258	Lig4	100	87.377	ENSMOCG00000019000	Lig4	100	87.377	Microtus_ochrogaster
ENSNGAG00000013258	Lig4	99	63.898	ENSMMOG00000004390	lig4	99	64.009	Mola_mola
ENSNGAG00000013258	Lig4	100	80.900	ENSMODG00000025064	LIG4	100	80.900	Monodelphis_domestica
ENSNGAG00000013258	Lig4	99	65.227	ENSMALG00000008555	lig4	99	65.227	Monopterus_albus
ENSNGAG00000013258	Lig4	100	88.913	MGP_CAROLIEiJ_G0030809	Lig4	100	88.913	Mus_caroli
ENSNGAG00000013258	Lig4	100	88.694	ENSMUSG00000049717	Lig4	100	88.694	Mus_musculus
ENSNGAG00000013258	Lig4	100	88.474	MGP_PahariEiJ_G0021270	Lig4	100	88.474	Mus_pahari
ENSNGAG00000013258	Lig4	100	88.474	MGP_SPRETEiJ_G0031917	Lig4	100	88.474	Mus_spretus
ENSNGAG00000013258	Lig4	100	84.523	ENSMPUG00000018675	LIG4	100	84.523	Mustela_putorius_furo
ENSNGAG00000013258	Lig4	100	86.059	ENSMLUG00000001267	LIG4	100	86.059	Myotis_lucifugus
ENSNGAG00000013258	Lig4	99	65.347	ENSNBRG00000021252	lig4	99	65.457	Neolamprologus_brichardi
ENSNGAG00000013258	Lig4	100	86.937	ENSNLEG00000007888	LIG4	100	86.937	Nomascus_leucogenys
ENSNGAG00000013258	Lig4	100	85.071	ENSOPRG00000005765	LIG4	100	85.071	Ochotona_princeps
ENSNGAG00000013258	Lig4	100	84.303	ENSODEG00000019683	LIG4	100	84.303	Octodon_degus
ENSNGAG00000013258	Lig4	99	65.127	ENSONIG00000011969	lig4	98	65.237	Oreochromis_niloticus
ENSNGAG00000013258	Lig4	100	87.486	ENSOCUG00000015734	LIG4	100	87.486	Oryctolagus_cuniculus
ENSNGAG00000013258	Lig4	99	63.925	ENSORLG00000004041	lig4	99	64.035	Oryzias_latipes
ENSNGAG00000013258	Lig4	99	64.364	ENSORLG00020019607	lig4	99	64.474	Oryzias_latipes_hni
ENSNGAG00000013258	Lig4	99	64.035	ENSORLG00015017754	lig4	99	64.145	Oryzias_latipes_hsok
ENSNGAG00000013258	Lig4	74	69.675	ENSOMEG00000003459	lig4	98	69.675	Oryzias_melastigma
ENSNGAG00000013258	Lig4	100	86.732	ENSOGAG00000032120	LIG4	99	86.732	Otolemur_garnettii
ENSNGAG00000013258	Lig4	82	87.919	ENSOARG00000005590	LIG4	98	87.919	Ovis_aries
ENSNGAG00000013258	Lig4	100	87.047	ENSPPAG00000032998	LIG4	100	87.047	Pan_paniscus
ENSNGAG00000013258	Lig4	100	86.059	ENSPPRG00000017804	LIG4	100	86.059	Panthera_pardus
ENSNGAG00000013258	Lig4	100	86.059	ENSPTIG00000010051	LIG4	100	86.059	Panthera_tigris_altaica
ENSNGAG00000013258	Lig4	100	87.157	ENSPTRG00000006025	LIG4	100	87.157	Pan_troglodytes
ENSNGAG00000013258	Lig4	100	86.937	ENSPANG00000007562	LIG4	100	86.937	Papio_anubis
ENSNGAG00000013258	Lig4	99	65.495	ENSPKIG00000011645	lig4	98	65.495	Paramormyrops_kingsleyae
ENSNGAG00000013258	Lig4	99	77.102	ENSPSIG00000001504	LIG4	99	77.102	Pelodiscus_sinensis
ENSNGAG00000013258	Lig4	99	62.667	ENSPMGG00000013486	lig4	99	62.239	Periophthalmus_magnuspinnatus
ENSNGAG00000013258	Lig4	100	88.487	ENSPEMG00000000076	Lig4	100	88.487	Peromyscus_maniculatus_bairdii
ENSNGAG00000013258	Lig4	100	80.592	ENSPCIG00000021882	LIG4	100	80.592	Phascolarctos_cinereus
ENSNGAG00000013258	Lig4	99	65.072	ENSPFOG00000000797	lig4	99	64.725	Poecilia_formosa
ENSNGAG00000013258	Lig4	99	64.961	ENSPLAG00000001196	lig4	99	64.615	Poecilia_latipinna
ENSNGAG00000013258	Lig4	99	65.072	ENSPMEG00000021353	lig4	99	64.835	Poecilia_mexicana
ENSNGAG00000013258	Lig4	99	64.627	ENSPREG00000007323	lig4	99	64.396	Poecilia_reticulata
ENSNGAG00000013258	Lig4	100	86.608	ENSPPYG00000005540	LIG4	100	86.608	Pongo_abelii
ENSNGAG00000013258	Lig4	100	86.059	ENSPVAG00000016403	LIG4	100	86.059	Pteropus_vampyrus
ENSNGAG00000013258	Lig4	99	65.127	ENSPNYG00000009660	lig4	99	65.237	Pundamilia_nyererei
ENSNGAG00000013258	Lig4	100	64.474	ENSPNAG00000028069	LIG4	100	64.583	Pygocentrus_nattereri
ENSNGAG00000013258	Lig4	100	64.474	ENSPNAG00000028056	lig4	100	64.583	Pygocentrus_nattereri
ENSNGAG00000013258	Lig4	100	87.596	ENSRNOG00000014605	Lig4	100	87.596	Rattus_norvegicus
ENSNGAG00000013258	Lig4	100	85.730	ENSRBIG00000039962	LIG4	100	85.730	Rhinopithecus_bieti
ENSNGAG00000013258	Lig4	100	86.828	ENSRROG00000006040	LIG4	100	86.828	Rhinopithecus_roxellana
ENSNGAG00000013258	Lig4	100	86.169	ENSSBOG00000019029	LIG4	100	86.169	Saimiri_boliviensis_boliviensis
ENSNGAG00000013258	Lig4	100	77.717	ENSSHAG00000009525	LIG4	100	78.180	Sarcophilus_harrisii
ENSNGAG00000013258	Lig4	99	65.642	ENSSFOG00015012835	lig4	99	65.642	Scleropages_formosus
ENSNGAG00000013258	Lig4	99	63.123	ENSSMAG00000011267	lig4	99	63.123	Scophthalmus_maximus
ENSNGAG00000013258	Lig4	99	65.934	ENSSDUG00000010343	lig4	99	65.934	Seriola_dumerili
ENSNGAG00000013258	Lig4	99	63.956	ENSSLDG00000003239	lig4	99	63.956	Seriola_lalandi_dorsalis
ENSNGAG00000013258	Lig4	100	82.713	ENSSARG00000006573	LIG4	100	82.713	Sorex_araneus
ENSNGAG00000013258	Lig4	93	76.066	ENSSPUG00000002444	LIG4	100	76.066	Sphenodon_punctatus
ENSNGAG00000013258	Lig4	99	64.835	ENSSPAG00000001609	lig4	99	64.945	Stegastes_partitus
ENSNGAG00000013258	Lig4	99	85.479	ENSSSCG00000009540	LIG4	99	85.479	Sus_scrofa
ENSNGAG00000013258	Lig4	99	73.077	ENSTGUG00000010795	LIG4	100	73.077	Taeniopygia_guttata
ENSNGAG00000013258	Lig4	99	64.895	ENSTRUG00000009984	lig4	99	64.895	Takifugu_rubripes
ENSNGAG00000013258	Lig4	99	64.835	ENSTNIG00000010348	lig4	99	65.055	Tetraodon_nigroviridis
ENSNGAG00000013258	Lig4	100	87.596	ENSTBEG00000017741	LIG4	100	87.596	Tupaia_belangeri
ENSNGAG00000013258	Lig4	100	85.840	ENSTTRG00000012660	LIG4	100	85.840	Tursiops_truncatus
ENSNGAG00000013258	Lig4	100	84.632	ENSUAMG00000003773	LIG4	100	84.632	Ursus_americanus
ENSNGAG00000013258	Lig4	99	70.374	ENSXETG00000002654	lig4	99	70.374	Xenopus_tropicalis
ENSNGAG00000013258	Lig4	99	64.850	ENSXCOG00000017401	lig4	99	64.725	Xiphophorus_couchianus
ENSNGAG00000013258	Lig4	99	65.000	ENSXMAG00000015142	lig4	99	64.654	Xiphophorus_maculatus