EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000014980 (Gene tree)
Gene ID: 103727712
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 68587 bases
Position: chrKL205487.1:4384129-4452715
Accession: 103727712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000013419	Lactamase_B	PF00753.27	5.4e-10	1	1
ENSNGAP00000013403	Lactamase_B	PF00753.27	6.1e-10	1	1
ENSNGAP00000013413	Lactamase_B	PF00753.27	8.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000018982	-	3032	XM_008825700	ENSNGAP00000013403	385 (aa)	XP_008823922	UPI0004ED6C07
ENSNGAT00000018991	-	1272	-	ENSNGAP00000013413	424 (aa)	-	-
ENSNGAT00000018998	-	2839	XM_008825701	ENSNGAP00000013419	360 (aa)	XP_008823923	UPI0004ED19CE

Gene Model

Click here to download ENSNGAG00000014980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000014980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000014980	Pnkd	72	40.385	ENSNGAG00000015503	Haghl	80	42.544
ENSNGAG00000014980	Pnkd	66	42.437	ENSNGAG00000024100	Hagh	91	42.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000014980	Pnkd	100	96.104	ENSG00000127838	PNKD	100	96.104	Homo_sapiens
ENSNGAG00000014980	Pnkd	90	60.923	ENSAPOG00000019072	pnkd	99	56.303	Acanthochromis_polyacanthus
ENSNGAG00000014980	Pnkd	100	95.584	ENSAMEG00000003089	PNKD	100	95.584	Ailuropoda_melanoleuca
ENSNGAG00000014980	Pnkd	97	54.301	ENSACIG00000015359	pnkd	96	54.301	Amphilophus_citrinellus
ENSNGAG00000014980	Pnkd	85	58.170	ENSAOCG00000024159	pnkd	97	53.550	Amphiprion_ocellaris
ENSNGAG00000014980	Pnkd	90	60.615	ENSAOCG00000011458	-	91	60.615	Amphiprion_ocellaris
ENSNGAG00000014980	Pnkd	90	60.615	ENSAPEG00000011710	pnkd	91	60.615	Amphiprion_percula
ENSNGAG00000014980	Pnkd	90	60.308	ENSATEG00000002727	pnkd	92	60.308	Anabas_testudineus
ENSNGAG00000014980	Pnkd	89	62.187	ENSACAG00000001617	PNKD	99	55.435	Anolis_carolinensis
ENSNGAG00000014980	Pnkd	100	96.104	ENSANAG00000019661	PNKD	100	96.104	Aotus_nancymaae
ENSNGAG00000014980	Pnkd	100	57.500	ENSACLG00000021665	pnkd	91	61.538	Astatotilapia_calliptera
ENSNGAG00000014980	Pnkd	100	59.504	ENSAMXG00000043305	pnkd	90	61.963	Astyanax_mexicanus
ENSNGAG00000014980	Pnkd	100	91.667	ENSBTAG00000003936	PNKD	100	91.667	Bos_taurus
ENSNGAG00000014980	Pnkd	100	96.104	ENSCJAG00000010820	PNKD	100	96.104	Callithrix_jacchus
ENSNGAG00000014980	Pnkd	100	92.987	ENSCAFG00000014632	PNKD	100	92.987	Canis_familiaris
ENSNGAG00000014980	Pnkd	100	91.389	ENSCAFG00020027093	PNKD	100	91.389	Canis_lupus_dingo
ENSNGAG00000014980	Pnkd	100	94.545	ENSCHIG00000002862	PNKD	100	94.545	Capra_hircus
ENSNGAG00000014980	Pnkd	100	95.325	ENSTSYG00000034863	PNKD	100	95.325	Carlito_syrichta
ENSNGAG00000014980	Pnkd	100	96.883	ENSCPOG00000020589	PNKD	100	96.883	Cavia_porcellus
ENSNGAG00000014980	Pnkd	100	95.844	ENSCCAG00000036713	PNKD	100	95.844	Cebus_capucinus
ENSNGAG00000014980	Pnkd	100	96.364	ENSCATG00000041188	PNKD	100	96.364	Cercocebus_atys
ENSNGAG00000014980	Pnkd	100	96.364	ENSCLAG00000012048	PNKD	100	96.364	Chinchilla_lanigera
ENSNGAG00000014980	Pnkd	100	96.364	ENSCSAG00000008892	PNKD	100	96.364	Chlorocebus_sabaeus
ENSNGAG00000014980	Pnkd	100	96.364	ENSCANG00000032283	PNKD	100	96.364	Colobus_angolensis_palliatus
ENSNGAG00000014980	Pnkd	100	97.403	ENSCGRG00001024071	Pnkd	100	97.403	Cricetulus_griseus_chok1gshd
ENSNGAG00000014980	Pnkd	100	95.278	ENSCGRG00000005443	Pnkd	100	95.962	Cricetulus_griseus_crigri
ENSNGAG00000014980	Pnkd	98	55.556	ENSCSEG00000013958	pnkd	99	53.782	Cynoglossus_semilaevis
ENSNGAG00000014980	Pnkd	89	61.755	ENSCVAG00000005723	pnkd	99	55.556	Cyprinodon_variegatus
ENSNGAG00000014980	Pnkd	100	56.906	ENSDARG00000071032	pnkd	100	56.906	Danio_rerio
ENSNGAG00000014980	Pnkd	99	91.086	ENSDNOG00000046154	PNKD	89	90.529	Dasypus_novemcinctus
ENSNGAG00000014980	Pnkd	100	96.382	ENSDORG00000016109	Pnkd	100	96.382	Dipodomys_ordii
ENSNGAG00000014980	Pnkd	100	64.781	ENSETEG00000014587	PNKD	100	64.781	Echinops_telfairi
ENSNGAG00000014980	Pnkd	85	53.746	ENSEBUG00000013857	pnkd	98	53.668	Eptatretus_burgeri
ENSNGAG00000014980	Pnkd	100	91.389	ENSEASG00005012391	PNKD	100	91.389	Equus_asinus_asinus
ENSNGAG00000014980	Pnkd	100	94.026	ENSECAG00000013322	PNKD	100	94.026	Equus_caballus
ENSNGAG00000014980	Pnkd	100	55.163	ENSELUG00000015007	pnkd	91	56.286	Esox_lucius
ENSNGAG00000014980	Pnkd	100	92.500	ENSFCAG00000002373	PNKD	100	92.500	Felis_catus
ENSNGAG00000014980	Pnkd	86	62.783	ENSFALG00000004028	PNKD	97	61.774	Ficedula_albicollis
ENSNGAG00000014980	Pnkd	100	96.364	ENSFDAG00000012326	PNKD	100	96.364	Fukomys_damarensis
ENSNGAG00000014980	Pnkd	100	57.500	ENSFHEG00000010999	pnkd	87	61.231	Fundulus_heteroclitus
ENSNGAG00000014980	Pnkd	100	56.250	ENSGMOG00000009565	pnkd	96	57.267	Gadus_morhua
ENSNGAG00000014980	Pnkd	85	62.418	ENSGALG00000022166	PNKD	98	62.418	Gallus_gallus
ENSNGAG00000014980	Pnkd	89	62.069	ENSGAFG00000013942	pnkd	80	62.069	Gambusia_affinis
ENSNGAG00000014980	Pnkd	99	58.028	ENSGACG00000007119	pnkd	89	62.187	Gasterosteus_aculeatus
ENSNGAG00000014980	Pnkd	87	62.500	ENSGAGG00000017234	PNKD	100	61.635	Gopherus_agassizii
ENSNGAG00000014980	Pnkd	100	96.104	ENSGGOG00000006892	PNKD	100	96.104	Gorilla_gorilla
ENSNGAG00000014980	Pnkd	100	57.500	ENSHBUG00000001234	pnkd	91	61.538	Haplochromis_burtoni
ENSNGAG00000014980	Pnkd	100	95.325	ENSHGLG00000013971	PNKD	100	95.325	Heterocephalus_glaber_female
ENSNGAG00000014980	Pnkd	100	95.325	ENSHGLG00100005225	PNKD	100	95.325	Heterocephalus_glaber_male
ENSNGAG00000014980	Pnkd	99	57.939	ENSHCOG00000018894	pnkd	89	61.875	Hippocampus_comes
ENSNGAG00000014980	Pnkd	100	59.780	ENSIPUG00000013907	pnkd	99	63.844	Ictalurus_punctatus
ENSNGAG00000014980	Pnkd	100	96.883	ENSSTOG00000024593	PNKD	100	96.883	Ictidomys_tridecemlineatus
ENSNGAG00000014980	Pnkd	100	94.545	ENSJJAG00000023559	Pnkd	100	95.584	Jaculus_jaculus
ENSNGAG00000014980	Pnkd	89	61.129	ENSKMAG00000014879	pnkd	89	61.129	Kryptolebias_marmoratus
ENSNGAG00000014980	Pnkd	89	61.442	ENSLBEG00000000985	pnkd	89	61.442	Labrus_bergylta
ENSNGAG00000014980	Pnkd	100	56.749	ENSLOCG00000000821	pnkd	89	61.442	Lepisosteus_oculatus
ENSNGAG00000014980	Pnkd	100	92.217	ENSLAFG00000007427	PNKD	100	92.217	Loxodonta_africana
ENSNGAG00000014980	Pnkd	100	96.364	ENSMFAG00000038281	PNKD	100	96.364	Macaca_fascicularis
ENSNGAG00000014980	Pnkd	50	97.790	ENSMMUG00000022819	-	100	97.790	Macaca_mulatta
ENSNGAG00000014980	Pnkd	100	92.798	ENSMNEG00000041541	PNKD	100	96.497	Macaca_nemestrina
ENSNGAG00000014980	Pnkd	100	96.364	ENSMLEG00000042812	PNKD	100	96.364	Mandrillus_leucophaeus
ENSNGAG00000014980	Pnkd	100	57.500	ENSMAMG00000017212	pnkd	99	56.303	Mastacembelus_armatus
ENSNGAG00000014980	Pnkd	82	62.373	ENSMZEG00005012514	pnkd	100	62.373	Maylandia_zebra
ENSNGAG00000014980	Pnkd	50	51.364	ENSMGAG00000011524	PNKD	100	56.250	Meleagris_gallopavo
ENSNGAG00000014980	Pnkd	100	95.556	ENSMAUG00000013099	Pnkd	100	95.556	Mesocricetus_auratus
ENSNGAG00000014980	Pnkd	100	96.104	ENSMICG00000042547	PNKD	100	96.104	Microcebus_murinus
ENSNGAG00000014980	Pnkd	100	97.668	ENSMOCG00000007956	Pnkd	100	97.668	Microtus_ochrogaster
ENSNGAG00000014980	Pnkd	86	62.136	ENSMMOG00000005679	pnkd	89	62.541	Mola_mola
ENSNGAG00000014980	Pnkd	86	79.100	ENSMODG00000015497	PNKD	97	72.754	Monodelphis_domestica
ENSNGAG00000014980	Pnkd	88	62.893	ENSMALG00000005967	pnkd	80	62.893	Monopterus_albus
ENSNGAG00000014980	Pnkd	100	97.922	MGP_CAROLIEiJ_G0014258	Pnkd	100	97.922	Mus_caroli
ENSNGAG00000014980	Pnkd	100	98.182	ENSMUSG00000026179	Pnkd	100	98.182	Mus_musculus
ENSNGAG00000014980	Pnkd	100	98.182	MGP_PahariEiJ_G0027496	Pnkd	100	98.182	Mus_pahari
ENSNGAG00000014980	Pnkd	100	98.442	MGP_SPRETEiJ_G0015064	Pnkd	100	98.442	Mus_spretus
ENSNGAG00000014980	Pnkd	100	93.056	ENSMPUG00000016531	PNKD	100	93.056	Mustela_putorius_furo
ENSNGAG00000014980	Pnkd	85	94.118	ENSMLUG00000004125	PNKD	100	94.118	Myotis_lucifugus
ENSNGAG00000014980	Pnkd	86	62.338	ENSNBRG00000020031	pnkd	96	62.136	Neolamprologus_brichardi
ENSNGAG00000014980	Pnkd	100	72.987	ENSMEUG00000011266	PNKD	100	72.987	Notamacropus_eugenii
ENSNGAG00000014980	Pnkd	100	95.833	ENSODEG00000009734	PNKD	100	95.833	Octodon_degus
ENSNGAG00000014980	Pnkd	100	56.944	ENSONIG00000004389	pnkd	91	60.923	Oreochromis_niloticus
ENSNGAG00000014980	Pnkd	100	93.160	ENSOCUG00000023754	PNKD	100	93.160	Oryctolagus_cuniculus
ENSNGAG00000014980	Pnkd	90	59.697	ENSORLG00000026276	pnkd	96	55.747	Oryzias_latipes
ENSNGAG00000014980	Pnkd	90	59.697	ENSORLG00020008373	pnkd	97	61.794	Oryzias_latipes_hni
ENSNGAG00000014980	Pnkd	90	60.000	ENSORLG00015005276	pnkd	92	60.000	Oryzias_latipes_hsok
ENSNGAG00000014980	Pnkd	89	60.938	ENSOMEG00000016106	pnkd	97	56.034	Oryzias_melastigma
ENSNGAG00000014980	Pnkd	85	96.405	ENSOGAG00000001792	PNKD	100	96.405	Otolemur_garnettii
ENSNGAG00000014980	Pnkd	100	94.805	ENSOARG00000019505	PNKD	100	94.805	Ovis_aries
ENSNGAG00000014980	Pnkd	100	96.104	ENSPPAG00000034969	PNKD	100	96.104	Pan_paniscus
ENSNGAG00000014980	Pnkd	100	92.500	ENSPPRG00000023720	PNKD	100	92.500	Panthera_pardus
ENSNGAG00000014980	Pnkd	100	88.571	ENSPTIG00000021040	PNKD	100	88.571	Panthera_tigris_altaica
ENSNGAG00000014980	Pnkd	100	95.844	ENSPTRG00000012914	PNKD	100	95.844	Pan_troglodytes
ENSNGAG00000014980	Pnkd	100	96.364	ENSPANG00000005752	PNKD	100	96.364	Papio_anubis
ENSNGAG00000014980	Pnkd	100	57.064	ENSPKIG00000011208	pnkd	100	59.748	Paramormyrops_kingsleyae
ENSNGAG00000014980	Pnkd	85	59.804	ENSPMGG00000005169	pnkd	100	59.804	Periophthalmus_magnuspinnatus
ENSNGAG00000014980	Pnkd	100	97.662	ENSPEMG00000010689	Pnkd	100	97.662	Peromyscus_maniculatus_bairdii
ENSNGAG00000014980	Pnkd	85	54.248	ENSPMAG00000006947	pnkd	99	54.248	Petromyzon_marinus
ENSNGAG00000014980	Pnkd	91	78.963	ENSPCIG00000021457	PNKD	90	78.963	Phascolarctos_cinereus
ENSNGAG00000014980	Pnkd	89	62.187	ENSPFOG00000010628	pnkd	95	58.309	Poecilia_formosa
ENSNGAG00000014980	Pnkd	64	65.217	ENSPLAG00000020583	pnkd	95	59.684	Poecilia_latipinna
ENSNGAG00000014980	Pnkd	74	64.528	ENSPMEG00000006542	pnkd	73	59.722	Poecilia_mexicana
ENSNGAG00000014980	Pnkd	89	61.562	ENSPREG00000014434	pnkd	94	58.284	Poecilia_reticulata
ENSNGAG00000014980	Pnkd	100	96.104	ENSPPYG00000013167	PNKD	100	96.104	Pongo_abelii
ENSNGAG00000014980	Pnkd	100	75.584	ENSPCAG00000003946	PNKD	100	75.584	Procavia_capensis
ENSNGAG00000014980	Pnkd	100	96.364	ENSPCOG00000019839	PNKD	100	96.364	Propithecus_coquereli
ENSNGAG00000014980	Pnkd	88	62.264	ENSPNYG00000016327	pnkd	100	62.264	Pundamilia_nyererei
ENSNGAG00000014980	Pnkd	100	60.165	ENSPNAG00000008655	pnkd	100	59.669	Pygocentrus_nattereri
ENSNGAG00000014980	Pnkd	100	97.922	ENSRNOG00000014806	Pnkd	100	97.922	Rattus_norvegicus
ENSNGAG00000014980	Pnkd	100	96.364	ENSRBIG00000031614	PNKD	100	96.364	Rhinopithecus_bieti
ENSNGAG00000014980	Pnkd	100	96.364	ENSRROG00000045542	PNKD	100	96.364	Rhinopithecus_roxellana
ENSNGAG00000014980	Pnkd	100	95.584	ENSSBOG00000036000	PNKD	100	95.584	Saimiri_boliviensis_boliviensis
ENSNGAG00000014980	Pnkd	88	79.751	ENSSHAG00000016339	PNKD	100	79.751	Sarcophilus_harrisii
ENSNGAG00000014980	Pnkd	90	61.846	ENSSFOG00015013028	pnkd	87	61.846	Scleropages_formosus
ENSNGAG00000014980	Pnkd	90	61.231	ENSSMAG00000006812	pnkd	91	61.231	Scophthalmus_maximus
ENSNGAG00000014980	Pnkd	90	60.308	ENSSDUG00000012538	pnkd	99	55.742	Seriola_dumerili
ENSNGAG00000014980	Pnkd	90	60.308	ENSSLDG00000021431	pnkd	88	60.308	Seriola_lalandi_dorsalis
ENSNGAG00000014980	Pnkd	86	49.196	ENSSPUG00000018454	PNKD	98	52.131	Sphenodon_punctatus
ENSNGAG00000014980	Pnkd	90	60.615	ENSSPAG00000007083	pnkd	91	60.615	Stegastes_partitus
ENSNGAG00000014980	Pnkd	100	95.640	ENSSSCG00000029002	PNKD	100	94.904	Sus_scrofa
ENSNGAG00000014980	Pnkd	89	59.875	ENSTRUG00000009399	pnkd	89	59.875	Takifugu_rubripes
ENSNGAG00000014980	Pnkd	89	60.436	ENSTNIG00000010992	pnkd	90	60.436	Tetraodon_nigroviridis
ENSNGAG00000014980	Pnkd	100	92.987	ENSTTRG00000012895	PNKD	100	92.987	Tursiops_truncatus
ENSNGAG00000014980	Pnkd	100	91.389	ENSUAMG00000000289	PNKD	100	91.389	Ursus_americanus
ENSNGAG00000014980	Pnkd	100	79.221	ENSUMAG00000019639	PNKD	100	79.221	Ursus_maritimus
ENSNGAG00000014980	Pnkd	100	95.065	ENSVVUG00000007348	PNKD	100	95.065	Vulpes_vulpes
ENSNGAG00000014980	Pnkd	86	63.666	ENSXETG00000014931	pnkd	99	64.078	Xenopus_tropicalis
ENSNGAG00000014980	Pnkd	85	62.866	ENSXCOG00000014370	pnkd	94	62.866	Xiphophorus_couchianus