EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000015011 (Gene tree)
Gene ID: 103733322
Gene Symbol: Lsm10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 4313 bases
Position: chrKL200531.1:1234114-1238426
Accession: 103733322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000013436	LSM	PF01423.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000019015	-	816	XM_008832146	ENSNGAP00000013436	123 (aa)	XP_008830368	UPI0004ED6AA8

Gene Model

Click here to download ENSNGAG00000015011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000015011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000015011	Lsm10	55	30.000	ENSNGAG00000003997	Lsm2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000015011	Lsm10	100	91.057	ENSG00000181817	LSM10	100	91.057	Homo_sapiens
ENSNGAG00000015011	Lsm10	100	92.683	ENSAMEG00000019854	LSM10	100	92.683	Ailuropoda_melanoleuca
ENSNGAG00000015011	Lsm10	98	65.000	ENSACIG00000015420	oscp1a	79	65.000	Amphilophus_citrinellus
ENSNGAG00000015011	Lsm10	93	68.696	ENSAOCG00000015618	LSM10	95	68.696	Amphiprion_ocellaris
ENSNGAG00000015011	Lsm10	95	63.248	ENSAOCG00000015607	LSM10	91	63.248	Amphiprion_ocellaris
ENSNGAG00000015011	Lsm10	93	68.696	ENSAOCG00000014654	-	95	68.696	Amphiprion_ocellaris
ENSNGAG00000015011	Lsm10	95	63.248	ENSAPEG00000021851	LSM10	91	63.248	Amphiprion_percula
ENSNGAG00000015011	Lsm10	93	68.696	ENSAPEG00000021845	-	95	68.696	Amphiprion_percula
ENSNGAG00000015011	Lsm10	91	62.500	ENSATEG00000006310	oscp1a	83	62.500	Anabas_testudineus
ENSNGAG00000015011	Lsm10	100	65.854	ENSACAG00000001231	LSM10	100	65.854	Anolis_carolinensis
ENSNGAG00000015011	Lsm10	98	91.667	ENSANAG00000031489	-	98	91.667	Aotus_nancymaae
ENSNGAG00000015011	Lsm10	100	91.870	ENSANAG00000018759	-	100	91.870	Aotus_nancymaae
ENSNGAG00000015011	Lsm10	94	66.379	ENSACLG00000004728	oscp1a	94	66.379	Astatotilapia_calliptera
ENSNGAG00000015011	Lsm10	97	66.387	ENSAMXG00000025301	oscp1a	98	66.387	Astyanax_mexicanus
ENSNGAG00000015011	Lsm10	98	92.500	ENSBTAG00000024096	LSM10	98	92.500	Bos_taurus
ENSNGAG00000015011	Lsm10	100	91.057	ENSCJAG00000044880	LSM10	100	91.057	Callithrix_jacchus
ENSNGAG00000015011	Lsm10	100	94.309	ENSCAFG00000003382	LSM10	100	94.309	Canis_familiaris
ENSNGAG00000015011	Lsm10	100	94.309	ENSCAFG00020008920	LSM10	100	94.309	Canis_lupus_dingo
ENSNGAG00000015011	Lsm10	98	92.500	ENSCHIG00000009398	LSM10	98	92.500	Capra_hircus
ENSNGAG00000015011	Lsm10	100	91.870	ENSCAPG00000012567	LSM10	100	91.870	Cavia_aperea
ENSNGAG00000015011	Lsm10	100	91.870	ENSCPOG00000039302	LSM10	100	91.870	Cavia_porcellus
ENSNGAG00000015011	Lsm10	98	91.667	ENSCCAG00000008378	-	98	91.667	Cebus_capucinus
ENSNGAG00000015011	Lsm10	100	91.870	ENSCCAG00000018913	-	100	91.870	Cebus_capucinus
ENSNGAG00000015011	Lsm10	100	92.683	ENSCATG00000006589	LSM10	100	92.683	Cercocebus_atys
ENSNGAG00000015011	Lsm10	100	93.496	ENSCLAG00000008633	LSM10	100	93.496	Chinchilla_lanigera
ENSNGAG00000015011	Lsm10	100	92.683	ENSCSAG00000000134	LSM10	100	92.683	Chlorocebus_sabaeus
ENSNGAG00000015011	Lsm10	100	92.000	ENSCHOG00000008615	LSM10	100	92.000	Choloepus_hoffmanni
ENSNGAG00000015011	Lsm10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSNGAG00000015011	Lsm10	100	92.683	ENSCANG00000019928	LSM10	100	92.683	Colobus_angolensis_palliatus
ENSNGAG00000015011	Lsm10	93	84.615	ENSCGRG00001022673	-	94	84.615	Cricetulus_griseus_chok1gshd
ENSNGAG00000015011	Lsm10	98	95.041	ENSCGRG00001004317	-	99	95.041	Cricetulus_griseus_chok1gshd
ENSNGAG00000015011	Lsm10	93	84.615	ENSCGRG00000015514	-	94	84.615	Cricetulus_griseus_crigri
ENSNGAG00000015011	Lsm10	98	95.041	ENSCGRG00000014935	-	99	95.041	Cricetulus_griseus_crigri
ENSNGAG00000015011	Lsm10	94	62.931	ENSCSEG00000010374	oscp1a	77	63.478	Cynoglossus_semilaevis
ENSNGAG00000015011	Lsm10	97	63.866	ENSCVAG00000001536	oscp1a	90	63.866	Cyprinodon_variegatus
ENSNGAG00000015011	Lsm10	69	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSNGAG00000015011	Lsm10	98	70.248	ENSDARG00000101222	oscp1a	100	70.248	Danio_rerio
ENSNGAG00000015011	Lsm10	98	95.000	ENSDNOG00000036662	LSM10	98	95.000	Dasypus_novemcinctus
ENSNGAG00000015011	Lsm10	100	94.309	ENSDORG00000007579	Lsm10	100	94.309	Dipodomys_ordii
ENSNGAG00000015011	Lsm10	100	92.683	ENSETEG00000005703	LSM10	100	92.683	Echinops_telfairi
ENSNGAG00000015011	Lsm10	99	50.820	ENSEBUG00000001312	oscp1a	100	50.820	Eptatretus_burgeri
ENSNGAG00000015011	Lsm10	100	94.309	ENSEASG00005012194	LSM10	100	94.309	Equus_asinus_asinus
ENSNGAG00000015011	Lsm10	100	95.122	ENSECAG00000005071	LSM10	100	95.122	Equus_caballus
ENSNGAG00000015011	Lsm10	100	91.870	ENSEEUG00000012032	LSM10	100	91.870	Erinaceus_europaeus
ENSNGAG00000015011	Lsm10	98	66.116	ENSELUG00000007452	oscp1a	99	66.116	Esox_lucius
ENSNGAG00000015011	Lsm10	100	68.293	ENSFALG00000000851	LSM10	100	68.293	Ficedula_albicollis
ENSNGAG00000015011	Lsm10	100	90.244	ENSFDAG00000021056	LSM10	100	90.244	Fukomys_damarensis
ENSNGAG00000015011	Lsm10	89	66.364	ENSFHEG00000001058	oscp1a	95	66.364	Fundulus_heteroclitus
ENSNGAG00000015011	Lsm10	86	66.038	ENSGMOG00000019832	oscp1a	89	66.038	Gadus_morhua
ENSNGAG00000015011	Lsm10	100	71.545	ENSGALG00000002127	LSM10	100	71.545	Gallus_gallus
ENSNGAG00000015011	Lsm10	93	59.322	ENSGAFG00000016445	oscp1a	94	59.322	Gambusia_affinis
ENSNGAG00000015011	Lsm10	94	63.793	ENSGACG00000002329	oscp1a	95	63.793	Gasterosteus_aculeatus
ENSNGAG00000015011	Lsm10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSNGAG00000015011	Lsm10	100	92.683	ENSGGOG00000003556	LSM10	100	92.683	Gorilla_gorilla
ENSNGAG00000015011	Lsm10	94	66.379	ENSHBUG00000001722	oscp1a	94	66.379	Haplochromis_burtoni
ENSNGAG00000015011	Lsm10	100	91.057	ENSHGLG00000011625	LSM10	100	91.057	Heterocephalus_glaber_female
ENSNGAG00000015011	Lsm10	100	91.057	ENSHGLG00100001769	LSM10	100	91.057	Heterocephalus_glaber_male
ENSNGAG00000015011	Lsm10	85	68.571	ENSIPUG00000005808	oscp1a	91	68.571	Ictalurus_punctatus
ENSNGAG00000015011	Lsm10	100	94.309	ENSSTOG00000000606	LSM10	100	94.309	Ictidomys_tridecemlineatus
ENSNGAG00000015011	Lsm10	94	63.793	ENSKMAG00000012143	oscp1a	96	63.793	Kryptolebias_marmoratus
ENSNGAG00000015011	Lsm10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSNGAG00000015011	Lsm10	100	72.358	ENSLACG00000015904	LSM10	95	72.358	Latimeria_chalumnae
ENSNGAG00000015011	Lsm10	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSNGAG00000015011	Lsm10	100	95.935	ENSLAFG00000009600	LSM10	100	95.935	Loxodonta_africana
ENSNGAG00000015011	Lsm10	100	92.683	ENSMFAG00000009115	LSM10	100	92.683	Macaca_fascicularis
ENSNGAG00000015011	Lsm10	100	92.683	ENSMMUG00000017338	LSM10	100	92.683	Macaca_mulatta
ENSNGAG00000015011	Lsm10	100	92.683	ENSMNEG00000020023	LSM10	100	92.683	Macaca_nemestrina
ENSNGAG00000015011	Lsm10	100	92.683	ENSMLEG00000025150	LSM10	100	92.683	Mandrillus_leucophaeus
ENSNGAG00000015011	Lsm10	99	62.295	ENSMAMG00000004427	oscp1a	100	62.295	Mastacembelus_armatus
ENSNGAG00000015011	Lsm10	94	66.379	ENSMZEG00005026307	oscp1a	94	66.379	Maylandia_zebra
ENSNGAG00000015011	Lsm10	100	70.732	ENSMGAG00000015707	LSM10	100	70.732	Meleagris_gallopavo
ENSNGAG00000015011	Lsm10	98	94.215	ENSMAUG00000016624	Lsm10	99	94.215	Mesocricetus_auratus
ENSNGAG00000015011	Lsm10	99	94.262	ENSMOCG00000021943	Lsm10	100	94.262	Microtus_ochrogaster
ENSNGAG00000015011	Lsm10	90	66.667	ENSMMOG00000013597	oscp1a	83	66.667	Mola_mola
ENSNGAG00000015011	Lsm10	100	81.301	ENSMODG00000023328	LSM10	100	81.301	Monodelphis_domestica
ENSNGAG00000015011	Lsm10	56	59.459	ENSMALG00000012661	oscp1a	58	59.459	Monopterus_albus
ENSNGAG00000015011	Lsm10	98	95.041	MGP_CAROLIEiJ_G0026467	Lsm10	100	95.699	Mus_caroli
ENSNGAG00000015011	Lsm10	98	95.868	ENSMUSG00000050188	Lsm10	100	96.774	Mus_musculus
ENSNGAG00000015011	Lsm10	98	95.868	MGP_PahariEiJ_G0028798	Lsm10	100	96.774	Mus_pahari
ENSNGAG00000015011	Lsm10	98	95.868	MGP_SPRETEiJ_G0027446	Lsm10	100	96.774	Mus_spretus
ENSNGAG00000015011	Lsm10	100	94.309	ENSMPUG00000018593	LSM10	100	94.309	Mustela_putorius_furo
ENSNGAG00000015011	Lsm10	100	88.618	ENSMLUG00000023895	LSM10	100	88.618	Myotis_lucifugus
ENSNGAG00000015011	Lsm10	94	67.241	ENSNBRG00000014306	oscp1a	94	67.241	Neolamprologus_brichardi
ENSNGAG00000015011	Lsm10	100	92.683	ENSNLEG00000033754	LSM10	100	92.683	Nomascus_leucogenys
ENSNGAG00000015011	Lsm10	100	81.301	ENSMEUG00000006313	LSM10	100	81.301	Notamacropus_eugenii
ENSNGAG00000015011	Lsm10	100	91.057	ENSOPRG00000001699	LSM10	100	91.057	Ochotona_princeps
ENSNGAG00000015011	Lsm10	100	93.496	ENSODEG00000019161	LSM10	100	93.496	Octodon_degus
ENSNGAG00000015011	Lsm10	94	67.241	ENSONIG00000020904	oscp1a	95	67.241	Oreochromis_niloticus
ENSNGAG00000015011	Lsm10	100	74.797	ENSOANG00000002066	LSM10	100	74.797	Ornithorhynchus_anatinus
ENSNGAG00000015011	Lsm10	100	88.618	ENSOCUG00000005333	LSM10	100	88.618	Oryctolagus_cuniculus
ENSNGAG00000015011	Lsm10	96	64.407	ENSORLG00000009504	oscp1a	98	64.407	Oryzias_latipes
ENSNGAG00000015011	Lsm10	96	64.407	ENSORLG00020016201	oscp1a	98	64.407	Oryzias_latipes_hni
ENSNGAG00000015011	Lsm10	96	64.407	ENSORLG00015007794	oscp1a	97	64.407	Oryzias_latipes_hsok
ENSNGAG00000015011	Lsm10	100	93.496	ENSOGAG00000002653	LSM10	100	93.496	Otolemur_garnettii
ENSNGAG00000015011	Lsm10	98	92.500	ENSOARG00000009596	LSM10	98	92.500	Ovis_aries
ENSNGAG00000015011	Lsm10	100	91.057	ENSPPAG00000023465	LSM10	100	91.057	Pan_paniscus
ENSNGAG00000015011	Lsm10	100	94.309	ENSPPRG00000014619	LSM10	100	94.309	Panthera_pardus
ENSNGAG00000015011	Lsm10	100	94.309	ENSPTIG00000004613	LSM10	100	94.309	Panthera_tigris_altaica
ENSNGAG00000015011	Lsm10	100	91.057	ENSPTRG00000000539	LSM10	100	91.057	Pan_troglodytes
ENSNGAG00000015011	Lsm10	100	92.683	ENSPANG00000023172	LSM10	100	92.683	Papio_anubis
ENSNGAG00000015011	Lsm10	98	64.167	ENSPKIG00000003728	oscp1a	97	64.167	Paramormyrops_kingsleyae
ENSNGAG00000015011	Lsm10	100	70.732	ENSPSIG00000000590	LSM10	100	70.732	Pelodiscus_sinensis
ENSNGAG00000015011	Lsm10	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSNGAG00000015011	Lsm10	84	84.466	ENSPCIG00000014865	LSM10	76	84.466	Phascolarctos_cinereus
ENSNGAG00000015011	Lsm10	91	66.071	ENSPFOG00000020490	oscp1a	95	66.071	Poecilia_formosa
ENSNGAG00000015011	Lsm10	91	66.071	ENSPLAG00000016537	oscp1a	85	66.071	Poecilia_latipinna
ENSNGAG00000015011	Lsm10	88	66.667	ENSPMEG00000000174	oscp1a	94	66.667	Poecilia_mexicana
ENSNGAG00000015011	Lsm10	91	65.179	ENSPREG00000009899	oscp1a	85	65.179	Poecilia_reticulata
ENSNGAG00000015011	Lsm10	100	91.870	ENSPPYG00000001539	LSM10	100	91.870	Pongo_abelii
ENSNGAG00000015011	Lsm10	99	91.803	ENSPCAG00000002520	LSM10	100	91.803	Procavia_capensis
ENSNGAG00000015011	Lsm10	100	89.431	ENSPVAG00000008644	LSM10	100	89.431	Pteropus_vampyrus
ENSNGAG00000015011	Lsm10	94	66.379	ENSPNYG00000003138	oscp1a	94	66.379	Pundamilia_nyererei
ENSNGAG00000015011	Lsm10	96	65.254	ENSPNAG00000028829	oscp1a	98	65.254	Pygocentrus_nattereri
ENSNGAG00000015011	Lsm10	98	96.694	ENSRNOG00000025716	Lsm10	99	96.694	Rattus_norvegicus
ENSNGAG00000015011	Lsm10	100	92.683	ENSRBIG00000001561	LSM10	100	92.683	Rhinopithecus_bieti
ENSNGAG00000015011	Lsm10	100	92.683	ENSRROG00000011414	LSM10	100	92.683	Rhinopithecus_roxellana
ENSNGAG00000015011	Lsm10	100	91.870	ENSSBOG00000036413	-	100	91.870	Saimiri_boliviensis_boliviensis
ENSNGAG00000015011	Lsm10	100	80.488	ENSSHAG00000018056	LSM10	100	80.488	Sarcophilus_harrisii
ENSNGAG00000015011	Lsm10	98	63.636	ENSSFOG00015019954	lsm10	99	63.636	Scleropages_formosus
ENSNGAG00000015011	Lsm10	93	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSNGAG00000015011	Lsm10	94	63.793	ENSSDUG00000007090	oscp1a	94	63.793	Seriola_dumerili
ENSNGAG00000015011	Lsm10	96	63.559	ENSSLDG00000000800	oscp1a	98	63.559	Seriola_lalandi_dorsalis
ENSNGAG00000015011	Lsm10	100	89.600	ENSSARG00000004211	LSM10	100	91.200	Sorex_araneus
ENSNGAG00000015011	Lsm10	94	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSNGAG00000015011	Lsm10	100	90.244	ENSSSCG00000038916	LSM10	100	90.244	Sus_scrofa
ENSNGAG00000015011	Lsm10	98	69.421	ENSTGUG00000001600	-	99	69.421	Taeniopygia_guttata
ENSNGAG00000015011	Lsm10	98	69.421	ENSTGUG00000001602	-	99	69.421	Taeniopygia_guttata
ENSNGAG00000015011	Lsm10	94	66.379	ENSTRUG00000010531	oscp1a	94	66.379	Takifugu_rubripes
ENSNGAG00000015011	Lsm10	100	93.496	ENSTBEG00000016674	LSM10	100	93.496	Tupaia_belangeri
ENSNGAG00000015011	Lsm10	100	91.870	ENSUAMG00000020265	LSM10	100	91.870	Ursus_americanus
ENSNGAG00000015011	Lsm10	100	91.870	ENSUMAG00000001438	LSM10	57	91.870	Ursus_maritimus
ENSNGAG00000015011	Lsm10	100	94.309	ENSVVUG00000023209	LSM10	100	94.309	Vulpes_vulpes
ENSNGAG00000015011	Lsm10	100	68.293	ENSXETG00000027631	lsm10	100	68.293	Xenopus_tropicalis
ENSNGAG00000015011	Lsm10	93	62.609	ENSXCOG00000018776	oscp1a	72	62.609	Xiphophorus_couchianus
ENSNGAG00000015011	Lsm10	95	61.667	ENSXMAG00000019963	oscp1a	96	61.667	Xiphophorus_maculatus