EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000015136 (Gene tree)
Gene ID: 103737067
Gene Symbol: A1cf
Alias: 1810073H04Rik|ACF|apobec-1 complementation factor
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 48585 bases
Position: chrKL201427.1:39978-88562
Accession: 103737067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000013612	DND1_DSRM	PF14709.7	8.3e-26	1	1
ENSNGAP00000013612	RRM_1	PF00076.22	3.6e-40	1	3
ENSNGAP00000013612	RRM_1	PF00076.22	3.6e-40	2	3
ENSNGAP00000013612	RRM_1	PF00076.22	3.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000019192	-	1909	XM_008836751	ENSNGAP00000013612	595 (aa)	XP_008834973	UPI0004ED305A

Gene Model

Click here to download ENSNGAG00000015136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000015136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000015136	A1cf	51	52.751	ENSNGAG00000020647	Syncrip	57	51.385
ENSNGAG00000015136	A1cf	75	58.462	ENSNGAG00000003325	Rbm47	73	58.462
ENSNGAG00000015136	A1cf	53	51.266	ENSNGAG00000013664	-	57	50.949
ENSNGAG00000015136	A1cf	91	72.333	ENSNGAG00000004231	Rbm46	96	72.333
ENSNGAG00000015136	A1cf	53	52.848	ENSNGAG00000018973	-	50	52.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000015136	A1cf	100	94.958	ENSG00000148584	A1CF	100	97.512	Homo_sapiens
ENSNGAG00000015136	A1cf	100	72.803	ENSAPOG00000008259	a1cf	100	72.803	Acanthochromis_polyacanthus
ENSNGAG00000015136	A1cf	100	93.445	ENSAMEG00000000523	A1CF	100	93.782	Ailuropoda_melanoleuca
ENSNGAG00000015136	A1cf	100	75.530	ENSACIG00000008632	a1cf	100	76.835	Amphilophus_citrinellus
ENSNGAG00000015136	A1cf	100	73.486	ENSAOCG00000023744	a1cf	93	85.928	Amphiprion_ocellaris
ENSNGAG00000015136	A1cf	100	74.468	ENSAPEG00000009537	a1cf	100	75.286	Amphiprion_percula
ENSNGAG00000015136	A1cf	100	75.407	ENSATEG00000013720	a1cf	100	76.710	Anabas_testudineus
ENSNGAG00000015136	A1cf	100	88.591	ENSAPLG00000002964	A1CF	100	87.919	Anas_platyrhynchos
ENSNGAG00000015136	A1cf	100	82.215	ENSACAG00000015269	A1CF	100	82.047	Anolis_carolinensis
ENSNGAG00000015136	A1cf	100	93.782	ENSANAG00000019974	A1CF	100	93.782	Aotus_nancymaae
ENSNGAG00000015136	A1cf	100	72.549	ENSACLG00000017428	a1cf	100	74.346	Astatotilapia_calliptera
ENSNGAG00000015136	A1cf	100	73.884	ENSAMXG00000018180	a1cf	100	74.050	Astyanax_mexicanus
ENSNGAG00000015136	A1cf	100	93.109	ENSBTAG00000021195	A1CF	100	93.590	Bos_taurus
ENSNGAG00000015136	A1cf	100	95.462	ENSCJAG00000005045	A1CF	100	95.462	Callithrix_jacchus
ENSNGAG00000015136	A1cf	100	92.941	ENSCAFG00000015581	A1CF	100	93.445	Canis_familiaris
ENSNGAG00000015136	A1cf	100	92.941	ENSCAFG00020026421	A1CF	100	93.445	Canis_lupus_dingo
ENSNGAG00000015136	A1cf	100	93.950	ENSCHIG00000020411	A1CF	100	93.950	Capra_hircus
ENSNGAG00000015136	A1cf	95	93.617	ENSTSYG00000001755	A1CF	100	92.883	Carlito_syrichta
ENSNGAG00000015136	A1cf	100	82.663	ENSCAPG00000017386	A1CF	100	82.663	Cavia_aperea
ENSNGAG00000015136	A1cf	100	94.118	ENSCPOG00000009807	A1CF	100	94.118	Cavia_porcellus
ENSNGAG00000015136	A1cf	100	95.294	ENSCCAG00000018168	A1CF	100	94.790	Cebus_capucinus
ENSNGAG00000015136	A1cf	100	93.445	ENSCATG00000043715	A1CF	100	93.277	Cercocebus_atys
ENSNGAG00000015136	A1cf	100	94.463	ENSCLAG00000010424	A1CF	100	94.463	Chinchilla_lanigera
ENSNGAG00000015136	A1cf	100	94.622	ENSCSAG00000007032	A1CF	100	94.622	Chlorocebus_sabaeus
ENSNGAG00000015136	A1cf	98	89.171	ENSCHOG00000009089	A1CF	98	89.322	Choloepus_hoffmanni
ENSNGAG00000015136	A1cf	100	87.752	ENSCPBG00000026464	A1CF	100	87.416	Chrysemys_picta_bellii
ENSNGAG00000015136	A1cf	100	94.622	ENSCANG00000038032	A1CF	100	94.622	Colobus_angolensis_palliatus
ENSNGAG00000015136	A1cf	100	95.630	ENSCGRG00001017413	A1cf	100	95.630	Cricetulus_griseus_chok1gshd
ENSNGAG00000015136	A1cf	100	94.790	ENSCGRG00000017332	A1cf	100	94.790	Cricetulus_griseus_crigri
ENSNGAG00000015136	A1cf	100	74.295	ENSCSEG00000002361	a1cf	100	75.788	Cynoglossus_semilaevis
ENSNGAG00000015136	A1cf	100	74.430	ENSCVAG00000010520	a1cf	100	76.059	Cyprinodon_variegatus
ENSNGAG00000015136	A1cf	100	78.369	ENSDARG00000002968	a1cf	100	79.867	Danio_rerio
ENSNGAG00000015136	A1cf	100	93.445	ENSDNOG00000002829	A1CF	100	93.445	Dasypus_novemcinctus
ENSNGAG00000015136	A1cf	81	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSNGAG00000015136	A1cf	100	95.142	ENSEASG00005012924	A1CF	100	95.310	Equus_asinus_asinus
ENSNGAG00000015136	A1cf	100	94.640	ENSECAG00000010424	A1CF	100	94.807	Equus_caballus
ENSNGAG00000015136	A1cf	78	79.229	ENSEEUG00000000013	A1CF	97	80.310	Erinaceus_europaeus
ENSNGAG00000015136	A1cf	100	78.536	ENSELUG00000003159	a1cf	100	79.534	Esox_lucius
ENSNGAG00000015136	A1cf	100	91.261	ENSFCAG00000011179	A1CF	100	91.261	Felis_catus
ENSNGAG00000015136	A1cf	100	85.738	ENSFALG00000013183	A1CF	100	85.067	Ficedula_albicollis
ENSNGAG00000015136	A1cf	100	93.109	ENSFDAG00000019371	A1CF	100	93.109	Fukomys_damarensis
ENSNGAG00000015136	A1cf	100	69.870	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSNGAG00000015136	A1cf	100	72.277	ENSGMOG00000018943	a1cf	100	72.277	Gadus_morhua
ENSNGAG00000015136	A1cf	95	87.080	ENSGALG00000003765	A1CF	97	86.372	Gallus_gallus
ENSNGAG00000015136	A1cf	100	70.066	ENSGAFG00000014868	a1cf	100	71.053	Gambusia_affinis
ENSNGAG00000015136	A1cf	100	74.836	ENSGACG00000010241	a1cf	100	75.000	Gasterosteus_aculeatus
ENSNGAG00000015136	A1cf	94	87.211	ENSGAGG00000016508	A1CF	97	86.856	Gopherus_agassizii
ENSNGAG00000015136	A1cf	100	95.126	ENSGGOG00000009670	A1CF	100	95.126	Gorilla_gorilla
ENSNGAG00000015136	A1cf	100	74.062	ENSHBUG00000021959	a1cf	100	76.020	Haplochromis_burtoni
ENSNGAG00000015136	A1cf	100	94.790	ENSHGLG00000008955	A1CF	100	94.790	Heterocephalus_glaber_female
ENSNGAG00000015136	A1cf	100	94.118	ENSHGLG00100000518	A1CF	100	94.118	Heterocephalus_glaber_male
ENSNGAG00000015136	A1cf	100	69.870	ENSHCOG00000017669	a1cf	100	72.358	Hippocampus_comes
ENSNGAG00000015136	A1cf	89	83.054	ENSIPUG00000010367	a1cf	96	83.209	Ictalurus_punctatus
ENSNGAG00000015136	A1cf	100	76.585	ENSKMAG00000006568	a1cf	100	77.561	Kryptolebias_marmoratus
ENSNGAG00000015136	A1cf	99	74.551	ENSLBEG00000020994	a1cf	98	76.026	Labrus_bergylta
ENSNGAG00000015136	A1cf	100	81.302	ENSLACG00000008061	A1CF	100	80.968	Latimeria_chalumnae
ENSNGAG00000015136	A1cf	100	81.667	ENSLOCG00000006302	a1cf	100	81.500	Lepisosteus_oculatus
ENSNGAG00000015136	A1cf	100	94.790	ENSLAFG00000015462	A1CF	100	94.790	Loxodonta_africana
ENSNGAG00000015136	A1cf	100	93.782	ENSMFAG00000035948	A1CF	100	93.613	Macaca_fascicularis
ENSNGAG00000015136	A1cf	100	93.782	ENSMMUG00000007077	A1CF	100	93.613	Macaca_mulatta
ENSNGAG00000015136	A1cf	100	93.445	ENSMNEG00000031454	A1CF	100	93.277	Macaca_nemestrina
ENSNGAG00000015136	A1cf	100	94.790	ENSMLEG00000037223	A1CF	100	94.622	Mandrillus_leucophaeus
ENSNGAG00000015136	A1cf	100	72.995	ENSMAMG00000010402	a1cf	100	75.000	Mastacembelus_armatus
ENSNGAG00000015136	A1cf	100	75.333	ENSMZEG00005013245	a1cf	100	76.333	Maylandia_zebra
ENSNGAG00000015136	A1cf	100	87.437	ENSMGAG00000001507	A1CF	100	86.767	Meleagris_gallopavo
ENSNGAG00000015136	A1cf	100	95.126	ENSMAUG00000007422	A1cf	100	95.126	Mesocricetus_auratus
ENSNGAG00000015136	A1cf	100	92.642	ENSMICG00000003377	A1CF	100	92.642	Microcebus_murinus
ENSNGAG00000015136	A1cf	100	95.126	ENSMOCG00000021536	A1cf	100	95.126	Microtus_ochrogaster
ENSNGAG00000015136	A1cf	100	67.267	ENSMMOG00000009422	a1cf	100	68.412	Mola_mola
ENSNGAG00000015136	A1cf	92	88.483	ENSMODG00000016478	A1CF	97	89.962	Monodelphis_domestica
ENSNGAG00000015136	A1cf	100	72.167	ENSMALG00000012992	a1cf	100	71.833	Monopterus_albus
ENSNGAG00000015136	A1cf	100	94.790	MGP_CAROLIEiJ_G0022873	A1cf	100	94.790	Mus_caroli
ENSNGAG00000015136	A1cf	100	94.790	ENSMUSG00000052595	A1cf	99	96.959	Mus_musculus
ENSNGAG00000015136	A1cf	100	93.950	MGP_PahariEiJ_G0014366	A1cf	100	93.950	Mus_pahari
ENSNGAG00000015136	A1cf	100	94.286	MGP_SPRETEiJ_G0023792	A1cf	100	94.286	Mus_spretus
ENSNGAG00000015136	A1cf	100	87.899	ENSMPUG00000016971	A1CF	100	88.235	Mustela_putorius_furo
ENSNGAG00000015136	A1cf	100	93.277	ENSMLUG00000016071	A1CF	100	93.277	Myotis_lucifugus
ENSNGAG00000015136	A1cf	100	74.388	ENSNBRG00000001712	a1cf	100	76.346	Neolamprologus_brichardi
ENSNGAG00000015136	A1cf	100	95.630	ENSNLEG00000012028	A1CF	100	95.630	Nomascus_leucogenys
ENSNGAG00000015136	A1cf	94	87.922	ENSMEUG00000015909	A1CF	100	87.744	Notamacropus_eugenii
ENSNGAG00000015136	A1cf	88	83.429	ENSOPRG00000010667	A1CF	97	83.208	Ochotona_princeps
ENSNGAG00000015136	A1cf	100	74.715	ENSONIG00000019105	a1cf	100	75.856	Oreochromis_niloticus
ENSNGAG00000015136	A1cf	78	88.651	ENSOANG00000007360	A1CF	99	88.651	Ornithorhynchus_anatinus
ENSNGAG00000015136	A1cf	100	92.282	ENSOCUG00000011587	A1CF	100	92.785	Oryctolagus_cuniculus
ENSNGAG00000015136	A1cf	100	73.693	ENSORLG00000013342	a1cf	100	73.139	Oryzias_latipes
ENSNGAG00000015136	A1cf	100	74.551	ENSORLG00020000586	a1cf	100	74.551	Oryzias_latipes_hni
ENSNGAG00000015136	A1cf	100	74.388	ENSORLG00015018569	a1cf	100	74.388	Oryzias_latipes_hsok
ENSNGAG00000015136	A1cf	100	73.322	ENSOMEG00000013531	a1cf	100	73.322	Oryzias_melastigma
ENSNGAG00000015136	A1cf	100	92.437	ENSOGAG00000012884	A1CF	100	92.773	Otolemur_garnettii
ENSNGAG00000015136	A1cf	100	93.613	ENSOARG00000013695	A1CF	100	93.613	Ovis_aries
ENSNGAG00000015136	A1cf	97	93.414	ENSPPAG00000028115	A1CF	100	97.166	Pan_paniscus
ENSNGAG00000015136	A1cf	100	92.941	ENSPPRG00000012180	A1CF	100	92.941	Panthera_pardus
ENSNGAG00000015136	A1cf	100	92.941	ENSPTIG00000021223	A1CF	100	92.941	Panthera_tigris_altaica
ENSNGAG00000015136	A1cf	100	94.958	ENSPTRG00000002508	A1CF	100	94.958	Pan_troglodytes
ENSNGAG00000015136	A1cf	100	93.782	ENSPANG00000021988	A1CF	100	93.613	Papio_anubis
ENSNGAG00000015136	A1cf	100	80.200	ENSPKIG00000025176	a1cf	100	80.366	Paramormyrops_kingsleyae
ENSNGAG00000015136	A1cf	100	85.403	ENSPSIG00000010318	A1CF	100	85.235	Pelodiscus_sinensis
ENSNGAG00000015136	A1cf	88	71.048	ENSPMGG00000013359	a1cf	99	67.577	Periophthalmus_magnuspinnatus
ENSNGAG00000015136	A1cf	100	95.798	ENSPEMG00000015021	A1cf	100	95.798	Peromyscus_maniculatus_bairdii
ENSNGAG00000015136	A1cf	100	87.584	ENSPCIG00000002175	A1CF	100	87.416	Phascolarctos_cinereus
ENSNGAG00000015136	A1cf	100	75.733	ENSPFOG00000006683	a1cf	100	77.362	Poecilia_formosa
ENSNGAG00000015136	A1cf	100	75.570	ENSPFOG00000007437	-	100	77.199	Poecilia_formosa
ENSNGAG00000015136	A1cf	100	74.430	ENSPLAG00000001210	-	100	76.059	Poecilia_latipinna
ENSNGAG00000015136	A1cf	100	74.430	ENSPLAG00000000026	a1cf	100	76.059	Poecilia_latipinna
ENSNGAG00000015136	A1cf	100	67.157	ENSPMEG00000000921	a1cf	100	68.791	Poecilia_mexicana
ENSNGAG00000015136	A1cf	100	68.301	ENSPMEG00000015529	-	100	69.935	Poecilia_mexicana
ENSNGAG00000015136	A1cf	100	75.733	ENSPREG00000016298	a1cf	100	77.199	Poecilia_reticulata
ENSNGAG00000015136	A1cf	100	94.454	ENSPPYG00000002819	A1CF	100	94.454	Pongo_abelii
ENSNGAG00000015136	A1cf	79	73.150	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSNGAG00000015136	A1cf	100	93.960	ENSPCOG00000024172	A1CF	100	94.295	Propithecus_coquereli
ENSNGAG00000015136	A1cf	100	75.367	ENSPNYG00000017944	a1cf	100	77.325	Pundamilia_nyererei
ENSNGAG00000015136	A1cf	100	79.470	ENSPNAG00000007704	a1cf	100	79.470	Pygocentrus_nattereri
ENSNGAG00000015136	A1cf	100	93.782	ENSRNOG00000033195	A1cf	100	93.782	Rattus_norvegicus
ENSNGAG00000015136	A1cf	100	88.442	ENSRBIG00000042892	A1CF	100	91.781	Rhinopithecus_bieti
ENSNGAG00000015136	A1cf	100	95.126	ENSRROG00000041398	A1CF	100	94.958	Rhinopithecus_roxellana
ENSNGAG00000015136	A1cf	100	95.462	ENSSBOG00000021930	A1CF	100	95.462	Saimiri_boliviensis_boliviensis
ENSNGAG00000015136	A1cf	100	87.919	ENSSHAG00000005096	A1CF	100	87.752	Sarcophilus_harrisii
ENSNGAG00000015136	A1cf	100	78.939	ENSSFOG00015011774	a1cf	100	78.939	Scleropages_formosus
ENSNGAG00000015136	A1cf	100	74.756	ENSSMAG00000013271	a1cf	100	75.244	Scophthalmus_maximus
ENSNGAG00000015136	A1cf	100	75.788	ENSSDUG00000013930	a1cf	100	76.783	Seriola_dumerili
ENSNGAG00000015136	A1cf	100	69.802	ENSSLDG00000004290	a1cf	100	69.637	Seriola_lalandi_dorsalis
ENSNGAG00000015136	A1cf	95	82.509	ENSSARG00000005940	A1CF	96	82.509	Sorex_araneus
ENSNGAG00000015136	A1cf	95	86.995	ENSSPUG00000006797	A1CF	95	86.995	Sphenodon_punctatus
ENSNGAG00000015136	A1cf	100	94.790	ENSSSCG00000010431	A1CF	100	94.790	Sus_scrofa
ENSNGAG00000015136	A1cf	100	87.145	ENSTGUG00000005090	A1CF	100	86.622	Taeniopygia_guttata
ENSNGAG00000015136	A1cf	100	74.388	ENSTRUG00000001982	a1cf	100	74.388	Takifugu_rubripes
ENSNGAG00000015136	A1cf	100	74.959	ENSTNIG00000003580	a1cf	100	74.959	Tetraodon_nigroviridis
ENSNGAG00000015136	A1cf	97	86.308	ENSTTRG00000013190	A1CF	95	86.308	Tursiops_truncatus
ENSNGAG00000015136	A1cf	100	92.437	ENSUAMG00000020065	A1CF	100	92.437	Ursus_americanus
ENSNGAG00000015136	A1cf	100	93.277	ENSUMAG00000011162	A1CF	100	93.445	Ursus_maritimus
ENSNGAG00000015136	A1cf	87	88.676	ENSVPAG00000006130	A1CF	86	88.676	Vicugna_pacos
ENSNGAG00000015136	A1cf	100	92.101	ENSVVUG00000002504	A1CF	100	92.269	Vulpes_vulpes
ENSNGAG00000015136	A1cf	100	78.167	ENSXETG00000006611	a1cf	100	78.000	Xenopus_tropicalis
ENSNGAG00000015136	A1cf	100	75.902	ENSXCOG00000003302	a1cf	100	77.049	Xiphophorus_couchianus
ENSNGAG00000015136	A1cf	100	77.049	ENSXMAG00000016703	a1cf	100	78.197	Xiphophorus_maculatus