EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000015258 (Gene tree)
Gene ID: 103733807
Gene Symbol: Bms1
Alias: Bms1l
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 36557 bases
Position: chrKL200644.1:144155-180711
Accession: 103733807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000013778	AARP2CN	PF08142.12	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000019361	-	3444	XM_008832696	ENSNGAP00000013778	1147 (aa)	XP_008830918	-

Gene Model

Click here to download ENSNGAG00000015258's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000015258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000015258	Bms1	71	67.512	ENSAPOG00000002296	bms1	97	57.760	Acanthochromis_polyacanthus
ENSNGAG00000015258	Bms1	99	81.750	ENSAMEG00000016834	BMS1	95	81.327	Ailuropoda_melanoleuca
ENSNGAG00000015258	Bms1	82	68.344	ENSACIG00000002588	bms1	99	57.108	Amphilophus_citrinellus
ENSNGAG00000015258	Bms1	90	68.226	ENSAOCG00000018088	bms1	99	57.027	Amphiprion_ocellaris
ENSNGAG00000015258	Bms1	87	67.363	ENSAPEG00000014673	bms1	99	56.707	Amphiprion_percula
ENSNGAG00000015258	Bms1	85	68.700	ENSATEG00000023465	bms1	99	56.685	Anabas_testudineus
ENSNGAG00000015258	Bms1	87	72.549	ENSAPLG00000003759	BMS1	100	63.636	Anas_platyrhynchos
ENSNGAG00000015258	Bms1	93	69.517	ENSACAG00000004537	-	87	70.097	Anolis_carolinensis
ENSNGAG00000015258	Bms1	99	81.546	ENSANAG00000023432	BMS1	95	81.572	Aotus_nancymaae
ENSNGAG00000015258	Bms1	97	57.333	ENSACLG00000001294	bms1	99	56.924	Astatotilapia_calliptera
ENSNGAG00000015258	Bms1	84	66.077	ENSAMXG00000011236	bms1	86	65.971	Astyanax_mexicanus
ENSNGAG00000015258	Bms1	99	82.264	ENSBTAG00000012878	BMS1	99	75.625	Bos_taurus
ENSNGAG00000015258	Bms1	85	44.204	WBGene00022021	Y61A9LA.10	97	45.833	Caenorhabditis_elegans
ENSNGAG00000015258	Bms1	99	75.195	ENSCJAG00000021705	BMS1	95	82.064	Callithrix_jacchus
ENSNGAG00000015258	Bms1	99	75.349	ENSCAFG00000007114	BMS1	95	81.373	Canis_familiaris
ENSNGAG00000015258	Bms1	99	75.349	ENSCAFG00020025282	BMS1	95	81.373	Canis_lupus_dingo
ENSNGAG00000015258	Bms1	99	81.990	ENSCHIG00000023251	BMS1	95	81.807	Capra_hircus
ENSNGAG00000015258	Bms1	99	71.395	ENSCAPG00000008652	BMS1	99	70.625	Cavia_aperea
ENSNGAG00000015258	Bms1	99	74.863	ENSCPOG00000000502	BMS1	99	72.755	Cavia_porcellus
ENSNGAG00000015258	Bms1	99	62.392	ENSCCAG00000024969	-	95	71.027	Cebus_capucinus
ENSNGAG00000015258	Bms1	99	75.215	ENSCATG00000030625	-	97	82.288	Cercocebus_atys
ENSNGAG00000015258	Bms1	89	55.943	ENSCATG00000008695	-	97	55.084	Cercocebus_atys
ENSNGAG00000015258	Bms1	99	75.196	ENSCLAG00000002446	BMS1	99	74.178	Chinchilla_lanigera
ENSNGAG00000015258	Bms1	99	75.606	ENSCSAG00000011118	BMS1	97	82.534	Chlorocebus_sabaeus
ENSNGAG00000015258	Bms1	99	80.278	ENSCHOG00000011055	BMS1	99	74.025	Choloepus_hoffmanni
ENSNGAG00000015258	Bms1	99	67.990	ENSCPBG00000025581	BMS1	92	70.388	Chrysemys_picta_bellii
ENSNGAG00000015258	Bms1	83	53.420	ENSCING00000003181	-	99	52.791	Ciona_intestinalis
ENSNGAG00000015258	Bms1	66	53.066	ENSCSAVG00000004113	-	86	60.000	Ciona_savignyi
ENSNGAG00000015258	Bms1	99	75.975	ENSCANG00000011609	BMS1	99	75.625	Colobus_angolensis_palliatus
ENSNGAG00000015258	Bms1	95	88.388	ENSCGRG00001019461	Bms1	99	76.609	Cricetulus_griseus_chok1gshd
ENSNGAG00000015258	Bms1	95	88.388	ENSCGRG00000009016	Bms1	99	76.609	Cricetulus_griseus_crigri
ENSNGAG00000015258	Bms1	83	67.317	ENSCSEG00000002469	bms1	86	68.130	Cynoglossus_semilaevis
ENSNGAG00000015258	Bms1	83	67.702	ENSCVAG00000008371	bms1	99	58.138	Cyprinodon_variegatus
ENSNGAG00000015258	Bms1	86	66.878	ENSDARG00000054154	bms1	99	56.619	Danio_rerio
ENSNGAG00000015258	Bms1	99	74.224	ENSDNOG00000015761	BMS1	97	80.713	Dasypus_novemcinctus
ENSNGAG00000015258	Bms1	84	44.478	FBgn0036686	CG7728	92	45.086	Drosophila_melanogaster
ENSNGAG00000015258	Bms1	80	83.929	ENSETEG00000009554	BMS1	88	83.929	Echinops_telfairi
ENSNGAG00000015258	Bms1	96	85.484	ENSEASG00005006894	BMS1	99	75.881	Equus_asinus_asinus
ENSNGAG00000015258	Bms1	99	75.292	ENSECAG00000001358	BMS1	99	75.411	Equus_caballus
ENSNGAG00000015258	Bms1	85	66.144	ENSELUG00000001756	bms1	89	67.308	Esox_lucius
ENSNGAG00000015258	Bms1	99	82.228	ENSFCAG00000011220	BMS1	95	83.969	Felis_catus
ENSNGAG00000015258	Bms1	99	66.625	ENSFALG00000006882	BMS1	95	66.833	Ficedula_albicollis
ENSNGAG00000015258	Bms1	99	74.176	ENSFDAG00000001422	BMS1	99	73.705	Fukomys_damarensis
ENSNGAG00000015258	Bms1	97	57.513	ENSFHEG00000003367	bms1	99	58.010	Fundulus_heteroclitus
ENSNGAG00000015258	Bms1	99	55.008	ENSGMOG00000000718	bms1	91	65.316	Gadus_morhua
ENSNGAG00000015258	Bms1	99	69.458	ENSGALG00000002624	BMS1	96	72.867	Gallus_gallus
ENSNGAG00000015258	Bms1	84	66.236	ENSGACG00000015334	bms1	84	66.236	Gasterosteus_aculeatus
ENSNGAG00000015258	Bms1	99	65.860	ENSGAGG00000003467	BMS1	99	65.764	Gopherus_agassizii
ENSNGAG00000015258	Bms1	97	57.012	ENSHBUG00000022628	bms1	99	57.177	Haplochromis_burtoni
ENSNGAG00000015258	Bms1	99	74.547	ENSHGLG00000000477	BMS1	99	73.469	Heterocephalus_glaber_female
ENSNGAG00000015258	Bms1	99	74.547	ENSHGLG00100002176	BMS1	99	73.469	Heterocephalus_glaber_male
ENSNGAG00000015258	Bms1	99	57.673	ENSHCOG00000017604	bms1	99	57.752	Hippocampus_comes
ENSNGAG00000015258	Bms1	94	60.081	ENSIPUG00000017855	bms1	99	53.506	Ictalurus_punctatus
ENSNGAG00000015258	Bms1	63	50.314	ENSKMAG00000021982	bms1	51	58.537	Kryptolebias_marmoratus
ENSNGAG00000015258	Bms1	84	67.143	ENSLBEG00000028208	bms1	99	55.929	Labrus_bergylta
ENSNGAG00000015258	Bms1	87	68.146	ENSLOCG00000012914	bms1	99	57.907	Lepisosteus_oculatus
ENSNGAG00000015258	Bms1	99	79.087	ENSLAFG00000006250	BMS1	93	79.797	Loxodonta_africana
ENSNGAG00000015258	Bms1	77	85.633	ENSMFAG00000037771	BMS1	90	86.389	Macaca_fascicularis
ENSNGAG00000015258	Bms1	89	61.719	ENSMMUG00000007426	-	96	72.126	Macaca_mulatta
ENSNGAG00000015258	Bms1	78	64.362	ENSMLEG00000029084	-	91	64.132	Mandrillus_leucophaeus
ENSNGAG00000015258	Bms1	99	56.245	ENSMAMG00000020855	bms1	90	63.757	Mastacembelus_armatus
ENSNGAG00000015258	Bms1	97	57.250	ENSMZEG00005005663	bms1	99	56.924	Maylandia_zebra
ENSNGAG00000015258	Bms1	86	70.845	ENSMGAG00000001170	BMS1	99	63.006	Meleagris_gallopavo
ENSNGAG00000015258	Bms1	96	88.649	ENSMAUG00000002195	Bms1	99	77.708	Mesocricetus_auratus
ENSNGAG00000015258	Bms1	99	74.572	ENSMICG00000009977	BMS1	97	79.607	Microcebus_murinus
ENSNGAG00000015258	Bms1	99	76.641	ENSMOCG00000002038	Bms1	99	81.829	Microtus_ochrogaster
ENSNGAG00000015258	Bms1	84	67.258	ENSMMOG00000000977	bms1	99	56.955	Mola_mola
ENSNGAG00000015258	Bms1	99	72.397	ENSMODG00000001177	BMS1	96	70.803	Monodelphis_domestica
ENSNGAG00000015258	Bms1	89	64.361	ENSMALG00000009680	bms1	99	55.449	Monopterus_albus
ENSNGAG00000015258	Bms1	76	78.450	MGP_CAROLIEiJ_G0028785	-	86	78.261	Mus_caroli
ENSNGAG00000015258	Bms1	96	87.149	ENSMUSG00000030138	Bms1	95	85.406	Mus_musculus
ENSNGAG00000015258	Bms1	96	86.916	MGP_PahariEiJ_G0022539	Bms1	99	75.798	Mus_pahari
ENSNGAG00000015258	Bms1	99	75.604	ENSMPUG00000017276	BMS1	99	76.273	Mustela_putorius_furo
ENSNGAG00000015258	Bms1	99	78.091	ENSMLUG00000003260	BMS1	96	77.981	Myotis_lucifugus
ENSNGAG00000015258	Bms1	99	79.276	ENSNLEG00000015791	BMS1	99	71.440	Nomascus_leucogenys
ENSNGAG00000015258	Bms1	84	87.418	ENSOPRG00000005195	BMS1	81	87.418	Ochotona_princeps
ENSNGAG00000015258	Bms1	99	75.020	ENSODEG00000005554	BMS1	96	81.772	Octodon_degus
ENSNGAG00000015258	Bms1	99	57.352	ENSONIG00000007227	bms1	99	56.672	Oreochromis_niloticus
ENSNGAG00000015258	Bms1	92	73.574	ENSOANG00000000662	-	99	66.589	Ornithorhynchus_anatinus
ENSNGAG00000015258	Bms1	99	75.528	ENSOCUG00000005354	BMS1	99	74.419	Oryctolagus_cuniculus
ENSNGAG00000015258	Bms1	84	67.891	ENSORLG00000014655	bms1	99	58.157	Oryzias_latipes
ENSNGAG00000015258	Bms1	85	68.618	ENSORLG00020016246	bms1	99	58.086	Oryzias_latipes_hni
ENSNGAG00000015258	Bms1	86	69.156	ENSORLG00015014183	bms1	99	58.421	Oryzias_latipes_hsok
ENSNGAG00000015258	Bms1	85	69.481	ENSOMEG00000015042	bms1	99	57.925	Oryzias_melastigma
ENSNGAG00000015258	Bms1	99	75.543	ENSOGAG00000006511	BMS1	98	82.064	Otolemur_garnettii
ENSNGAG00000015258	Bms1	99	82.242	ENSOARG00000003900	BMS1	95	82.054	Ovis_aries
ENSNGAG00000015258	Bms1	99	75.762	ENSPPRG00000001311	BMS1	97	81.381	Panthera_pardus
ENSNGAG00000015258	Bms1	99	79.349	ENSPTIG00000009652	BMS1	99	74.062	Panthera_tigris_altaica
ENSNGAG00000015258	Bms1	96	85.810	ENSPTRG00000002441	BMS1	95	84.391	Pan_troglodytes
ENSNGAG00000015258	Bms1	84	66.240	ENSPKIG00000008165	bms1	88	67.994	Paramormyrops_kingsleyae
ENSNGAG00000015258	Bms1	92	69.764	ENSPSIG00000006481	BMS1	98	64.551	Pelodiscus_sinensis
ENSNGAG00000015258	Bms1	99	76.485	ENSPEMG00000022467	Bms1	99	71.024	Peromyscus_maniculatus_bairdii
ENSNGAG00000015258	Bms1	89	86.441	ENSPCIG00000001339	BMS1	97	86.197	Phascolarctos_cinereus
ENSNGAG00000015258	Bms1	82	66.026	ENSPFOG00000015180	bms1	99	54.454	Poecilia_formosa
ENSNGAG00000015258	Bms1	82	67.264	ENSPMEG00000023176	bms1	94	56.872	Poecilia_mexicana
ENSNGAG00000015258	Bms1	80	67.208	ENSPREG00000002695	bms1	99	56.593	Poecilia_reticulata
ENSNGAG00000015258	Bms1	68	93.197	ENSPCAG00000014528	BMS1	67	93.197	Procavia_capensis
ENSNGAG00000015258	Bms1	95	70.999	ENSPCOG00000023834	-	99	71.023	Propithecus_coquereli
ENSNGAG00000015258	Bms1	81	68.019	ENSPNYG00000018866	bms1	95	68.285	Pundamilia_nyererei
ENSNGAG00000015258	Bms1	85	67.508	ENSPNAG00000000676	bms1	84	69.231	Pygocentrus_nattereri
ENSNGAG00000015258	Bms1	79	72.736	ENSRNOG00000006576	Bms1	94	81.769	Rattus_norvegicus
ENSNGAG00000015258	Bms1	96	85.542	ENSRROG00000040101	BMS1	99	76.307	Rhinopithecus_roxellana
ENSNGAG00000015258	Bms1	77	44.656	YPL217C	-	81	45.155	Saccharomyces_cerevisiae
ENSNGAG00000015258	Bms1	99	71.970	ENSSHAG00000005062	BMS1	91	71.671	Sarcophilus_harrisii
ENSNGAG00000015258	Bms1	99	56.982	ENSSFOG00015022313	bms1	99	55.997	Scleropages_formosus
ENSNGAG00000015258	Bms1	85	67.685	ENSSMAG00000019966	bms1	99	56.295	Scophthalmus_maximus
ENSNGAG00000015258	Bms1	84	68.770	ENSSDUG00000016875	bms1	99	56.300	Seriola_dumerili
ENSNGAG00000015258	Bms1	87	69.094	ENSSLDG00000015199	bms1	99	55.950	Seriola_lalandi_dorsalis
ENSNGAG00000015258	Bms1	67	97.727	ENSSARG00000014407	BMS1	86	97.727	Sorex_araneus
ENSNGAG00000015258	Bms1	99	69.100	ENSSPUG00000014454	BMS1	86	72.346	Sphenodon_punctatus
ENSNGAG00000015258	Bms1	99	82.472	ENSSSCG00000010198	BMS1	95	82.528	Sus_scrofa
ENSNGAG00000015258	Bms1	96	68.329	ENSTGUG00000006302	-	86	71.034	Taeniopygia_guttata
ENSNGAG00000015258	Bms1	81	64.459	ENSTRUG00000008028	bms1	91	64.459	Takifugu_rubripes
ENSNGAG00000015258	Bms1	96	63.780	ENSTNIG00000006216	bms1	80	64.782	Tetraodon_nigroviridis
ENSNGAG00000015258	Bms1	62	90.476	ENSTBEG00000001673	-	64	90.476	Tupaia_belangeri
ENSNGAG00000015258	Bms1	99	74.961	ENSTTRG00000007983	BMS1	95	80.194	Tursiops_truncatus
ENSNGAG00000015258	Bms1	99	81.716	ENSUAMG00000023996	BMS1	95	81.998	Ursus_americanus
ENSNGAG00000015258	Bms1	99	81.592	ENSUMAG00000016523	BMS1	95	81.874	Ursus_maritimus
ENSNGAG00000015258	Bms1	86	75.000	ENSVPAG00000007477	BMS1	96	74.938	Vicugna_pacos
ENSNGAG00000015258	Bms1	99	76.433	ENSVVUG00000021305	BMS1	95	80.982	Vulpes_vulpes
ENSNGAG00000015258	Bms1	97	56.514	ENSXCOG00000000506	bms1	99	57.084	Xiphophorus_couchianus
ENSNGAG00000015258	Bms1	80	66.505	ENSXMAG00000014236	bms1	99	56.500	Xiphophorus_maculatus