EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000015676 (Gene tree)
Gene ID: 103745915
Gene Symbol: Rab42
Alias: 9530096D07Rik|Rab42-ps
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 1644 bases
Position: chrKL203446.1:1386857-1388500
Accession: 103745915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000014340	MMR_HSR1	PF01926.23	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000019929	-	966	XM_008847946	ENSNGAP00000014340	216 (aa)	XP_008846168	UPI0004ED1455

Gene Model

Click here to download ENSNGAG00000015676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000015676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000015676	Rab42	78	41.176	ENSNGAG00000019999	Rab25	77	41.176
ENSNGAG00000015676	Rab42	75	37.805	ENSNGAG00000024103	-	72	36.000
ENSNGAG00000015676	Rab42	70	33.987	ENSNGAG00000023353	Rheb	79	33.987
ENSNGAG00000015676	Rab42	80	31.034	ENSNGAG00000019722	-	66	31.034
ENSNGAG00000015676	Rab42	83	42.473	ENSNGAG00000018930	Rab30	88	42.473
ENSNGAG00000015676	Rab42	96	42.654	ENSNGAG00000015910	Rab1b	98	42.654
ENSNGAG00000015676	Rab42	77	38.690	ENSNGAG00000014566	Rab6a	78	38.690
ENSNGAG00000015676	Rab42	82	41.573	ENSNGAG00000015757	Rab11b	79	41.573
ENSNGAG00000015676	Rab42	81	44.633	ENSNGAG00000005838	Rab1a	83	44.633
ENSNGAG00000015676	Rab42	80	41.243	ENSNGAG00000011436	Rab9b	84	41.243
ENSNGAG00000015676	Rab42	63	30.657	ENSNGAG00000024014	Arl3	70	30.657
ENSNGAG00000015676	Rab42	92	39.196	ENSNGAG00000017091	Rab2b	89	39.196
ENSNGAG00000015676	Rab42	63	38.235	ENSNGAG00000007289	Nras	86	33.529
ENSNGAG00000015676	Rab42	91	37.000	ENSNGAG00000017229	Rab9	96	37.000
ENSNGAG00000015676	Rab42	77	40.116	ENSNGAG00000015807	Rab33b	73	40.116
ENSNGAG00000015676	Rab42	91	36.548	ENSNGAG00000010286	Rab5c	88	36.548
ENSNGAG00000015676	Rab42	80	35.260	ENSNGAG00000018038	Rab23	70	35.260
ENSNGAG00000015676	Rab42	71	31.847	ENSNGAG00000002744	Rab34	59	31.847
ENSNGAG00000015676	Rab42	97	37.674	ENSNGAG00000010962	Rab14	96	37.674
ENSNGAG00000015676	Rab42	81	42.857	ENSNGAG00000013726	Rab11a	78	42.857
ENSNGAG00000015676	Rab42	88	40.526	ENSNGAG00000020764	Rab2a	98	38.318
ENSNGAG00000015676	Rab42	91	30.808	ENSNGAG00000012652	Rab22a	97	30.808
ENSNGAG00000015676	Rab42	96	33.488	ENSNGAG00000005194	Rab7	96	33.488
ENSNGAG00000015676	Rab42	78	37.059	ENSNGAG00000022101	Rab15	77	37.059
ENSNGAG00000015676	Rab42	75	39.634	ENSNGAG00000021245	-	73	39.634
ENSNGAG00000015676	Rab42	63	36.029	ENSNGAG00000000727	Kras	87	31.953
ENSNGAG00000015676	Rab42	96	34.450	ENSNGAG00000020441	Rab6b	94	34.450
ENSNGAG00000015676	Rab42	70	33.766	ENSNGAG00000000037	Rerg	73	33.766
ENSNGAG00000015676	Rab42	80	39.080	ENSNGAG00000010309	Rab13	83	39.080
ENSNGAG00000015676	Rab42	69	35.762	ENSNGAG00000022044	Hras	94	32.065
ENSNGAG00000015676	Rab42	77	35.119	ENSNGAG00000002623	Rab31	83	35.119
ENSNGAG00000015676	Rab42	97	45.622	ENSNGAG00000000596	Rab39b	97	45.622
ENSNGAG00000015676	Rab42	88	38.095	ENSNGAG00000001465	Rab18	88	38.095
ENSNGAG00000015676	Rab42	74	39.024	ENSNGAG00000013169	Rab33a	67	39.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000015676	Rab42	100	82.110	ENSANAG00000035487	-	100	82.110	Aotus_nancymaae
ENSNGAG00000015676	Rab42	100	76.364	ENSBTAG00000021525	-	100	76.364	Bos_taurus
ENSNGAG00000015676	Rab42	98	61.644	ENSCPBG00000011245	RAB42	99	62.150	Chrysemys_picta_bellii
ENSNGAG00000015676	Rab42	100	83.028	ENSCGRG00001019426	Rab42	100	83.028	Cricetulus_griseus_chok1gshd
ENSNGAG00000015676	Rab42	100	77.273	ENSDORG00000023607	Rab42	100	77.273	Dipodomys_ordii
ENSNGAG00000015676	Rab42	100	79.358	ENSFCAG00000037124	-	100	79.358	Felis_catus
ENSNGAG00000015676	Rab42	99	60.648	ENSGAGG00000004921	RAB42	100	60.648	Gopherus_agassizii
ENSNGAG00000015676	Rab42	100	82.110	ENSSTOG00000000084	-	100	82.110	Ictidomys_tridecemlineatus
ENSNGAG00000015676	Rab42	100	84.862	ENSMAUG00000020223	Rab42	100	84.862	Mesocricetus_auratus
ENSNGAG00000015676	Rab42	100	83.028	ENSMICG00000029915	-	100	83.028	Microcebus_murinus
ENSNGAG00000015676	Rab42	100	85.253	ENSMOCG00000021639	Rab42	100	85.253	Microtus_ochrogaster
ENSNGAG00000015676	Rab42	99	64.516	ENSMODG00000023873	-	98	64.516	Monodelphis_domestica
ENSNGAG00000015676	Rab42	100	81.651	ENSOGAG00000006951	-	100	81.651	Otolemur_garnettii
ENSNGAG00000015676	Rab42	97	62.500	ENSPSIG00000006831	RAB42	92	62.500	Pelodiscus_sinensis
ENSNGAG00000015676	Rab42	100	82.569	ENSPCOG00000008605	-	100	82.569	Propithecus_coquereli
ENSNGAG00000015676	Rab42	96	75.238	ENSSARG00000007565	-	100	75.238	Sorex_araneus
ENSNGAG00000015676	Rab42	99	60.829	ENSSPUG00000010337	RAB42	99	60.829	Sphenodon_punctatus
ENSNGAG00000015676	Rab42	100	79.545	ENSSSCG00000030432	-	100	79.545	Sus_scrofa