EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000015897 (Gene tree)
Gene ID: 103734305
Gene Symbol: Zfp560
Alias: 2310030G09Rik
Full Name: zinc finger protein 345
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 7869 bases
Position: chrKL200847.1:168333-176201
Accession: 103734305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	1	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	2	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	3	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	4	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	5	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	6	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	7	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	8	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	9	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	10	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	11	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	12	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	13	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	14	15
ENSNGAP00000014640	zf-C2H2	PF00096.26	4.1e-84	15	15
ENSNGAP00000014640	zf-met	PF12874.7	7.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000020233	-	2247	XM_008833182	ENSNGAP00000014640	748 (aa)	XP_008831404	-

Gene Model

Click here to download ENSNGAG00000015897's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000015897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000015897	Zfp560	69	51.059	ENSNGAG00000010473	-	76	51.059
ENSNGAG00000015897	Zfp560	64	43.243	ENSNGAG00000022025	Zfp423	70	43.243
ENSNGAG00000015897	Zfp560	66	40.698	ENSNGAG00000007174	Ovol2	57	40.698
ENSNGAG00000015897	Zfp560	75	41.176	ENSNGAG00000011056	Zfp236	79	38.732
ENSNGAG00000015897	Zfp560	66	36.634	ENSNGAG00000021506	Rreb1	53	36.634
ENSNGAG00000015897	Zfp560	64	47.191	ENSNGAG00000022234	Wt1	53	45.652
ENSNGAG00000015897	Zfp560	64	35.849	ENSNGAG00000022587	Zfp319	87	36.100
ENSNGAG00000015897	Zfp560	58	57.143	ENSNGAG00000023772	Sall3	64	56.604
ENSNGAG00000015897	Zfp560	87	40.909	ENSNGAG00000018317	Prdm5	89	40.909
ENSNGAG00000015897	Zfp560	65	45.000	ENSNGAG00000016004	Zfp865	80	34.483
ENSNGAG00000015897	Zfp560	91	50.579	ENSNGAG00000016319	Zfp1	99	50.579
ENSNGAG00000015897	Zfp560	92	54.217	ENSNGAG00000011769	Zfp354a	99	54.217
ENSNGAG00000015897	Zfp560	74	37.430	ENSNGAG00000001555	Zfp574	97	38.547
ENSNGAG00000015897	Zfp560	64	53.069	ENSNGAG00000017870	Zfp768	52	52.669
ENSNGAG00000015897	Zfp560	65	44.898	ENSNGAG00000003333	Gfi1b	55	44.898
ENSNGAG00000015897	Zfp560	78	46.353	ENSNGAG00000019853	Zfp39	66	46.353
ENSNGAG00000015897	Zfp560	64	33.333	ENSNGAG00000002579	Zfp646	87	33.333
ENSNGAG00000015897	Zfp560	62	39.773	ENSNGAG00000010268	Patz1	53	30.479
ENSNGAG00000015897	Zfp560	89	51.592	ENSNGAG00000000088	Gm3854	84	51.592
ENSNGAG00000015897	Zfp560	62	42.537	ENSNGAG00000009442	-	52	42.537
ENSNGAG00000015897	Zfp560	62	44.203	ENSNGAG00000020815	Scrt2	75	45.455
ENSNGAG00000015897	Zfp560	93	56.680	ENSNGAG00000014357	Zfp661	99	56.680
ENSNGAG00000015897	Zfp560	63	37.313	ENSNGAG00000011802	Zfp784	72	37.313
ENSNGAG00000015897	Zfp560	91	48.837	ENSNGAG00000016891	Zfp317	91	48.403
ENSNGAG00000015897	Zfp560	94	46.996	ENSNGAG00000016559	-	93	46.996
ENSNGAG00000015897	Zfp560	70	50.490	ENSNGAG00000014809	2610008E11Rik	92	50.490
ENSNGAG00000015897	Zfp560	61	44.340	ENSNGAG00000017185	Snai1	51	44.340
ENSNGAG00000015897	Zfp560	90	50.610	ENSNGAG00000019166	Zfp94	96	50.610
ENSNGAG00000015897	Zfp560	64	57.143	ENSNGAG00000017833	Sall4	53	57.143
ENSNGAG00000015897	Zfp560	64	34.783	ENSNGAG00000018114	Zfp526	83	35.179
ENSNGAG00000015897	Zfp560	95	54.207	ENSNGAG00000020695	Zfp26	89	55.198
ENSNGAG00000015897	Zfp560	64	45.476	ENSNGAG00000012888	Zfp628	53	45.154
ENSNGAG00000015897	Zfp560	67	51.295	ENSNGAG00000020281	Zfp637	83	51.295
ENSNGAG00000015897	Zfp560	64	58.219	ENSNGAG00000024130	-	98	58.219
ENSNGAG00000015897	Zfp560	81	48.062	ENSNGAG00000017654	Zbtb14	66	48.062
ENSNGAG00000015897	Zfp560	91	48.954	ENSNGAG00000015777	Zim1	97	48.954
ENSNGAG00000015897	Zfp560	66	41.315	ENSNGAG00000018331	Zfp64	74	39.617
ENSNGAG00000015897	Zfp560	64	47.407	ENSNGAG00000002549	-	100	47.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000015897	Zfp560	83	89.337	ENSCPOG00000033345	-	100	89.337	Cavia_porcellus
ENSNGAG00000015897	Zfp560	99	80.026	ENSCGRG00001023858	Zfp560	99	80.026	Cricetulus_griseus_chok1gshd
ENSNGAG00000015897	Zfp560	99	80.026	ENSCGRG00000012088	Zfp560	99	80.026	Cricetulus_griseus_crigri
ENSNGAG00000015897	Zfp560	83	89.884	ENSFDAG00000008687	-	100	89.884	Fukomys_damarensis
ENSNGAG00000015897	Zfp560	83	89.884	ENSHGLG00000019054	-	100	89.884	Heterocephalus_glaber_female
ENSNGAG00000015897	Zfp560	89	82.006	ENSHGLG00100015134	-	99	82.006	Heterocephalus_glaber_male
ENSNGAG00000015897	Zfp560	89	82.963	ENSSTOG00000033893	-	99	82.963	Ictidomys_tridecemlineatus
ENSNGAG00000015897	Zfp560	100	73.874	ENSMOCG00000007908	Zfp560	100	73.565	Microtus_ochrogaster
ENSNGAG00000015897	Zfp560	83	89.565	ENSODEG00000017047	-	100	89.565	Octodon_degus
ENSNGAG00000015897	Zfp560	81	79.892	ENSOCUG00000029594	-	99	79.892	Oryctolagus_cuniculus
ENSNGAG00000015897	Zfp560	77	51.070	ENSOGAG00000025131	ZNF121	100	51.070	Otolemur_garnettii
ENSNGAG00000015897	Zfp560	85	82.031	ENSRNOG00000048394	Zfp560	100	82.031	Rattus_norvegicus