EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000016038 (Gene tree)
Gene ID: 103729513
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 1777 bases
Position: chrKL199548.1:1228323-1230099
Accession: 103729513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000014825	RRM_1	PF00076.22	2.9e-18	1	1
ENSNGAP00000014825	RRM_3	PF08777.11	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000020422	-	949	XM_008827597	ENSNGAP00000014825	174 (aa)	XP_008825819	UPI0001C5AB8D

Gene Model

Click here to download ENSNGAG00000016038's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03013	RNA transport	KEGG
ngi03015	mRNA surveillance pathway	KEGG
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000016038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000016038	-	53	35.870	ENSNGAG00000011970	Tia1	53	35.802
ENSNGAG00000016038	-	61	32.000	ENSNGAG00000019590	Elavl1	72	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000016038	-	100	99.425	ENSG00000265241	RBM8A	100	99.425	Homo_sapiens
ENSNGAG00000016038	-	91	92.405	ENSAPOG00000009727	rbm8a	89	92.903	Acanthochromis_polyacanthus
ENSNGAG00000016038	-	100	97.740	ENSAMEG00000017623	RBM8A	100	97.740	Ailuropoda_melanoleuca
ENSNGAG00000016038	-	92	93.125	ENSACIG00000017678	rbm8a	97	93.548	Amphilophus_citrinellus
ENSNGAG00000016038	-	91	92.405	ENSAOCG00000023887	rbm8a	75	92.903	Amphiprion_ocellaris
ENSNGAG00000016038	-	91	92.405	ENSAPEG00000022847	rbm8a	75	92.903	Amphiprion_percula
ENSNGAG00000016038	-	91	92.405	ENSATEG00000005630	rbm8a	89	92.903	Anabas_testudineus
ENSNGAG00000016038	-	100	99.425	ENSANAG00000004525	RBM8A	100	99.425	Aotus_nancymaae
ENSNGAG00000016038	-	91	92.405	ENSACLG00000009627	rbm8a	89	92.903	Astatotilapia_calliptera
ENSNGAG00000016038	-	87	92.715	ENSAMXG00000040754	rbm8a	89	92.903	Astyanax_mexicanus
ENSNGAG00000016038	-	81	55.245	WBGene00004387	rnp-4	83	61.983	Caenorhabditis_elegans
ENSNGAG00000016038	-	100	99.425	ENSCJAG00000046869	RBM8A	100	99.425	Callithrix_jacchus
ENSNGAG00000016038	-	100	99.425	ENSCAFG00000023172	RBM8A	100	99.425	Canis_familiaris
ENSNGAG00000016038	-	100	99.425	ENSCAFG00020019945	RBM8A	100	99.425	Canis_lupus_dingo
ENSNGAG00000016038	-	100	99.425	ENSCHIG00000012114	RBM8A	100	99.425	Capra_hircus
ENSNGAG00000016038	-	100	99.425	ENSTSYG00000028809	RBM8A	100	99.425	Carlito_syrichta
ENSNGAG00000016038	-	72	96.800	ENSCAPG00000014086	RBM8A	100	96.800	Cavia_aperea
ENSNGAG00000016038	-	100	95.977	ENSCPOG00000022453	RBM8A	100	95.977	Cavia_porcellus
ENSNGAG00000016038	-	100	98.851	ENSCCAG00000022460	-	100	98.851	Cebus_capucinus
ENSNGAG00000016038	-	100	99.425	ENSCCAG00000028589	-	100	99.425	Cebus_capucinus
ENSNGAG00000016038	-	100	99.425	ENSCATG00000021691	RBM8A	100	99.425	Cercocebus_atys
ENSNGAG00000016038	-	100	99.425	ENSCLAG00000000547	RBM8A	100	99.425	Chinchilla_lanigera
ENSNGAG00000016038	-	100	99.425	ENSCSAG00000001779	RBM8A	100	99.425	Chlorocebus_sabaeus
ENSNGAG00000016038	-	100	98.851	ENSCPBG00000007941	RBM8A	80	98.851	Chrysemys_picta_bellii
ENSNGAG00000016038	-	91	62.893	ENSCING00000004877	-	91	63.871	Ciona_intestinalis
ENSNGAG00000016038	-	89	64.516	ENSCSAVG00000005685	-	92	64.516	Ciona_savignyi
ENSNGAG00000016038	-	100	99.425	ENSCANG00000042182	RBM8A	100	99.425	Colobus_angolensis_palliatus
ENSNGAG00000016038	-	99	83.237	ENSCGRG00001003032	-	89	83.871	Cricetulus_griseus_chok1gshd
ENSNGAG00000016038	-	100	99.425	ENSCGRG00001002681	-	100	99.425	Cricetulus_griseus_chok1gshd
ENSNGAG00000016038	-	100	99.425	ENSCGRG00000006832	-	100	99.425	Cricetulus_griseus_crigri
ENSNGAG00000016038	-	91	91.772	ENSCSEG00000011865	rbm8a	89	92.258	Cynoglossus_semilaevis
ENSNGAG00000016038	-	91	89.873	ENSCVAG00000020734	rbm8a	88	90.323	Cyprinodon_variegatus
ENSNGAG00000016038	-	89	93.548	ENSDARG00000016516	rbm8a	89	93.548	Danio_rerio
ENSNGAG00000016038	-	52	93.407	ENSDNOG00000025265	-	100	93.407	Dasypus_novemcinctus
ENSNGAG00000016038	-	100	99.425	ENSDORG00000027340	-	100	99.425	Dipodomys_ordii
ENSNGAG00000016038	-	95	63.095	FBgn0033378	tsu	94	64.557	Drosophila_melanogaster
ENSNGAG00000016038	-	89	81.935	ENSETEG00000017932	-	89	81.935	Echinops_telfairi
ENSNGAG00000016038	-	82	93.706	ENSETEG00000008411	-	81	93.706	Echinops_telfairi
ENSNGAG00000016038	-	90	82.051	ENSEBUG00000010386	rbm8a	89	81.935	Eptatretus_burgeri
ENSNGAG00000016038	-	100	99.425	ENSEASG00005007455	RBM8A	100	99.425	Equus_asinus_asinus
ENSNGAG00000016038	-	100	99.425	ENSECAG00000022024	RBM8A	100	99.425	Equus_caballus
ENSNGAG00000016038	-	100	72.989	ENSEEUG00000008823	RBM8A	100	72.989	Erinaceus_europaeus
ENSNGAG00000016038	-	89	92.903	ENSELUG00000012464	rbm8a	89	92.903	Esox_lucius
ENSNGAG00000016038	-	100	98.851	ENSFCAG00000033936	RBM8A	100	98.851	Felis_catus
ENSNGAG00000016038	-	100	99.425	ENSFDAG00000020821	RBM8A	100	99.425	Fukomys_damarensis
ENSNGAG00000016038	-	91	90.506	ENSFHEG00000013538	rbm8a	88	90.968	Fundulus_heteroclitus
ENSNGAG00000016038	-	82	88.732	ENSGMOG00000007353	rbm8a	87	89.209	Gadus_morhua
ENSNGAG00000016038	-	87	84.768	ENSGALG00000036283	RBM8A	88	85.161	Gallus_gallus
ENSNGAG00000016038	-	91	91.139	ENSGAFG00000021698	rbm8a	89	91.613	Gambusia_affinis
ENSNGAG00000016038	-	82	89.437	ENSGACG00000013157	rbm8a	87	90.441	Gasterosteus_aculeatus
ENSNGAG00000016038	-	100	98.851	ENSGAGG00000023769	RBM8A	100	98.851	Gopherus_agassizii
ENSNGAG00000016038	-	100	99.425	ENSGGOG00000037248	RBM8A	100	99.425	Gorilla_gorilla
ENSNGAG00000016038	-	92	92.500	ENSHBUG00000008827	rbm8a	97	92.903	Haplochromis_burtoni
ENSNGAG00000016038	-	100	99.425	ENSHGLG00000007303	RBM8A	100	99.425	Heterocephalus_glaber_female
ENSNGAG00000016038	-	100	99.425	ENSHGLG00100012468	RBM8A	100	99.425	Heterocephalus_glaber_male
ENSNGAG00000016038	-	90	90.385	ENSHCOG00000010122	rbm8a	88	90.323	Hippocampus_comes
ENSNGAG00000016038	-	89	92.258	ENSIPUG00000006525	rbm8a	80	92.258	Ictalurus_punctatus
ENSNGAG00000016038	-	100	98.851	ENSSTOG00000013917	RBM8A	100	98.851	Ictidomys_tridecemlineatus
ENSNGAG00000016038	-	100	99.425	ENSJJAG00000009488	-	100	99.425	Jaculus_jaculus
ENSNGAG00000016038	-	91	89.873	ENSKMAG00000014454	rbm8a	89	90.323	Kryptolebias_marmoratus
ENSNGAG00000016038	-	91	91.772	ENSLBEG00000015720	rbm8a	89	92.258	Labrus_bergylta
ENSNGAG00000016038	-	89	93.631	ENSLACG00000014365	RBM8A	89	93.631	Latimeria_chalumnae
ENSNGAG00000016038	-	89	93.548	ENSLOCG00000009082	rbm8a	89	93.548	Lepisosteus_oculatus
ENSNGAG00000016038	-	100	100.000	ENSLAFG00000021886	-	100	100.000	Loxodonta_africana
ENSNGAG00000016038	-	99	70.056	ENSLAFG00000011031	-	88	67.722	Loxodonta_africana
ENSNGAG00000016038	-	100	99.425	ENSMFAG00000045376	RBM8A	100	99.425	Macaca_fascicularis
ENSNGAG00000016038	-	92	94.611	ENSMMUG00000016051	RBM8A	100	94.611	Macaca_mulatta
ENSNGAG00000016038	-	100	99.425	ENSMNEG00000040422	RBM8A	100	99.425	Macaca_nemestrina
ENSNGAG00000016038	-	100	99.425	ENSMLEG00000039155	RBM8A	100	99.425	Mandrillus_leucophaeus
ENSNGAG00000016038	-	91	89.873	ENSMAMG00000010565	rbm8a	89	90.323	Mastacembelus_armatus
ENSNGAG00000016038	-	91	92.405	ENSMZEG00005016453	rbm8a	89	92.903	Maylandia_zebra
ENSNGAG00000016038	-	100	99.425	ENSMAUG00000016783	-	100	99.425	Mesocricetus_auratus
ENSNGAG00000016038	-	92	76.875	ENSMICG00000037163	-	94	79.085	Microcebus_murinus
ENSNGAG00000016038	-	100	99.425	ENSMICG00000031698	-	100	99.425	Microcebus_murinus
ENSNGAG00000016038	-	100	99.425	ENSMOCG00000017782	-	100	99.425	Microtus_ochrogaster
ENSNGAG00000016038	-	92	79.375	ENSMMOG00000017179	rbm8a	91	79.355	Mola_mola
ENSNGAG00000016038	-	100	98.851	ENSMODG00000018752	RBM8A	100	98.851	Monodelphis_domestica
ENSNGAG00000016038	-	91	90.506	ENSMALG00000010145	rbm8a	89	90.968	Monopterus_albus
ENSNGAG00000016038	-	100	99.425	MGP_CAROLIEiJ_G0025383	Rbm8a	100	99.425	Mus_caroli
ENSNGAG00000016038	-	87	96.026	MGP_CAROLIEiJ_G0014951	Rbm8a2	89	96.129	Mus_caroli
ENSNGAG00000016038	-	100	97.126	ENSMUSG00000078184	Rbm8a2	100	97.126	Mus_musculus
ENSNGAG00000016038	-	100	99.425	ENSMUSG00000038374	Rbm8a	100	99.425	Mus_musculus
ENSNGAG00000016038	-	100	99.425	MGP_PahariEiJ_G0026828	-	100	99.425	Mus_pahari
ENSNGAG00000016038	-	100	99.425	MGP_SPRETEiJ_G0026330	Rbm8a	100	99.425	Mus_spretus
ENSNGAG00000016038	-	100	99.425	ENSMPUG00000000775	RBM8A	100	99.425	Mustela_putorius_furo
ENSNGAG00000016038	-	100	99.425	ENSMLUG00000017436	-	100	99.425	Myotis_lucifugus
ENSNGAG00000016038	-	87	89.404	ENSMLUG00000022711	-	89	89.677	Myotis_lucifugus
ENSNGAG00000016038	-	91	92.405	ENSNBRG00000004541	rbm8a	89	92.903	Neolamprologus_brichardi
ENSNGAG00000016038	-	100	99.425	ENSNLEG00000029632	RBM8A	100	99.425	Nomascus_leucogenys
ENSNGAG00000016038	-	75	96.947	ENSMEUG00000016058	RBM8A	100	96.947	Notamacropus_eugenii
ENSNGAG00000016038	-	66	100.000	ENSOPRG00000013316	RBM8A	100	100.000	Ochotona_princeps
ENSNGAG00000016038	-	87	84.106	ENSODEG00000002094	-	88	84.516	Octodon_degus
ENSNGAG00000016038	-	87	84.768	ENSODEG00000008563	-	89	85.161	Octodon_degus
ENSNGAG00000016038	-	100	99.425	ENSODEG00000000114	-	100	99.425	Octodon_degus
ENSNGAG00000016038	-	91	92.405	ENSONIG00000008608	rbm8a	89	92.903	Oreochromis_niloticus
ENSNGAG00000016038	-	100	97.740	ENSOCUG00000025693	RBM8A	100	97.740	Oryctolagus_cuniculus
ENSNGAG00000016038	-	91	89.241	ENSORLG00000016263	rbm8a	89	89.677	Oryzias_latipes
ENSNGAG00000016038	-	92	89.375	ENSORLG00020012904	rbm8a	82	89.677	Oryzias_latipes_hni
ENSNGAG00000016038	-	91	89.241	ENSORLG00015018824	rbm8a	89	89.677	Oryzias_latipes_hsok
ENSNGAG00000016038	-	91	89.873	ENSOMEG00000021533	rbm8a	69	90.323	Oryzias_melastigma
ENSNGAG00000016038	-	100	97.740	ENSOGAG00000000202	RBM8A	100	97.740	Otolemur_garnettii
ENSNGAG00000016038	-	100	98.851	ENSOARG00000020634	RBM8A	100	98.851	Ovis_aries
ENSNGAG00000016038	-	100	99.425	ENSPPAG00000029116	RBM8A	100	99.425	Pan_paniscus
ENSNGAG00000016038	-	100	98.851	ENSPPRG00000008243	RBM8A	100	98.851	Panthera_pardus
ENSNGAG00000016038	-	100	99.425	ENSPTIG00000009472	RBM8A	100	99.425	Panthera_tigris_altaica
ENSNGAG00000016038	-	100	99.425	ENSPTRG00000001201	RBM8A	100	99.425	Pan_troglodytes
ENSNGAG00000016038	-	100	99.425	ENSPANG00000020584	RBM8A	100	99.425	Papio_anubis
ENSNGAG00000016038	-	90	91.720	ENSPKIG00000009551	rbm8a	66	92.258	Paramormyrops_kingsleyae
ENSNGAG00000016038	-	89	90.323	ENSPKIG00000020558	rbm8a	89	90.323	Paramormyrops_kingsleyae
ENSNGAG00000016038	-	91	92.405	ENSPMGG00000010122	rbm8a	89	92.903	Periophthalmus_magnuspinnatus
ENSNGAG00000016038	-	100	99.425	ENSPEMG00000018117	-	100	99.425	Peromyscus_maniculatus_bairdii
ENSNGAG00000016038	-	100	98.851	ENSPCIG00000011931	RBM8A	100	98.851	Phascolarctos_cinereus
ENSNGAG00000016038	-	91	91.772	ENSPFOG00000010695	rbm8a	89	92.258	Poecilia_formosa
ENSNGAG00000016038	-	91	91.772	ENSPLAG00000009183	rbm8a	89	92.258	Poecilia_latipinna
ENSNGAG00000016038	-	91	91.772	ENSPMEG00000013950	rbm8a	89	92.258	Poecilia_mexicana
ENSNGAG00000016038	-	92	91.250	ENSPREG00000017572	rbm8a	97	91.613	Poecilia_reticulata
ENSNGAG00000016038	-	100	99.425	ENSPPYG00000000929	RBM8A	100	99.425	Pongo_abelii
ENSNGAG00000016038	-	100	99.425	ENSPCAG00000002146	-	100	99.425	Procavia_capensis
ENSNGAG00000016038	-	100	99.425	ENSPCOG00000022886	RBM8A	100	99.425	Propithecus_coquereli
ENSNGAG00000016038	-	100	99.425	ENSPVAG00000014471	RBM8A	100	99.425	Pteropus_vampyrus
ENSNGAG00000016038	-	91	92.405	ENSPNYG00000013564	rbm8a	89	92.903	Pundamilia_nyererei
ENSNGAG00000016038	-	89	94.194	ENSPNAG00000028502	rbm8a	89	94.194	Pygocentrus_nattereri
ENSNGAG00000016038	-	100	99.425	ENSRNOG00000021215	Rbm8a	100	99.425	Rattus_norvegicus
ENSNGAG00000016038	-	100	98.851	ENSRBIG00000039233	RBM8A	100	98.851	Rhinopithecus_bieti
ENSNGAG00000016038	-	87	94.040	ENSRROG00000033023	-	89	93.548	Rhinopithecus_roxellana
ENSNGAG00000016038	-	100	99.425	ENSRROG00000040324	-	100	99.425	Rhinopithecus_roxellana
ENSNGAG00000016038	-	100	99.425	ENSSBOG00000031316	RBM8A	100	99.425	Saimiri_boliviensis_boliviensis
ENSNGAG00000016038	-	100	98.851	ENSSHAG00000018629	RBM8A	100	98.851	Sarcophilus_harrisii
ENSNGAG00000016038	-	89	90.323	ENSSFOG00015024171	rbm8a	89	90.323	Scleropages_formosus
ENSNGAG00000016038	-	89	93.548	ENSSFOG00015009007	rbm8a	89	93.548	Scleropages_formosus
ENSNGAG00000016038	-	91	91.139	ENSSMAG00000012998	rbm8a	89	91.613	Scophthalmus_maximus
ENSNGAG00000016038	-	91	92.405	ENSSDUG00000005911	rbm8a	89	92.903	Seriola_dumerili
ENSNGAG00000016038	-	91	92.405	ENSSLDG00000011664	rbm8a	89	92.903	Seriola_lalandi_dorsalis
ENSNGAG00000016038	-	100	99.425	ENSSARG00000013289	RBM8A	100	99.425	Sorex_araneus
ENSNGAG00000016038	-	100	98.276	ENSSPUG00000001576	RBM8A	100	98.276	Sphenodon_punctatus
ENSNGAG00000016038	-	91	92.405	ENSSPAG00000012181	rbm8a	89	92.903	Stegastes_partitus
ENSNGAG00000016038	-	100	99.425	ENSSSCG00000028509	RBM8A	100	99.425	Sus_scrofa
ENSNGAG00000016038	-	87	95.364	ENSTGUG00000004447	RBM8A	89	95.484	Taeniopygia_guttata
ENSNGAG00000016038	-	91	89.241	ENSTRUG00000013173	rbm8a	88	89.677	Takifugu_rubripes
ENSNGAG00000016038	-	91	89.873	ENSTNIG00000006869	rbm8a	89	90.323	Tetraodon_nigroviridis
ENSNGAG00000016038	-	66	100.000	ENSTBEG00000014947	RBM8A	100	100.000	Tupaia_belangeri
ENSNGAG00000016038	-	87	99.338	ENSTTRG00000009081	RBM8A	100	99.338	Tursiops_truncatus
ENSNGAG00000016038	-	100	99.425	ENSUAMG00000021929	RBM8A	100	99.425	Ursus_americanus
ENSNGAG00000016038	-	100	99.425	ENSUMAG00000010298	RBM8A	100	99.425	Ursus_maritimus
ENSNGAG00000016038	-	100	99.425	ENSVVUG00000007486	RBM8A	100	99.425	Vulpes_vulpes
ENSNGAG00000016038	-	91	91.139	ENSXCOG00000004369	rbm8a	89	91.613	Xiphophorus_couchianus
ENSNGAG00000016038	-	91	91.139	ENSXMAG00000013463	rbm8a	97	90.323	Xiphophorus_maculatus