EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000016337 (Gene tree)
Gene ID: 103742657
Gene Symbol: Sf3b4
Alias: 49kDa|SF3b49|Sap49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 5459 bases
Position: chrKL202696.1:368643-374101
Accession: 103742657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000015262	RRM_1	PF00076.22	2.8e-39	1	2
ENSNGAP00000015262	RRM_1	PF00076.22	2.8e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000020865	-	1642	XM_008843730	ENSNGAP00000015262	424 (aa)	XP_008841952	-

Gene Model

Click here to download ENSNGAG00000016337's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000016337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000016337	Sf3b4	56	37.241	ENSNGAG00000023773	-	64	35.359
ENSNGAG00000016337	Sf3b4	70	39.344	ENSNGAG00000000996	Pabpc1	57	39.344
ENSNGAG00000016337	Sf3b4	54	35.593	ENSNGAG00000010458	Pabpc1l	60	35.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000016337	Sf3b4	100	99.292	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSNGAG00000016337	Sf3b4	57	96.667	ENSAPOG00000017647	sf3b4	77	82.132	Acanthochromis_polyacanthus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSAMEG00000010073	SF3B4	100	99.528	Ailuropoda_melanoleuca
ENSNGAG00000016337	Sf3b4	57	96.667	ENSAOCG00000019801	sf3b4	77	82.132	Amphiprion_ocellaris
ENSNGAG00000016337	Sf3b4	57	96.667	ENSAPEG00000010365	sf3b4	77	82.132	Amphiprion_percula
ENSNGAG00000016337	Sf3b4	57	96.250	ENSATEG00000012844	sf3b4	76	80.312	Anabas_testudineus
ENSNGAG00000016337	Sf3b4	62	96.198	ENSACAG00000010019	SF3B4	90	91.123	Anolis_carolinensis
ENSNGAG00000016337	Sf3b4	100	99.292	ENSANAG00000031025	SF3B4	100	99.292	Aotus_nancymaae
ENSNGAG00000016337	Sf3b4	57	95.833	ENSACLG00000014260	sf3b4	76	81.191	Astatotilapia_calliptera
ENSNGAG00000016337	Sf3b4	57	96.250	ENSAMXG00000008282	sf3b4	77	80.878	Astyanax_mexicanus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSBTAG00000012495	SF3B4	100	99.528	Bos_taurus
ENSNGAG00000016337	Sf3b4	84	98.039	ENSBTAG00000012793	-	88	98.039	Bos_taurus
ENSNGAG00000016337	Sf3b4	90	81.443	ENSCJAG00000042351	SF3B4	87	81.443	Callithrix_jacchus
ENSNGAG00000016337	Sf3b4	100	99.057	ENSCAFG00000011617	SF3B4	100	99.057	Canis_familiaris
ENSNGAG00000016337	Sf3b4	100	99.057	ENSCAFG00020019775	SF3B4	100	99.057	Canis_lupus_dingo
ENSNGAG00000016337	Sf3b4	100	99.528	ENSCHIG00000025663	-	100	99.528	Capra_hircus
ENSNGAG00000016337	Sf3b4	100	99.292	ENSTSYG00000009295	SF3B4	100	99.292	Carlito_syrichta
ENSNGAG00000016337	Sf3b4	100	99.292	ENSCPOG00000008267	SF3B4	100	99.292	Cavia_porcellus
ENSNGAG00000016337	Sf3b4	95	85.323	ENSCCAG00000019823	-	77	86.196	Cebus_capucinus
ENSNGAG00000016337	Sf3b4	100	86.768	ENSCCAG00000021751	-	69	93.210	Cebus_capucinus
ENSNGAG00000016337	Sf3b4	100	99.292	ENSCATG00000033114	SF3B4	100	99.292	Cercocebus_atys
ENSNGAG00000016337	Sf3b4	100	99.292	ENSCLAG00000015851	SF3B4	100	99.292	Chinchilla_lanigera
ENSNGAG00000016337	Sf3b4	100	99.292	ENSCSAG00000018129	SF3B4	100	99.292	Chlorocebus_sabaeus
ENSNGAG00000016337	Sf3b4	99	83.726	ENSCPBG00000008041	SF3B4	91	91.406	Chrysemys_picta_bellii
ENSNGAG00000016337	Sf3b4	51	90.698	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSNGAG00000016337	Sf3b4	100	99.292	ENSCANG00000035579	SF3B4	100	99.292	Colobus_angolensis_palliatus
ENSNGAG00000016337	Sf3b4	100	99.764	ENSCGRG00001003590	Sf3b4	100	99.764	Cricetulus_griseus_chok1gshd
ENSNGAG00000016337	Sf3b4	100	99.764	ENSCGRG00000016914	Sf3b4	100	99.764	Cricetulus_griseus_crigri
ENSNGAG00000016337	Sf3b4	57	96.250	ENSDARG00000018574	sf3b4	77	81.505	Danio_rerio
ENSNGAG00000016337	Sf3b4	97	80.630	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSNGAG00000016337	Sf3b4	98	96.635	ENSDNOG00000048908	-	99	96.635	Dasypus_novemcinctus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSDORG00000016366	Sf3b4	100	99.528	Dipodomys_ordii
ENSNGAG00000016337	Sf3b4	52	86.425	FBgn0015818	Spx	61	88.152	Drosophila_melanogaster
ENSNGAG00000016337	Sf3b4	76	92.284	ENSETEG00000008963	SF3B4	76	92.284	Echinops_telfairi
ENSNGAG00000016337	Sf3b4	100	99.528	ENSEASG00005001477	SF3B4	100	99.528	Equus_asinus_asinus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSECAG00000024737	SF3B4	100	99.528	Equus_caballus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSFCAG00000010106	SF3B4	100	99.528	Felis_catus
ENSNGAG00000016337	Sf3b4	100	99.292	ENSFDAG00000009286	SF3B4	100	99.292	Fukomys_damarensis
ENSNGAG00000016337	Sf3b4	54	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSNGAG00000016337	Sf3b4	99	87.943	ENSGALG00000013352	SF3B4	90	90.601	Gallus_gallus
ENSNGAG00000016337	Sf3b4	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSNGAG00000016337	Sf3b4	99	83.491	ENSGAGG00000025055	SF3B4	79	91.146	Gopherus_agassizii
ENSNGAG00000016337	Sf3b4	100	73.113	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSNGAG00000016337	Sf3b4	100	99.292	ENSGGOG00000004761	SF3B4	100	99.292	Gorilla_gorilla
ENSNGAG00000016337	Sf3b4	57	95.833	ENSHBUG00000002028	sf3b4	76	81.191	Haplochromis_burtoni
ENSNGAG00000016337	Sf3b4	100	99.292	ENSHGLG00000012360	SF3B4	100	99.292	Heterocephalus_glaber_female
ENSNGAG00000016337	Sf3b4	100	98.349	ENSHGLG00100008533	SF3B4	100	98.349	Heterocephalus_glaber_male
ENSNGAG00000016337	Sf3b4	50	99.531	ENSHCOG00000003014	sf3b4	57	96.491	Hippocampus_comes
ENSNGAG00000016337	Sf3b4	57	96.667	ENSIPUG00000012242	Sf3b4	77	82.132	Ictalurus_punctatus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSSTOG00000000684	-	100	99.528	Ictidomys_tridecemlineatus
ENSNGAG00000016337	Sf3b4	76	84.483	ENSJJAG00000022500	Sf3b4	95	84.483	Jaculus_jaculus
ENSNGAG00000016337	Sf3b4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSNGAG00000016337	Sf3b4	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSNGAG00000016337	Sf3b4	57	95.473	ENSLACG00000004436	SF3B4	87	86.562	Latimeria_chalumnae
ENSNGAG00000016337	Sf3b4	57	95.885	ENSLOCG00000009048	sf3b4	75	86.834	Lepisosteus_oculatus
ENSNGAG00000016337	Sf3b4	100	99.529	ENSLAFG00000008531	SF3B4	100	99.529	Loxodonta_africana
ENSNGAG00000016337	Sf3b4	92	71.066	ENSMFAG00000039067	-	57	80.841	Macaca_fascicularis
ENSNGAG00000016337	Sf3b4	100	99.292	ENSMFAG00000042395	SF3B4	100	99.292	Macaca_fascicularis
ENSNGAG00000016337	Sf3b4	100	99.292	ENSMMUG00000007256	SF3B4	100	99.292	Macaca_mulatta
ENSNGAG00000016337	Sf3b4	92	70.558	ENSMNEG00000031526	-	57	80.374	Macaca_nemestrina
ENSNGAG00000016337	Sf3b4	100	99.292	ENSMNEG00000031839	SF3B4	100	99.292	Macaca_nemestrina
ENSNGAG00000016337	Sf3b4	100	99.292	ENSMLEG00000038667	SF3B4	100	99.292	Mandrillus_leucophaeus
ENSNGAG00000016337	Sf3b4	57	97.083	ENSMAMG00000014692	sf3b4	77	81.818	Mastacembelus_armatus
ENSNGAG00000016337	Sf3b4	57	95.833	ENSMZEG00005026741	sf3b4	76	81.191	Maylandia_zebra
ENSNGAG00000016337	Sf3b4	99	87.234	ENSMGAG00000000653	SF3B4	91	89.034	Meleagris_gallopavo
ENSNGAG00000016337	Sf3b4	100	99.764	ENSMAUG00000015266	Sf3b4	100	99.764	Mesocricetus_auratus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSMICG00000044961	SF3B4	100	99.528	Microcebus_murinus
ENSNGAG00000016337	Sf3b4	98	94.699	ENSMOCG00000014155	-	100	94.699	Microtus_ochrogaster
ENSNGAG00000016337	Sf3b4	100	99.528	ENSMOCG00000013658	-	100	99.528	Microtus_ochrogaster
ENSNGAG00000016337	Sf3b4	54	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSNGAG00000016337	Sf3b4	100	98.821	ENSMODG00000018767	SF3B4	100	98.821	Monodelphis_domestica
ENSNGAG00000016337	Sf3b4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSNGAG00000016337	Sf3b4	100	99.528	MGP_CAROLIEiJ_G0025365	Sf3b4	100	99.528	Mus_caroli
ENSNGAG00000016337	Sf3b4	100	99.764	ENSMUSG00000068856	Sf3b4	100	99.764	Mus_musculus
ENSNGAG00000016337	Sf3b4	100	99.764	MGP_PahariEiJ_G0026809	Sf3b4	100	99.764	Mus_pahari
ENSNGAG00000016337	Sf3b4	100	99.764	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.764	Mus_spretus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSMPUG00000005563	SF3B4	100	99.528	Mustela_putorius_furo
ENSNGAG00000016337	Sf3b4	100	99.292	ENSMLUG00000010789	SF3B4	100	99.292	Myotis_lucifugus
ENSNGAG00000016337	Sf3b4	57	96.250	ENSNBRG00000013865	sf3b4	76	81.505	Neolamprologus_brichardi
ENSNGAG00000016337	Sf3b4	100	76.179	ENSNLEG00000000537	-	82	84.259	Nomascus_leucogenys
ENSNGAG00000016337	Sf3b4	100	69.626	ENSNLEG00000009693	-	100	69.626	Nomascus_leucogenys
ENSNGAG00000016337	Sf3b4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSNGAG00000016337	Sf3b4	99	97.387	ENSOPRG00000010808	SF3B4	99	97.387	Ochotona_princeps
ENSNGAG00000016337	Sf3b4	75	86.435	ENSODEG00000003597	-	79	86.435	Octodon_degus
ENSNGAG00000016337	Sf3b4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSNGAG00000016337	Sf3b4	99	58.140	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSOCUG00000004614	SF3B4	100	99.528	Oryctolagus_cuniculus
ENSNGAG00000016337	Sf3b4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSNGAG00000016337	Sf3b4	100	99.528	ENSOGAG00000006265	SF3B4	100	99.528	Otolemur_garnettii
ENSNGAG00000016337	Sf3b4	100	99.528	ENSOARG00000020718	-	100	99.528	Ovis_aries
ENSNGAG00000016337	Sf3b4	86	78.297	ENSOARG00000007368	-	55	83.482	Ovis_aries
ENSNGAG00000016337	Sf3b4	100	81.368	ENSPPAG00000030024	-	78	82.099	Pan_paniscus
ENSNGAG00000016337	Sf3b4	100	99.292	ENSPPAG00000040904	SF3B4	100	99.292	Pan_paniscus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSPPRG00000007384	SF3B4	100	99.528	Panthera_pardus
ENSNGAG00000016337	Sf3b4	100	99.057	ENSPTIG00000014530	SF3B4	100	99.057	Panthera_tigris_altaica
ENSNGAG00000016337	Sf3b4	100	99.292	ENSPTRG00000001243	SF3B4	100	99.292	Pan_troglodytes
ENSNGAG00000016337	Sf3b4	100	78.774	ENSPTRG00000049727	-	78	84.877	Pan_troglodytes
ENSNGAG00000016337	Sf3b4	100	99.292	ENSPANG00000005126	SF3B4	100	99.292	Papio_anubis
ENSNGAG00000016337	Sf3b4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSNGAG00000016337	Sf3b4	66	75.714	ENSPSIG00000009565	SF3B4	88	74.468	Pelodiscus_sinensis
ENSNGAG00000016337	Sf3b4	100	99.764	ENSPEMG00000017568	Sf3b4	100	99.764	Peromyscus_maniculatus_bairdii
ENSNGAG00000016337	Sf3b4	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSNGAG00000016337	Sf3b4	100	98.821	ENSPCIG00000008765	SF3B4	100	98.821	Phascolarctos_cinereus
ENSNGAG00000016337	Sf3b4	64	90.476	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSNGAG00000016337	Sf3b4	64	90.476	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSNGAG00000016337	Sf3b4	64	90.476	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSNGAG00000016337	Sf3b4	63	96.635	ENSPCAG00000000392	SF3B4	69	96.635	Procavia_capensis
ENSNGAG00000016337	Sf3b4	100	99.528	ENSPCOG00000015399	SF3B4	100	99.528	Propithecus_coquereli
ENSNGAG00000016337	Sf3b4	100	99.528	ENSPVAG00000014171	SF3B4	100	99.528	Pteropus_vampyrus
ENSNGAG00000016337	Sf3b4	57	95.833	ENSPNYG00000012700	sf3b4	76	81.191	Pundamilia_nyererei
ENSNGAG00000016337	Sf3b4	57	96.667	ENSPNAG00000000686	sf3b4	79	78.462	Pygocentrus_nattereri
ENSNGAG00000016337	Sf3b4	100	99.764	ENSRNOG00000021181	Sf3b4	100	99.764	Rattus_norvegicus
ENSNGAG00000016337	Sf3b4	100	99.292	ENSRBIG00000043392	SF3B4	100	99.292	Rhinopithecus_bieti
ENSNGAG00000016337	Sf3b4	100	99.292	ENSRROG00000029366	SF3B4	100	99.292	Rhinopithecus_roxellana
ENSNGAG00000016337	Sf3b4	92	71.208	ENSRROG00000028213	-	56	76.364	Rhinopithecus_roxellana
ENSNGAG00000016337	Sf3b4	100	99.057	ENSSBOG00000012310	-	100	99.057	Saimiri_boliviensis_boliviensis
ENSNGAG00000016337	Sf3b4	100	72.406	ENSSBOG00000025174	-	73	78.947	Saimiri_boliviensis_boliviensis
ENSNGAG00000016337	Sf3b4	100	96.226	ENSSHAG00000004043	SF3B4	100	98.425	Sarcophilus_harrisii
ENSNGAG00000016337	Sf3b4	56	96.624	ENSSFOG00015008864	sf3b4	76	79.257	Scleropages_formosus
ENSNGAG00000016337	Sf3b4	57	96.667	ENSSMAG00000006837	sf3b4	77	82.132	Scophthalmus_maximus
ENSNGAG00000016337	Sf3b4	57	97.083	ENSSDUG00000012064	sf3b4	76	81.818	Seriola_dumerili
ENSNGAG00000016337	Sf3b4	57	97.083	ENSSLDG00000014226	sf3b4	76	81.818	Seriola_lalandi_dorsalis
ENSNGAG00000016337	Sf3b4	57	97.500	ENSSPAG00000019219	sf3b4	76	82.445	Stegastes_partitus
ENSNGAG00000016337	Sf3b4	100	99.764	ENSSSCG00000006665	-	100	99.764	Sus_scrofa
ENSNGAG00000016337	Sf3b4	85	66.298	ENSSSCG00000039440	-	63	91.111	Sus_scrofa
ENSNGAG00000016337	Sf3b4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSNGAG00000016337	Sf3b4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSNGAG00000016337	Sf3b4	54	96.957	ENSTNIG00000009156	sf3b4	58	97.368	Tetraodon_nigroviridis
ENSNGAG00000016337	Sf3b4	100	99.528	ENSTTRG00000005217	SF3B4	100	99.528	Tursiops_truncatus
ENSNGAG00000016337	Sf3b4	100	99.528	ENSUAMG00000022468	SF3B4	100	99.528	Ursus_americanus
ENSNGAG00000016337	Sf3b4	100	99.057	ENSUMAG00000003802	SF3B4	100	99.057	Ursus_maritimus
ENSNGAG00000016337	Sf3b4	97	99.515	ENSVPAG00000008152	SF3B4	100	99.515	Vicugna_pacos
ENSNGAG00000016337	Sf3b4	99	92.344	ENSVVUG00000007732	-	100	92.344	Vulpes_vulpes
ENSNGAG00000016337	Sf3b4	61	96.899	ENSVVUG00000022697	-	54	96.899	Vulpes_vulpes
ENSNGAG00000016337	Sf3b4	55	92.308	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSNGAG00000016337	Sf3b4	54	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSNGAG00000016337	Sf3b4	54	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus