EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000016363 (Gene tree)
Gene ID: 103739458
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 8025 bases
Position: chrKL198939.1:2420684-2428708
Accession: 103739458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000015287	RRM_1	PF00076.22	5.3e-14	1	1
ENSNGAP00000015292	RRM_1	PF00076.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000020890	-	544	XM_008839880	ENSNGAP00000015287	104 (aa)	XP_008838102	UPI000819B689
ENSNGAT00000020895	-	273	-	ENSNGAP00000015292	90 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000016363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000016363's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000016363	Slirp	90	70.213	ENSG00000119705	SLIRP	96	78.082	Homo_sapiens
ENSNGAG00000016363	Slirp	71	54.054	ENSAPOG00000001298	slirp	74	54.054	Acanthochromis_polyacanthus
ENSNGAG00000016363	Slirp	84	73.626	ENSAMEG00000003975	SLIRP	100	73.626	Ailuropoda_melanoleuca
ENSNGAG00000016363	Slirp	85	46.591	ENSACIG00000023083	slirp	85	46.591	Amphilophus_citrinellus
ENSNGAG00000016363	Slirp	84	48.276	ENSAOCG00000006342	slirp	87	48.276	Amphiprion_ocellaris
ENSNGAG00000016363	Slirp	84	48.276	ENSAPEG00000015719	-	88	48.276	Amphiprion_percula
ENSNGAG00000016363	Slirp	84	48.276	ENSAPEG00000015917	slirp	87	48.276	Amphiprion_percula
ENSNGAG00000016363	Slirp	71	50.000	ENSATEG00000013525	slirp	87	37.931	Anabas_testudineus
ENSNGAG00000016363	Slirp	84	48.864	ENSAMXG00000018693	slirp	88	48.864	Astyanax_mexicanus
ENSNGAG00000016363	Slirp	99	73.786	ENSCJAG00000016946	SLIRP	91	73.786	Callithrix_jacchus
ENSNGAG00000016363	Slirp	100	71.296	ENSCAFG00020015876	-	97	71.296	Canis_lupus_dingo
ENSNGAG00000016363	Slirp	99	74.757	ENSCCAG00000030130	SLIRP	91	74.757	Cebus_capucinus
ENSNGAG00000016363	Slirp	100	66.667	ENSCATG00000036327	SLIRP	95	68.182	Cercocebus_atys
ENSNGAG00000016363	Slirp	87	74.444	ENSCSAG00000011736	SLIRP	96	68.519	Chlorocebus_sabaeus
ENSNGAG00000016363	Slirp	87	51.111	ENSCPBG00000026327	SLIRP	90	51.111	Chrysemys_picta_bellii
ENSNGAG00000016363	Slirp	66	79.710	ENSCANG00000032892	SLIRP	90	71.591	Colobus_angolensis_palliatus
ENSNGAG00000016363	Slirp	100	69.444	ENSCGRG00001024068	Slirp	97	69.444	Cricetulus_griseus_chok1gshd
ENSNGAG00000016363	Slirp	100	69.444	ENSCGRG00000017440	Slirp	97	69.444	Cricetulus_griseus_crigri
ENSNGAG00000016363	Slirp	84	51.724	ENSCSEG00000015766	slirp	82	51.724	Cynoglossus_semilaevis
ENSNGAG00000016363	Slirp	66	50.725	ENSCVAG00000012504	slirp	68	50.725	Cyprinodon_variegatus
ENSNGAG00000016363	Slirp	72	49.333	ENSDARG00000097753	slirp	72	50.000	Danio_rerio
ENSNGAG00000016363	Slirp	85	77.273	ENSDNOG00000007721	SLIRP	97	71.296	Dasypus_novemcinctus
ENSNGAG00000016363	Slirp	100	75.926	ENSDORG00000012379	Slirp	97	75.926	Dipodomys_ordii
ENSNGAG00000016363	Slirp	90	70.213	ENSETEG00000010345	SLIRP	97	66.667	Echinops_telfairi
ENSNGAG00000016363	Slirp	100	76.852	ENSEASG00005020193	SLIRP	97	76.852	Equus_asinus_asinus
ENSNGAG00000016363	Slirp	86	65.169	ENSEEUG00000007257	SLIRP	87	65.169	Erinaceus_europaeus
ENSNGAG00000016363	Slirp	83	47.674	ENSELUG00000016800	slirp	84	47.674	Esox_lucius
ENSNGAG00000016363	Slirp	81	77.273	ENSFCAG00000036326	SLIRP	90	77.273	Felis_catus
ENSNGAG00000016363	Slirp	67	48.571	ENSFALG00000012583	SLIRP	86	45.055	Ficedula_albicollis
ENSNGAG00000016363	Slirp	99	67.961	ENSFDAG00000008347	SLIRP	89	67.961	Fukomys_damarensis
ENSNGAG00000016363	Slirp	74	45.455	ENSFHEG00000004709	slirp	83	45.455	Fundulus_heteroclitus
ENSNGAG00000016363	Slirp	71	50.000	ENSGMOG00000016948	slirp	71	50.000	Gadus_morhua
ENSNGAG00000016363	Slirp	84	45.977	ENSGALG00000031238	SLIRP	85	46.988	Gallus_gallus
ENSNGAG00000016363	Slirp	82	47.059	ENSGAFG00000010998	slirp	84	47.059	Gambusia_affinis
ENSNGAG00000016363	Slirp	68	47.887	ENSGACG00000020137	slirp	83	47.887	Gasterosteus_aculeatus
ENSNGAG00000016363	Slirp	84	57.471	ENSGAGG00000009953	SLIRP	60	57.471	Gopherus_agassizii
ENSNGAG00000016363	Slirp	90	70.213	ENSGGOG00000011059	-	95	71.591	Gorilla_gorilla
ENSNGAG00000016363	Slirp	100	61.111	ENSHGLG00000018491	SLIRP	97	61.111	Heterocephalus_glaber_female
ENSNGAG00000016363	Slirp	100	61.111	ENSHGLG00100014153	SLIRP	97	61.111	Heterocephalus_glaber_male
ENSNGAG00000016363	Slirp	73	54.545	ENSHCOG00000006795	slirp	78	54.545	Hippocampus_comes
ENSNGAG00000016363	Slirp	71	48.649	ENSIPUG00000010214	SLIRP	74	48.649	Ictalurus_punctatus
ENSNGAG00000016363	Slirp	90	75.532	ENSSTOG00000034316	SLIRP	97	72.222	Ictidomys_tridecemlineatus
ENSNGAG00000016363	Slirp	66	47.826	ENSKMAG00000002038	slirp	66	47.826	Kryptolebias_marmoratus
ENSNGAG00000016363	Slirp	84	48.276	ENSLBEG00000007564	slirp	87	48.276	Labrus_bergylta
ENSNGAG00000016363	Slirp	84	49.425	ENSLACG00000013434	SLIRP	83	49.425	Latimeria_chalumnae
ENSNGAG00000016363	Slirp	87	73.333	ENSMFAG00000042960	SLIRP	95	69.318	Macaca_fascicularis
ENSNGAG00000016363	Slirp	87	72.222	ENSMMUG00000029256	SLIRP	95	69.318	Macaca_mulatta
ENSNGAG00000016363	Slirp	87	73.333	ENSMNEG00000028921	SLIRP	95	69.318	Macaca_nemestrina
ENSNGAG00000016363	Slirp	98	57.547	ENSMLEG00000043644	SLIRP	90	68.182	Mandrillus_leucophaeus
ENSNGAG00000016363	Slirp	84	48.276	ENSMZEG00005004617	slirp	86	48.276	Maylandia_zebra
ENSNGAG00000016363	Slirp	100	74.074	ENSMAUG00000003857	Slirp	97	74.074	Mesocricetus_auratus
ENSNGAG00000016363	Slirp	100	68.519	ENSMICG00000012080	SLIRP	97	68.519	Microcebus_murinus
ENSNGAG00000016363	Slirp	100	75.000	ENSMOCG00000016019	Slirp	96	75.000	Microtus_ochrogaster
ENSNGAG00000016363	Slirp	84	45.977	ENSMMOG00000018268	slirp	87	45.977	Mola_mola
ENSNGAG00000016363	Slirp	68	64.789	ENSMODG00000005207	-	100	64.789	Monodelphis_domestica
ENSNGAG00000016363	Slirp	85	48.864	ENSMALG00000012581	slirp	88	48.864	Monopterus_albus
ENSNGAG00000016363	Slirp	100	71.560	MGP_CAROLIEiJ_G0017995	Slirp	100	71.560	Mus_caroli
ENSNGAG00000016363	Slirp	100	72.477	ENSMUSG00000021040	Slirp	96	72.477	Mus_musculus
ENSNGAG00000016363	Slirp	100	72.477	MGP_SPRETEiJ_G0018840	Slirp	96	72.477	Mus_spretus
ENSNGAG00000016363	Slirp	87	76.667	ENSMLUG00000024998	-	97	70.370	Myotis_lucifugus
ENSNGAG00000016363	Slirp	87	78.889	ENSMLUG00000029544	-	97	73.148	Myotis_lucifugus
ENSNGAG00000016363	Slirp	100	65.741	ENSNLEG00000032459	-	95	67.045	Nomascus_leucogenys
ENSNGAG00000016363	Slirp	98	63.725	ENSNLEG00000027238	-	94	65.476	Nomascus_leucogenys
ENSNGAG00000016363	Slirp	100	69.444	ENSODEG00000012580	SLIRP	99	69.231	Octodon_degus
ENSNGAG00000016363	Slirp	84	49.425	ENSONIG00000011692	slirp	86	49.425	Oreochromis_niloticus
ENSNGAG00000016363	Slirp	88	57.000	ENSOANG00000022366	SLIRP	90	57.000	Ornithorhynchus_anatinus
ENSNGAG00000016363	Slirp	71	52.703	ENSORLG00000010761	slirp	57	52.703	Oryzias_latipes
ENSNGAG00000016363	Slirp	71	54.054	ENSORLG00020022188	slirp	74	54.054	Oryzias_latipes_hni
ENSNGAG00000016363	Slirp	88	48.352	ENSORLG00015020171	slirp	85	48.352	Oryzias_latipes_hsok
ENSNGAG00000016363	Slirp	71	52.703	ENSOMEG00000019321	slirp	74	52.703	Oryzias_melastigma
ENSNGAG00000016363	Slirp	90	69.149	ENSPPAG00000040710	-	95	71.591	Pan_paniscus
ENSNGAG00000016363	Slirp	81	77.273	ENSPPRG00000014350	SLIRP	90	77.273	Panthera_pardus
ENSNGAG00000016363	Slirp	81	77.273	ENSPTIG00000014196	SLIRP	90	77.273	Panthera_tigris_altaica
ENSNGAG00000016363	Slirp	90	70.213	ENSPTRG00000030691	SLIRP	99	67.593	Pan_troglodytes
ENSNGAG00000016363	Slirp	100	67.593	ENSPANG00000026323	SLIRP	95	69.318	Papio_anubis
ENSNGAG00000016363	Slirp	65	54.412	ENSPKIG00000008831	slirp	67	54.412	Paramormyrops_kingsleyae
ENSNGAG00000016363	Slirp	66	57.971	ENSPMGG00000010541	slirp	79	57.971	Periophthalmus_magnuspinnatus
ENSNGAG00000016363	Slirp	86	73.333	ENSPEMG00000013234	Slirp	96	67.890	Peromyscus_maniculatus_bairdii
ENSNGAG00000016363	Slirp	65	51.471	ENSPMAG00000009355	slirp	76	51.471	Petromyzon_marinus
ENSNGAG00000016363	Slirp	83	58.140	ENSPCIG00000026842	-	87	58.140	Phascolarctos_cinereus
ENSNGAG00000016363	Slirp	71	52.703	ENSPFOG00000006758	slirp	74	52.703	Poecilia_formosa
ENSNGAG00000016363	Slirp	83	47.674	ENSPLAG00000011140	slirp	85	47.674	Poecilia_latipinna
ENSNGAG00000016363	Slirp	71	52.703	ENSPMEG00000019535	slirp	74	52.703	Poecilia_mexicana
ENSNGAG00000016363	Slirp	72	52.000	ENSPREG00000011673	slirp	75	52.000	Poecilia_reticulata
ENSNGAG00000016363	Slirp	87	72.222	ENSPPYG00000006030	SLIRP	96	66.667	Pongo_abelii
ENSNGAG00000016363	Slirp	100	69.444	ENSPCOG00000015159	SLIRP	97	69.444	Propithecus_coquereli
ENSNGAG00000016363	Slirp	85	54.545	ENSPNAG00000008633	slirp	88	54.545	Pygocentrus_nattereri
ENSNGAG00000016363	Slirp	86	75.281	ENSRBIG00000032222	-	97	68.519	Rhinopithecus_bieti
ENSNGAG00000016363	Slirp	66	76.812	ENSRBIG00000032998	-	81	68.182	Rhinopithecus_bieti
ENSNGAG00000016363	Slirp	64	77.612	ENSRBIG00000031396	-	86	68.605	Rhinopithecus_bieti
ENSNGAG00000016363	Slirp	86	71.910	ENSRBIG00000035817	-	99	65.741	Rhinopithecus_bieti
ENSNGAG00000016363	Slirp	66	78.261	ENSRROG00000017133	-	92	69.318	Rhinopithecus_roxellana
ENSNGAG00000016363	Slirp	81	71.429	ENSRROG00000041312	-	99	65.049	Rhinopithecus_roxellana
ENSNGAG00000016363	Slirp	86	75.281	ENSRROG00000036656	-	97	68.519	Rhinopithecus_roxellana
ENSNGAG00000016363	Slirp	64	79.104	ENSRROG00000035604	-	86	69.767	Rhinopithecus_roxellana
ENSNGAG00000016363	Slirp	87	67.778	ENSSBOG00000020014	SLIRP	84	73.750	Saimiri_boliviensis_boliviensis
ENSNGAG00000016363	Slirp	74	57.143	ENSSFOG00015011165	slirp	78	57.143	Scleropages_formosus
ENSNGAG00000016363	Slirp	100	36.538	ENSSMAG00000012930	slirp	96	36.538	Scophthalmus_maximus
ENSNGAG00000016363	Slirp	85	50.000	ENSSDUG00000021883	slirp	57	50.000	Seriola_dumerili
ENSNGAG00000016363	Slirp	71	55.405	ENSSLDG00000023136	slirp	67	55.405	Seriola_lalandi_dorsalis
ENSNGAG00000016363	Slirp	86	47.191	ENSSPUG00000009346	SLIRP	90	47.191	Sphenodon_punctatus
ENSNGAG00000016363	Slirp	71	55.405	ENSSPAG00000013477	slirp	74	55.405	Stegastes_partitus
ENSNGAG00000016363	Slirp	100	72.222	ENSSSCG00000028167	SLIRP	97	72.222	Sus_scrofa
ENSNGAG00000016363	Slirp	67	51.429	ENSTGUG00000012337	SLIRP	86	47.253	Taeniopygia_guttata
ENSNGAG00000016363	Slirp	81	48.837	ENSTRUG00000020127	slirp	83	48.837	Takifugu_rubripes
ENSNGAG00000016363	Slirp	100	76.852	ENSUAMG00000022445	SLIRP	97	76.852	Ursus_americanus
ENSNGAG00000016363	Slirp	100	77.778	ENSUMAG00000007166	SLIRP	97	77.778	Ursus_maritimus
ENSNGAG00000016363	Slirp	100	70.370	ENSVPAG00000001781	SLIRP	97	70.370	Vicugna_pacos
ENSNGAG00000016363	Slirp	89	76.344	ENSVVUG00000004436	SLIRP	97	73.148	Vulpes_vulpes
ENSNGAG00000016363	Slirp	67	54.286	ENSXETG00000030343	SLIRP	79	54.286	Xenopus_tropicalis
ENSNGAG00000016363	Slirp	83	46.512	ENSXCOG00000009422	slirp	85	46.512	Xiphophorus_couchianus
ENSNGAG00000016363	Slirp	83	46.512	ENSXMAG00000015655	slirp	85	46.512	Xiphophorus_maculatus