EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000016977 (Gene tree)
Gene ID: 103740450
Gene Symbol: Sf3a1
Alias: 1200014H24Rik|5930416L09Rik
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 23474 bases
Position: chrKL202150.1:2149382-2172855
Accession: 103740450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000016166	PRP21_like_P	PF12230.8	8.1e-52	1	1
ENSNGAP00000016166	Surp	PF01805.20	6.2e-46	1	2
ENSNGAP00000016166	Surp	PF01805.20	6.2e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000021780	-	2887	XM_008841062	ENSNGAP00000016166	793 (aa)	XP_008839284	UPI0004ECFFB2

Gene Model

Click here to download ENSNGAG00000016977's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000016977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000016977	Sf3a1	100	98.865	ENSG00000099995	SF3A1	100	98.865	Homo_sapiens
ENSNGAG00000016977	Sf3a1	100	83.125	ENSAPOG00000020465	sf3a1	99	84.910	Acanthochromis_polyacanthus
ENSNGAG00000016977	Sf3a1	100	98.239	ENSAMEG00000007737	SF3A1	100	98.239	Ailuropoda_melanoleuca
ENSNGAG00000016977	Sf3a1	100	84.277	ENSACIG00000020672	sf3a1	99	85.038	Amphilophus_citrinellus
ENSNGAG00000016977	Sf3a1	100	83.000	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSNGAG00000016977	Sf3a1	100	83.125	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSNGAG00000016977	Sf3a1	96	85.677	ENSATEG00000021201	sf3a1	97	85.807	Anabas_testudineus
ENSNGAG00000016977	Sf3a1	95	93.923	ENSAPLG00000009057	SF3A1	99	93.782	Anas_platyrhynchos
ENSNGAG00000016977	Sf3a1	100	85.714	ENSACAG00000009415	SF3A1	100	87.438	Anolis_carolinensis
ENSNGAG00000016977	Sf3a1	100	98.739	ENSANAG00000032045	SF3A1	100	98.739	Aotus_nancymaae
ENSNGAG00000016977	Sf3a1	100	83.980	ENSACLG00000012622	sf3a1	99	85.531	Astatotilapia_calliptera
ENSNGAG00000016977	Sf3a1	99	83.186	ENSAMXG00000005382	sf3a1	98	85.584	Astyanax_mexicanus
ENSNGAG00000016977	Sf3a1	100	98.991	ENSBTAG00000003390	SF3A1	100	98.991	Bos_taurus
ENSNGAG00000016977	Sf3a1	84	43.627	WBGene00004188	prp-21	94	43.863	Caenorhabditis_elegans
ENSNGAG00000016977	Sf3a1	100	98.865	ENSCJAG00000010370	SF3A1	100	98.865	Callithrix_jacchus
ENSNGAG00000016977	Sf3a1	100	98.739	ENSCAFG00000012559	SF3A1	100	98.739	Canis_familiaris
ENSNGAG00000016977	Sf3a1	100	98.739	ENSCAFG00020000838	SF3A1	100	98.739	Canis_lupus_dingo
ENSNGAG00000016977	Sf3a1	100	98.865	ENSCHIG00000018642	SF3A1	100	98.865	Capra_hircus
ENSNGAG00000016977	Sf3a1	100	99.117	ENSTSYG00000004739	SF3A1	100	99.117	Carlito_syrichta
ENSNGAG00000016977	Sf3a1	94	81.442	ENSCAPG00000015414	SF3A1	98	81.442	Cavia_aperea
ENSNGAG00000016977	Sf3a1	100	98.739	ENSCPOG00000014589	SF3A1	100	98.739	Cavia_porcellus
ENSNGAG00000016977	Sf3a1	100	98.739	ENSCCAG00000032006	SF3A1	100	98.739	Cebus_capucinus
ENSNGAG00000016977	Sf3a1	100	98.991	ENSCATG00000029241	SF3A1	100	98.991	Cercocebus_atys
ENSNGAG00000016977	Sf3a1	100	98.739	ENSCLAG00000006508	SF3A1	100	98.739	Chinchilla_lanigera
ENSNGAG00000016977	Sf3a1	100	98.865	ENSCSAG00000009470	SF3A1	100	98.865	Chlorocebus_sabaeus
ENSNGAG00000016977	Sf3a1	61	99.083	ENSCHOG00000005201	SF3A1	69	99.083	Choloepus_hoffmanni
ENSNGAG00000016977	Sf3a1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.562	Chrysemys_picta_bellii
ENSNGAG00000016977	Sf3a1	94	52.381	ENSCING00000008526	-	66	57.854	Ciona_intestinalis
ENSNGAG00000016977	Sf3a1	96	51.742	ENSCSAVG00000005608	-	91	64.286	Ciona_savignyi
ENSNGAG00000016977	Sf3a1	100	98.865	ENSCANG00000033564	SF3A1	100	98.865	Colobus_angolensis_palliatus
ENSNGAG00000016977	Sf3a1	100	98.865	ENSCGRG00001008933	Sf3a1	100	98.865	Cricetulus_griseus_chok1gshd
ENSNGAG00000016977	Sf3a1	100	98.865	ENSCGRG00000006127	Sf3a1	100	98.865	Cricetulus_griseus_crigri
ENSNGAG00000016977	Sf3a1	98	82.781	ENSCSEG00000010792	sf3a1	99	82.908	Cynoglossus_semilaevis
ENSNGAG00000016977	Sf3a1	100	82.767	ENSCVAG00000004560	sf3a1	99	83.269	Cyprinodon_variegatus
ENSNGAG00000016977	Sf3a1	100	82.412	ENSDARG00000041887	sf3a1	98	84.715	Danio_rerio
ENSNGAG00000016977	Sf3a1	100	98.491	ENSDNOG00000010629	SF3A1	100	98.491	Dasypus_novemcinctus
ENSNGAG00000016977	Sf3a1	100	99.117	ENSDORG00000005613	Sf3a1	100	99.117	Dipodomys_ordii
ENSNGAG00000016977	Sf3a1	79	61.654	FBgn0266917	Sf3a1	84	59.567	Drosophila_melanogaster
ENSNGAG00000016977	Sf3a1	84	97.006	ENSETEG00000017194	SF3A1	100	95.299	Echinops_telfairi
ENSNGAG00000016977	Sf3a1	98	66.102	ENSEBUG00000001285	sf3a1	95	68.296	Eptatretus_burgeri
ENSNGAG00000016977	Sf3a1	100	99.369	ENSEASG00005010254	SF3A1	100	99.369	Equus_asinus_asinus
ENSNGAG00000016977	Sf3a1	100	99.369	ENSECAG00000023962	SF3A1	100	99.369	Equus_caballus
ENSNGAG00000016977	Sf3a1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSNGAG00000016977	Sf3a1	100	82.331	ENSELUG00000022578	sf3a1	99	82.420	Esox_lucius
ENSNGAG00000016977	Sf3a1	100	98.739	ENSFCAG00000011932	SF3A1	100	98.739	Felis_catus
ENSNGAG00000016977	Sf3a1	95	92.989	ENSFALG00000006944	SF3A1	100	92.065	Ficedula_albicollis
ENSNGAG00000016977	Sf3a1	100	98.739	ENSFDAG00000009560	SF3A1	100	98.739	Fukomys_damarensis
ENSNGAG00000016977	Sf3a1	100	84.025	ENSFHEG00000010866	sf3a1	99	84.419	Fundulus_heteroclitus
ENSNGAG00000016977	Sf3a1	100	81.108	ENSGMOG00000016024	sf3a1	98	80.410	Gadus_morhua
ENSNGAG00000016977	Sf3a1	95	93.915	ENSGALG00000007937	SF3A1	100	92.569	Gallus_gallus
ENSNGAG00000016977	Sf3a1	100	83.459	ENSGAFG00000009111	sf3a1	97	84.706	Gambusia_affinis
ENSNGAG00000016977	Sf3a1	100	82.116	ENSGACG00000011893	sf3a1	97	83.901	Gasterosteus_aculeatus
ENSNGAG00000016977	Sf3a1	96	91.196	ENSGAGG00000000762	SF3A1	99	91.721	Gopherus_agassizii
ENSNGAG00000016977	Sf3a1	100	98.865	ENSGGOG00000012631	SF3A1	100	98.865	Gorilla_gorilla
ENSNGAG00000016977	Sf3a1	100	84.131	ENSHBUG00000015795	sf3a1	99	85.531	Haplochromis_burtoni
ENSNGAG00000016977	Sf3a1	100	98.991	ENSHGLG00000007907	SF3A1	100	98.991	Heterocephalus_glaber_female
ENSNGAG00000016977	Sf3a1	100	98.991	ENSHGLG00100013799	SF3A1	100	98.991	Heterocephalus_glaber_male
ENSNGAG00000016977	Sf3a1	100	80.126	ENSHCOG00000015423	sf3a1	98	81.747	Hippocampus_comes
ENSNGAG00000016977	Sf3a1	96	82.422	ENSIPUG00000002470	sf3a1	98	83.203	Ictalurus_punctatus
ENSNGAG00000016977	Sf3a1	100	99.117	ENSSTOG00000013892	SF3A1	100	99.117	Ictidomys_tridecemlineatus
ENSNGAG00000016977	Sf3a1	100	98.992	ENSJJAG00000022566	Sf3a1	100	98.992	Jaculus_jaculus
ENSNGAG00000016977	Sf3a1	100	82.642	ENSKMAG00000002400	sf3a1	98	84.635	Kryptolebias_marmoratus
ENSNGAG00000016977	Sf3a1	100	82.767	ENSLBEG00000022974	sf3a1	99	83.760	Labrus_bergylta
ENSNGAG00000016977	Sf3a1	100	87.202	ENSLACG00000003565	SF3A1	97	88.672	Latimeria_chalumnae
ENSNGAG00000016977	Sf3a1	100	85.088	ENSLOCG00000008251	sf3a1	97	87.143	Lepisosteus_oculatus
ENSNGAG00000016977	Sf3a1	98	61.783	ENSLAFG00000026032	-	97	62.211	Loxodonta_africana
ENSNGAG00000016977	Sf3a1	100	98.613	ENSLAFG00000000448	SF3A1	100	98.613	Loxodonta_africana
ENSNGAG00000016977	Sf3a1	100	98.739	ENSMFAG00000031979	SF3A1	100	98.739	Macaca_fascicularis
ENSNGAG00000016977	Sf3a1	100	98.739	ENSMMUG00000005547	SF3A1	100	98.739	Macaca_mulatta
ENSNGAG00000016977	Sf3a1	100	98.613	ENSMNEG00000037229	SF3A1	100	98.613	Macaca_nemestrina
ENSNGAG00000016977	Sf3a1	100	98.865	ENSMLEG00000041908	SF3A1	100	98.865	Mandrillus_leucophaeus
ENSNGAG00000016977	Sf3a1	97	85.511	ENSMAMG00000006460	sf3a1	96	86.198	Mastacembelus_armatus
ENSNGAG00000016977	Sf3a1	100	83.980	ENSMZEG00005009633	sf3a1	99	85.531	Maylandia_zebra
ENSNGAG00000016977	Sf3a1	95	93.915	ENSMGAG00000001330	SF3A1	99	93.774	Meleagris_gallopavo
ENSNGAG00000016977	Sf3a1	92	95.355	ENSMAUG00000020317	Sf3a1	94	95.355	Mesocricetus_auratus
ENSNGAG00000016977	Sf3a1	100	98.613	ENSMICG00000010038	SF3A1	100	98.613	Microcebus_murinus
ENSNGAG00000016977	Sf3a1	100	98.991	ENSMOCG00000008438	Sf3a1	100	98.991	Microtus_ochrogaster
ENSNGAG00000016977	Sf3a1	100	81.407	ENSMMOG00000015588	sf3a1	98	83.398	Mola_mola
ENSNGAG00000016977	Sf3a1	100	97.604	ENSMODG00000009270	SF3A1	100	97.604	Monodelphis_domestica
ENSNGAG00000016977	Sf3a1	100	84.383	ENSMALG00000000148	sf3a1	99	86.104	Monopterus_albus
ENSNGAG00000016977	Sf3a1	100	98.235	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.235	Mus_caroli
ENSNGAG00000016977	Sf3a1	100	98.235	ENSMUSG00000002129	Sf3a1	100	98.235	Mus_musculus
ENSNGAG00000016977	Sf3a1	100	98.235	MGP_PahariEiJ_G0016862	Sf3a1	100	98.235	Mus_pahari
ENSNGAG00000016977	Sf3a1	100	98.235	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.235	Mus_spretus
ENSNGAG00000016977	Sf3a1	100	98.739	ENSMPUG00000013144	SF3A1	100	98.739	Mustela_putorius_furo
ENSNGAG00000016977	Sf3a1	100	98.865	ENSMLUG00000002139	SF3A1	100	98.865	Myotis_lucifugus
ENSNGAG00000016977	Sf3a1	100	84.257	ENSNBRG00000016642	sf3a1	96	86.957	Neolamprologus_brichardi
ENSNGAG00000016977	Sf3a1	100	98.865	ENSNLEG00000003686	SF3A1	100	98.865	Nomascus_leucogenys
ENSNGAG00000016977	Sf3a1	96	87.895	ENSMEUG00000008741	SF3A1	100	87.895	Notamacropus_eugenii
ENSNGAG00000016977	Sf3a1	100	98.108	ENSOPRG00000016636	SF3A1	100	98.108	Ochotona_princeps
ENSNGAG00000016977	Sf3a1	100	98.613	ENSODEG00000002571	SF3A1	100	98.613	Octodon_degus
ENSNGAG00000016977	Sf3a1	100	83.980	ENSONIG00000010848	sf3a1	99	84.910	Oreochromis_niloticus
ENSNGAG00000016977	Sf3a1	100	98.613	ENSOCUG00000007633	SF3A1	100	98.613	Oryctolagus_cuniculus
ENSNGAG00000016977	Sf3a1	96	81.747	ENSORLG00000013050	sf3a1	99	84.112	Oryzias_latipes
ENSNGAG00000016977	Sf3a1	99	80.126	ENSORLG00020003236	sf3a1	94	84.246	Oryzias_latipes_hni
ENSNGAG00000016977	Sf3a1	100	82.516	ENSORLG00015017411	sf3a1	99	84.015	Oryzias_latipes_hsok
ENSNGAG00000016977	Sf3a1	100	82.893	ENSOMEG00000013362	sf3a1	99	84.015	Oryzias_melastigma
ENSNGAG00000016977	Sf3a1	100	98.487	ENSOGAG00000012931	SF3A1	100	98.487	Otolemur_garnettii
ENSNGAG00000016977	Sf3a1	100	97.100	ENSOARG00000006849	SF3A1	100	97.100	Ovis_aries
ENSNGAG00000016977	Sf3a1	100	97.856	ENSPPAG00000041790	SF3A1	100	97.856	Pan_paniscus
ENSNGAG00000016977	Sf3a1	100	98.739	ENSPPRG00000004391	SF3A1	100	98.739	Panthera_pardus
ENSNGAG00000016977	Sf3a1	97	98.705	ENSPTIG00000000844	SF3A1	100	98.705	Panthera_tigris_altaica
ENSNGAG00000016977	Sf3a1	100	98.865	ENSPTRG00000014240	SF3A1	100	98.865	Pan_troglodytes
ENSNGAG00000016977	Sf3a1	100	98.865	ENSPANG00000020772	SF3A1	100	98.865	Papio_anubis
ENSNGAG00000016977	Sf3a1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.717	Pelodiscus_sinensis
ENSNGAG00000016977	Sf3a1	96	84.162	ENSPMGG00000023096	sf3a1	100	83.770	Periophthalmus_magnuspinnatus
ENSNGAG00000016977	Sf3a1	100	99.117	ENSPEMG00000009494	Sf3a1	100	99.117	Peromyscus_maniculatus_bairdii
ENSNGAG00000016977	Sf3a1	69	77.677	ENSPMAG00000007139	-	90	77.570	Petromyzon_marinus
ENSNGAG00000016977	Sf3a1	100	97.478	ENSPCIG00000022692	SF3A1	100	97.478	Phascolarctos_cinereus
ENSNGAG00000016977	Sf3a1	100	75.000	ENSPFOG00000016768	sf3a1	93	78.776	Poecilia_formosa
ENSNGAG00000016977	Sf3a1	100	83.774	ENSPLAG00000017268	sf3a1	99	83.780	Poecilia_latipinna
ENSNGAG00000016977	Sf3a1	84	85.843	ENSPMEG00000019811	sf3a1	98	85.090	Poecilia_mexicana
ENSNGAG00000016977	Sf3a1	100	83.899	ENSPREG00000010347	sf3a1	99	84.163	Poecilia_reticulata
ENSNGAG00000016977	Sf3a1	100	98.865	ENSPPYG00000011707	SF3A1	100	98.865	Pongo_abelii
ENSNGAG00000016977	Sf3a1	57	99.057	ENSPCAG00000003266	SF3A1	57	99.057	Procavia_capensis
ENSNGAG00000016977	Sf3a1	100	98.865	ENSPCOG00000026630	SF3A1	100	98.865	Propithecus_coquereli
ENSNGAG00000016977	Sf3a1	100	94.704	ENSPVAG00000017719	SF3A1	94	98.121	Pteropus_vampyrus
ENSNGAG00000016977	Sf3a1	100	84.131	ENSPNYG00000018706	sf3a1	99	85.531	Pundamilia_nyererei
ENSNGAG00000016977	Sf3a1	96	84.395	ENSPNAG00000003721	sf3a1	98	85.696	Pygocentrus_nattereri
ENSNGAG00000016977	Sf3a1	100	98.361	ENSRNOG00000005218	Sf3a1	100	98.361	Rattus_norvegicus
ENSNGAG00000016977	Sf3a1	100	98.739	ENSRBIG00000032167	SF3A1	100	98.739	Rhinopithecus_bieti
ENSNGAG00000016977	Sf3a1	100	98.739	ENSRROG00000044908	SF3A1	100	98.739	Rhinopithecus_roxellana
ENSNGAG00000016977	Sf3a1	92	98.772	ENSSBOG00000021960	SF3A1	100	98.966	Saimiri_boliviensis_boliviensis
ENSNGAG00000016977	Sf3a1	99	92.911	ENSSHAG00000003666	SF3A1	98	94.825	Sarcophilus_harrisii
ENSNGAG00000016977	Sf3a1	100	83.354	ENSSFOG00015004579	sf3a1	99	85.133	Scleropages_formosus
ENSNGAG00000016977	Sf3a1	100	81.635	ENSSMAG00000004275	sf3a1	97	83.529	Scophthalmus_maximus
ENSNGAG00000016977	Sf3a1	100	84.025	ENSSDUG00000022219	sf3a1	97	85.752	Seriola_dumerili
ENSNGAG00000016977	Sf3a1	100	84.025	ENSSLDG00000012642	sf3a1	97	85.752	Seriola_lalandi_dorsalis
ENSNGAG00000016977	Sf3a1	97	95.337	ENSSARG00000005960	SF3A1	100	95.337	Sorex_araneus
ENSNGAG00000016977	Sf3a1	96	91.839	ENSSPUG00000018863	SF3A1	100	91.791	Sphenodon_punctatus
ENSNGAG00000016977	Sf3a1	100	84.125	ENSSPAG00000011856	sf3a1	99	85.294	Stegastes_partitus
ENSNGAG00000016977	Sf3a1	100	98.865	ENSSSCG00000010002	SF3A1	100	98.865	Sus_scrofa
ENSNGAG00000016977	Sf3a1	95	93.931	ENSTGUG00000010547	SF3A1	99	93.790	Taeniopygia_guttata
ENSNGAG00000016977	Sf3a1	100	81.635	ENSTRUG00000006118	sf3a1	98	82.300	Takifugu_rubripes
ENSNGAG00000016977	Sf3a1	64	81.041	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSNGAG00000016977	Sf3a1	100	91.803	ENSTBEG00000012771	SF3A1	100	91.803	Tupaia_belangeri
ENSNGAG00000016977	Sf3a1	100	98.615	ENSTTRG00000001535	SF3A1	100	98.615	Tursiops_truncatus
ENSNGAG00000016977	Sf3a1	99	97.840	ENSUAMG00000006750	SF3A1	99	97.840	Ursus_americanus
ENSNGAG00000016977	Sf3a1	99	97.832	ENSUMAG00000016665	SF3A1	99	97.832	Ursus_maritimus
ENSNGAG00000016977	Sf3a1	100	98.739	ENSVVUG00000003075	SF3A1	100	98.739	Vulpes_vulpes
ENSNGAG00000016977	Sf3a1	100	85.822	ENSXETG00000016144	sf3a1	100	85.696	Xenopus_tropicalis
ENSNGAG00000016977	Sf3a1	100	83.208	ENSXCOG00000015653	sf3a1	97	84.444	Xiphophorus_couchianus
ENSNGAG00000016977	Sf3a1	100	83.333	ENSXMAG00000002753	sf3a1	97	84.575	Xiphophorus_maculatus