EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000017344 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 547 bases
Position: chrKL204267.1:2497979-2498525
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000016684	RNA_pol_Rpb5_N	PF03871.14	5.7e-27	1	1
ENSNGAP00000016684	RNA_pol_Rpb5_C	PF01191.19	8.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000022305	-	480	-	ENSNGAP00000016684	159 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000017344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000017344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000017344	-	96	75.419	ENSNGAG00000001147	Polr2e	85	75.419

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000017344	-	96	73.743	ENSG00000099817	POLR2E	88	73.743	Homo_sapiens
ENSNGAG00000017344	-	96	72.626	ENSAPOG00000002935	polr2eb	85	72.626	Acanthochromis_polyacanthus
ENSNGAG00000017344	-	96	74.302	ENSAMEG00000003159	POLR2E	85	74.302	Ailuropoda_melanoleuca
ENSNGAG00000017344	-	96	60.335	ENSACIG00000024371	polr2eb	83	60.335	Amphilophus_citrinellus
ENSNGAG00000017344	-	96	72.626	ENSAOCG00000018166	polr2eb	85	72.626	Amphiprion_ocellaris
ENSNGAG00000017344	-	96	72.626	ENSAPEG00000009000	polr2eb	85	72.626	Amphiprion_percula
ENSNGAG00000017344	-	96	72.626	ENSATEG00000023760	polr2eb	85	72.626	Anabas_testudineus
ENSNGAG00000017344	-	96	74.302	ENSANAG00000038488	POLR2E	85	74.302	Aotus_nancymaae
ENSNGAG00000017344	-	96	73.184	ENSACLG00000005254	polr2eb	85	73.184	Astatotilapia_calliptera
ENSNGAG00000017344	-	96	73.184	ENSAMXG00000018915	POLR2E	85	73.184	Astyanax_mexicanus
ENSNGAG00000017344	-	96	74.302	ENSBTAG00000020776	POLR2E	85	74.302	Bos_taurus
ENSNGAG00000017344	-	96	57.542	WBGene00019246	rpb-5	85	57.542	Caenorhabditis_elegans
ENSNGAG00000017344	-	56	71.296	ENSCJAG00000007666	-	59	71.296	Callithrix_jacchus
ENSNGAG00000017344	-	94	72.881	ENSCAFG00000019546	POLR2E	84	72.881	Canis_familiaris
ENSNGAG00000017344	-	96	74.302	ENSCAFG00020017111	POLR2E	85	74.302	Canis_lupus_dingo
ENSNGAG00000017344	-	96	74.302	ENSCHIG00000014151	POLR2E	85	74.302	Capra_hircus
ENSNGAG00000017344	-	81	67.097	ENSTSYG00000026377	POLR2E	74	67.097	Carlito_syrichta
ENSNGAG00000017344	-	89	73.810	ENSCAPG00000010843	POLR2E	82	73.810	Cavia_aperea
ENSNGAG00000017344	-	96	74.302	ENSCPOG00000001542	POLR2E	85	74.302	Cavia_porcellus
ENSNGAG00000017344	-	96	74.302	ENSCCAG00000025658	POLR2E	85	74.302	Cebus_capucinus
ENSNGAG00000017344	-	96	74.302	ENSCATG00000008926	POLR2E	85	74.302	Cercocebus_atys
ENSNGAG00000017344	-	96	60.819	ENSCLAG00000009238	-	85	60.819	Chinchilla_lanigera
ENSNGAG00000017344	-	96	73.743	ENSCLAG00000014874	-	85	73.743	Chinchilla_lanigera
ENSNGAG00000017344	-	96	74.302	ENSCSAG00000012336	POLR2E	85	74.302	Chlorocebus_sabaeus
ENSNGAG00000017344	-	96	74.302	ENSCPBG00000009702	POLR2E	85	74.302	Chrysemys_picta_bellii
ENSNGAG00000017344	-	99	61.622	ENSCING00000024933	-	88	61.622	Ciona_intestinalis
ENSNGAG00000017344	-	96	74.302	ENSCANG00000025560	POLR2E	85	74.302	Colobus_angolensis_palliatus
ENSNGAG00000017344	-	96	75.419	ENSCGRG00001022927	Polr2e	85	75.419	Cricetulus_griseus_chok1gshd
ENSNGAG00000017344	-	96	68.478	ENSCGRG00000016441	Polr2e	86	68.478	Cricetulus_griseus_crigri
ENSNGAG00000017344	-	96	72.067	ENSCSEG00000007107	polr2eb	78	72.067	Cynoglossus_semilaevis
ENSNGAG00000017344	-	96	72.626	ENSCVAG00000019940	polr2eb	85	72.626	Cyprinodon_variegatus
ENSNGAG00000017344	-	96	71.508	ENSDARG00000026183	polr2eb	85	71.508	Danio_rerio
ENSNGAG00000017344	-	96	74.302	ENSDNOG00000044994	POLR2E	79	74.302	Dasypus_novemcinctus
ENSNGAG00000017344	-	96	74.302	ENSDORG00000001154	Polr2e	85	74.302	Dipodomys_ordii
ENSNGAG00000017344	-	96	64.246	FBgn0033571	Rpb5	85	64.246	Drosophila_melanogaster
ENSNGAG00000017344	-	77	67.333	ENSEBUG00000010159	-	73	67.333	Eptatretus_burgeri
ENSNGAG00000017344	-	64	66.116	ENSEASG00005021615	POLR2E	51	66.116	Equus_asinus_asinus
ENSNGAG00000017344	-	96	74.302	ENSECAG00000011124	POLR2E	83	61.453	Equus_caballus
ENSNGAG00000017344	-	96	70.950	ENSELUG00000005815	POLR2E	85	70.950	Esox_lucius
ENSNGAG00000017344	-	96	70.391	ENSELUG00000020646	polr2e	85	70.391	Esox_lucius
ENSNGAG00000017344	-	96	74.860	ENSFCAG00000007318	POLR2E	85	74.860	Felis_catus
ENSNGAG00000017344	-	89	73.810	ENSFALG00000013986	POLR2E	87	73.810	Ficedula_albicollis
ENSNGAG00000017344	-	96	74.302	ENSFDAG00000014539	POLR2E	85	74.302	Fukomys_damarensis
ENSNGAG00000017344	-	96	72.626	ENSFHEG00000022398	polr2eb	85	72.626	Fundulus_heteroclitus
ENSNGAG00000017344	-	96	71.508	ENSGMOG00000007615	polr2eb	85	71.508	Gadus_morhua
ENSNGAG00000017344	-	96	74.302	ENSGALG00000002591	POLR2E	85	74.302	Gallus_gallus
ENSNGAG00000017344	-	96	73.184	ENSGAFG00000005087	polr2eb	85	73.184	Gambusia_affinis
ENSNGAG00000017344	-	96	70.950	ENSGACG00000013247	polr2eb	85	70.950	Gasterosteus_aculeatus
ENSNGAG00000017344	-	96	74.302	ENSGAGG00000008356	POLR2E	85	74.302	Gopherus_agassizii
ENSNGAG00000017344	-	96	74.302	ENSGGOG00000011267	POLR2E	85	74.302	Gorilla_gorilla
ENSNGAG00000017344	-	62	66.949	ENSHBUG00000011099	polr2eb	83	66.949	Haplochromis_burtoni
ENSNGAG00000017344	-	96	73.743	ENSHGLG00000013330	POLR2E	85	73.743	Heterocephalus_glaber_female
ENSNGAG00000017344	-	96	73.743	ENSHGLG00100011014	POLR2E	85	73.743	Heterocephalus_glaber_male
ENSNGAG00000017344	-	96	71.508	ENSHCOG00000000906	polr2eb	85	71.508	Hippocampus_comes
ENSNGAG00000017344	-	53	63.393	ENSHCOG00000012099	-	88	63.393	Hippocampus_comes
ENSNGAG00000017344	-	96	72.626	ENSIPUG00000019801	polr2e	85	72.626	Ictalurus_punctatus
ENSNGAG00000017344	-	96	74.302	ENSSTOG00000002853	POLR2E	85	74.302	Ictidomys_tridecemlineatus
ENSNGAG00000017344	-	80	69.444	ENSJJAG00000015812	-	97	69.444	Jaculus_jaculus
ENSNGAG00000017344	-	96	64.375	ENSJJAG00000003145	-	82	64.375	Jaculus_jaculus
ENSNGAG00000017344	-	96	75.419	ENSJJAG00000016595	-	85	75.419	Jaculus_jaculus
ENSNGAG00000017344	-	96	72.626	ENSKMAG00000005954	polr2eb	85	72.626	Kryptolebias_marmoratus
ENSNGAG00000017344	-	96	72.626	ENSLBEG00000024802	polr2eb	85	72.626	Labrus_bergylta
ENSNGAG00000017344	-	96	72.067	ENSLACG00000013686	POLR2E	85	72.067	Latimeria_chalumnae
ENSNGAG00000017344	-	81	72.903	ENSLOCG00000004599	POLR2E	96	72.903	Lepisosteus_oculatus
ENSNGAG00000017344	-	96	56.906	ENSLAFG00000025587	POLR2E	85	56.906	Loxodonta_africana
ENSNGAG00000017344	-	96	74.302	ENSMFAG00000002884	POLR2E	85	74.302	Macaca_fascicularis
ENSNGAG00000017344	-	96	74.302	ENSMMUG00000013927	POLR2E	85	74.302	Macaca_mulatta
ENSNGAG00000017344	-	96	74.302	ENSMNEG00000034046	-	85	74.302	Macaca_nemestrina
ENSNGAG00000017344	-	87	57.764	ENSMNEG00000033452	-	89	57.764	Macaca_nemestrina
ENSNGAG00000017344	-	89	72.667	ENSMLEG00000012405	POLR2E	81	72.667	Mandrillus_leucophaeus
ENSNGAG00000017344	-	96	72.626	ENSMAMG00000018703	polr2eb	85	72.626	Mastacembelus_armatus
ENSNGAG00000017344	-	96	73.184	ENSMZEG00005010796	polr2eb	90	73.184	Maylandia_zebra
ENSNGAG00000017344	-	96	72.778	ENSMGAG00000003769	POLR2E	85	72.778	Meleagris_gallopavo
ENSNGAG00000017344	-	85	66.901	ENSMAUG00000011003	-	80	66.901	Mesocricetus_auratus
ENSNGAG00000017344	-	89	74.556	ENSMAUG00000010125	-	87	74.850	Mesocricetus_auratus
ENSNGAG00000017344	-	96	74.302	ENSMICG00000013063	POLR2E	85	74.302	Microcebus_murinus
ENSNGAG00000017344	-	96	75.419	ENSMOCG00000013414	Polr2e	85	75.419	Microtus_ochrogaster
ENSNGAG00000017344	-	88	65.868	ENSMMOG00000001167	polr2eb	77	65.868	Mola_mola
ENSNGAG00000017344	-	96	58.659	ENSMMOG00000001161	polr2eb	83	58.659	Mola_mola
ENSNGAG00000017344	-	96	74.302	ENSMODG00000005494	POLR2E	85	74.302	Monodelphis_domestica
ENSNGAG00000017344	-	96	73.184	ENSMALG00000021888	polr2eb	85	73.184	Monopterus_albus
ENSNGAG00000017344	-	96	75.419	MGP_CAROLIEiJ_G0015561	Polr2e	85	75.419	Mus_caroli
ENSNGAG00000017344	-	96	75.419	ENSMUSG00000004667	Polr2e	85	75.419	Mus_musculus
ENSNGAG00000017344	-	96	75.419	MGP_PahariEiJ_G0030974	Polr2e	85	75.419	Mus_pahari
ENSNGAG00000017344	-	96	75.419	MGP_SPRETEiJ_G0016379	Polr2e	85	75.419	Mus_spretus
ENSNGAG00000017344	-	96	74.860	ENSMPUG00000008953	POLR2E	85	74.860	Mustela_putorius_furo
ENSNGAG00000017344	-	65	67.176	ENSMLUG00000006376	-	96	58.710	Myotis_lucifugus
ENSNGAG00000017344	-	96	74.302	ENSMLUG00000013193	POLR2E	85	74.302	Myotis_lucifugus
ENSNGAG00000017344	-	96	60.335	ENSNBRG00000022772	polr2eb	83	60.335	Neolamprologus_brichardi
ENSNGAG00000017344	-	95	58.683	ENSNLEG00000031364	-	84	58.683	Nomascus_leucogenys
ENSNGAG00000017344	-	96	70.000	ENSNLEG00000001207	-	85	70.000	Nomascus_leucogenys
ENSNGAG00000017344	-	96	69.832	ENSOPRG00000008331	POLR2E	85	69.832	Ochotona_princeps
ENSNGAG00000017344	-	96	73.837	ENSODEG00000007985	-	96	73.837	Octodon_degus
ENSNGAG00000017344	-	96	74.302	ENSODEG00000013230	-	85	74.302	Octodon_degus
ENSNGAG00000017344	-	96	51.124	ENSODEG00000011490	-	82	51.124	Octodon_degus
ENSNGAG00000017344	-	96	73.184	ENSONIG00000002519	polr2eb	85	73.184	Oreochromis_niloticus
ENSNGAG00000017344	-	96	73.184	ENSORLG00000015346	polr2eb	85	73.184	Oryzias_latipes
ENSNGAG00000017344	-	96	73.184	ENSORLG00020020700	polr2e	85	73.184	Oryzias_latipes_hni
ENSNGAG00000017344	-	96	73.184	ENSORLG00015016842	polr2e	85	73.184	Oryzias_latipes_hsok
ENSNGAG00000017344	-	96	72.626	ENSOMEG00000002709	polr2eb	85	72.626	Oryzias_melastigma
ENSNGAG00000017344	-	96	74.302	ENSOGAG00000012311	POLR2E	85	74.302	Otolemur_garnettii
ENSNGAG00000017344	-	96	74.302	ENSOARG00000010994	POLR2E	85	74.302	Ovis_aries
ENSNGAG00000017344	-	88	73.653	ENSPPAG00000003145	POLR2E	87	73.653	Pan_paniscus
ENSNGAG00000017344	-	96	74.860	ENSPPRG00000000777	POLR2E	85	74.860	Panthera_pardus
ENSNGAG00000017344	-	79	70.395	ENSPTIG00000012237	POLR2E	98	70.395	Panthera_tigris_altaica
ENSNGAG00000017344	-	96	74.302	ENSPTRG00000010183	POLR2E	85	74.302	Pan_troglodytes
ENSNGAG00000017344	-	96	74.302	ENSPANG00000018011	POLR2E	85	74.302	Papio_anubis
ENSNGAG00000017344	-	96	71.508	ENSPKIG00000009607	POLR2E	85	71.508	Paramormyrops_kingsleyae
ENSNGAG00000017344	-	96	71.508	ENSPKIG00000024123	POLR2E	85	71.508	Paramormyrops_kingsleyae
ENSNGAG00000017344	-	94	71.751	ENSPSIG00000002870	POLR2E	85	71.751	Pelodiscus_sinensis
ENSNGAG00000017344	-	96	59.777	ENSPMGG00000014354	polr2eb	83	59.777	Periophthalmus_magnuspinnatus
ENSNGAG00000017344	-	96	75.419	ENSPEMG00000023261	Polr2e	85	75.419	Peromyscus_maniculatus_bairdii
ENSNGAG00000017344	-	96	74.302	ENSPCIG00000007312	POLR2E	71	74.302	Phascolarctos_cinereus
ENSNGAG00000017344	-	96	73.184	ENSPFOG00000005734	polr2eb	85	73.184	Poecilia_formosa
ENSNGAG00000017344	-	96	73.184	ENSPLAG00000014496	polr2eb	85	73.184	Poecilia_latipinna
ENSNGAG00000017344	-	96	73.184	ENSPMEG00000008053	polr2eb	85	73.184	Poecilia_mexicana
ENSNGAG00000017344	-	96	73.184	ENSPREG00000006489	polr2eb	85	73.184	Poecilia_reticulata
ENSNGAG00000017344	-	96	66.111	ENSPPYG00000009305	POLR2E	85	66.111	Pongo_abelii
ENSNGAG00000017344	-	56	71.296	ENSPCAG00000016605	POLR2E	97	71.296	Procavia_capensis
ENSNGAG00000017344	-	96	74.302	ENSPCOG00000014491	POLR2E	85	74.302	Propithecus_coquereli
ENSNGAG00000017344	-	52	68.807	ENSPVAG00000007718	-	52	68.807	Pteropus_vampyrus
ENSNGAG00000017344	-	96	73.184	ENSPNYG00000019797	polr2eb	90	73.184	Pundamilia_nyererei
ENSNGAG00000017344	-	96	72.626	ENSPNAG00000026263	POLR2E	85	72.626	Pygocentrus_nattereri
ENSNGAG00000017344	-	96	75.419	ENSRNOG00000013545	Polr2e	85	75.419	Rattus_norvegicus
ENSNGAG00000017344	-	96	59.444	ENSRBIG00000027259	-	87	59.444	Rhinopithecus_bieti
ENSNGAG00000017344	-	96	74.302	ENSRBIG00000028726	-	85	74.302	Rhinopithecus_bieti
ENSNGAG00000017344	-	96	74.302	ENSRROG00000043763	POLR2E	85	74.302	Rhinopithecus_roxellana
ENSNGAG00000017344	-	100	34.211	YBR154C	RPB5	88	34.211	Saccharomyces_cerevisiae
ENSNGAG00000017344	-	96	74.302	ENSSBOG00000027241	POLR2E	85	74.302	Saimiri_boliviensis_boliviensis
ENSNGAG00000017344	-	96	74.302	ENSSHAG00000010690	POLR2E	85	74.302	Sarcophilus_harrisii
ENSNGAG00000017344	-	96	72.626	ENSSFOG00015006073	polr2e	85	72.626	Scleropages_formosus
ENSNGAG00000017344	-	96	72.626	ENSSMAG00000012782	polr2eb	85	72.626	Scophthalmus_maximus
ENSNGAG00000017344	-	96	72.626	ENSSDUG00000003352	polr2eb	85	72.626	Seriola_dumerili
ENSNGAG00000017344	-	96	72.626	ENSSLDG00000004965	polr2eb	85	72.626	Seriola_lalandi_dorsalis
ENSNGAG00000017344	-	96	72.626	ENSSPUG00000006114	POLR2E	85	72.626	Sphenodon_punctatus
ENSNGAG00000017344	-	96	72.626	ENSSPAG00000017556	polr2eb	85	72.626	Stegastes_partitus
ENSNGAG00000017344	-	96	74.302	ENSSSCG00000021472	POLR2E	85	74.302	Sus_scrofa
ENSNGAG00000017344	-	66	63.910	ENSTGUG00000000922	POLR2E	94	63.910	Taeniopygia_guttata
ENSNGAG00000017344	-	94	68.362	ENSTRUG00000018238	polr2eb	83	59.777	Takifugu_rubripes
ENSNGAG00000017344	-	96	72.626	ENSTNIG00000013187	polr2eb	85	72.626	Tetraodon_nigroviridis
ENSNGAG00000017344	-	96	73.743	ENSTTRG00000001484	POLR2E	85	73.743	Tursiops_truncatus
ENSNGAG00000017344	-	96	73.743	ENSUAMG00000009166	POLR2E	83	60.894	Ursus_americanus
ENSNGAG00000017344	-	96	73.184	ENSXETG00000003291	polr2e	85	73.184	Xenopus_tropicalis
ENSNGAG00000017344	-	96	60.335	ENSXCOG00000009197	polr2eb	83	60.335	Xiphophorus_couchianus
ENSNGAG00000017344	-	96	73.184	ENSXMAG00000026495	polr2eb	85	73.184	Xiphophorus_maculatus