EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000017537 (Gene tree)
Gene ID: 103745826
Gene Symbol: Rad54b
Alias: E130016E03Rik
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 105779 bases
Position: chrKL203412.1:1623213-1728991
Accession: 103745826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000016985	ResIII	PF04851.15	3.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000022607	-	2734	XM_008847835	ENSNGAP00000016985	901 (aa)	XP_008846057	UPI0004ED1A27

Gene Model

Click here to download ENSNGAG00000017537's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000017537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000017537	Rad54b	60	31.780	ENSNGAG00000016174	Ercc6l2	83	31.780
ENSNGAG00000017537	Rad54b	71	45.344	ENSNGAG00000024213	Rad54l	82	45.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000017537	Rad54b	99	83.479	ENSG00000197275	RAD54B	99	83.479	Homo_sapiens
ENSNGAG00000017537	Rad54b	81	87.517	ENSG00000265817	FSBP	99	87.517	Homo_sapiens
ENSNGAG00000017537	Rad54b	100	82.244	ENSAMEG00000005834	-	100	82.244	Ailuropoda_melanoleuca
ENSNGAG00000017537	Rad54b	99	54.675	ENSACIG00000013005	rad54b	99	54.675	Amphilophus_citrinellus
ENSNGAG00000017537	Rad54b	99	54.448	ENSAOCG00000008523	rad54b	99	54.448	Amphiprion_ocellaris
ENSNGAG00000017537	Rad54b	99	54.386	ENSAPEG00000001673	rad54b	99	54.386	Amphiprion_percula
ENSNGAG00000017537	Rad54b	99	53.905	ENSATEG00000001527	rad54b	99	53.905	Anabas_testudineus
ENSNGAG00000017537	Rad54b	99	67.172	ENSAPLG00000014366	-	99	67.172	Anas_platyrhynchos
ENSNGAG00000017537	Rad54b	89	69.145	ENSACAG00000003671	-	99	69.145	Anolis_carolinensis
ENSNGAG00000017537	Rad54b	72	85.429	ENSANAG00000019528	-	99	85.429	Aotus_nancymaae
ENSNGAG00000017537	Rad54b	99	54.355	ENSACLG00000007826	rad54b	99	54.465	Astatotilapia_calliptera
ENSNGAG00000017537	Rad54b	87	56.910	ENSAMXG00000039985	rad54b	95	56.646	Astyanax_mexicanus
ENSNGAG00000017537	Rad54b	100	80.916	ENSBTAG00000000632	RAD54B	100	80.916	Bos_taurus
ENSNGAG00000017537	Rad54b	80	36.096	WBGene00013792	Y116A8C.13	98	33.793	Caenorhabditis_elegans
ENSNGAG00000017537	Rad54b	99	81.838	ENSCJAG00000000080	-	99	85.460	Callithrix_jacchus
ENSNGAG00000017537	Rad54b	100	79.956	ENSCAFG00000009179	RAD54B	99	79.956	Canis_familiaris
ENSNGAG00000017537	Rad54b	100	79.630	ENSCAFG00020012084	-	99	79.630	Canis_lupus_dingo
ENSNGAG00000017537	Rad54b	100	81.243	ENSCHIG00000008230	-	100	81.243	Capra_hircus
ENSNGAG00000017537	Rad54b	100	83.424	ENSTSYG00000013234	-	100	83.424	Carlito_syrichta
ENSNGAG00000017537	Rad54b	99	81.078	ENSCPOG00000011643	-	99	81.078	Cavia_porcellus
ENSNGAG00000017537	Rad54b	99	82.237	ENSCCAG00000011754	-	99	85.577	Cebus_capucinus
ENSNGAG00000017537	Rad54b	99	82.932	ENSCATG00000030661	-	99	87.106	Cercocebus_atys
ENSNGAG00000017537	Rad54b	99	82.314	ENSCLAG00000010476	-	99	82.314	Chinchilla_lanigera
ENSNGAG00000017537	Rad54b	99	82.932	ENSCSAG00000012712	-	99	82.932	Chlorocebus_sabaeus
ENSNGAG00000017537	Rad54b	99	67.312	ENSCPBG00000003204	-	99	68.038	Chrysemys_picta_bellii
ENSNGAG00000017537	Rad54b	99	83.479	ENSCANG00000017939	-	99	87.517	Colobus_angolensis_palliatus
ENSNGAG00000017537	Rad54b	100	84.257	ENSCGRG00001020184	Rad54b	100	84.257	Cricetulus_griseus_chok1gshd
ENSNGAG00000017537	Rad54b	100	82.671	ENSCGRG00000016752	Rad54b	100	82.671	Cricetulus_griseus_crigri
ENSNGAG00000017537	Rad54b	99	54.324	ENSCSEG00000001601	rad54b	99	54.324	Cynoglossus_semilaevis
ENSNGAG00000017537	Rad54b	99	55.870	ENSCVAG00000009200	rad54b	99	55.870	Cyprinodon_variegatus
ENSNGAG00000017537	Rad54b	100	52.614	ENSDARG00000092134	rad54b	100	59.604	Danio_rerio
ENSNGAG00000017537	Rad54b	99	80.525	ENSDNOG00000015535	-	99	80.525	Dasypus_novemcinctus
ENSNGAG00000017537	Rad54b	100	82.147	ENSDORG00000002492	Rad54b	100	82.147	Dipodomys_ordii
ENSNGAG00000017537	Rad54b	86	78.272	ENSETEG00000010605	-	100	78.272	Echinops_telfairi
ENSNGAG00000017537	Rad54b	99	46.688	ENSEBUG00000009104	rad54b	99	46.688	Eptatretus_burgeri
ENSNGAG00000017537	Rad54b	97	81.644	ENSEASG00005004021	-	99	81.644	Equus_asinus_asinus
ENSNGAG00000017537	Rad54b	100	81.550	ENSECAG00000021949	-	99	81.550	Equus_caballus
ENSNGAG00000017537	Rad54b	90	80.838	ENSEEUG00000008056	-	80	80.838	Erinaceus_europaeus
ENSNGAG00000017537	Rad54b	99	52.904	ENSELUG00000009287	rad54b	99	53.079	Esox_lucius
ENSNGAG00000017537	Rad54b	100	81.808	ENSFCAG00000015513	-	100	86.202	Felis_catus
ENSNGAG00000017537	Rad54b	99	67.570	ENSFALG00000005467	-	99	67.570	Ficedula_albicollis
ENSNGAG00000017537	Rad54b	99	81.928	ENSFDAG00000020541	-	99	81.928	Fukomys_damarensis
ENSNGAG00000017537	Rad54b	88	57.855	ENSFHEG00000014382	rad54b	87	58.229	Fundulus_heteroclitus
ENSNGAG00000017537	Rad54b	87	56.195	ENSGMOG00000014774	rad54b	98	56.195	Gadus_morhua
ENSNGAG00000017537	Rad54b	99	67.172	ENSGALG00000043597	RAD54B	99	67.172	Gallus_gallus
ENSNGAG00000017537	Rad54b	99	54.874	ENSGAFG00000007901	rad54b	99	54.874	Gambusia_affinis
ENSNGAG00000017537	Rad54b	99	54.957	ENSGACG00000009128	rad54b	100	54.957	Gasterosteus_aculeatus
ENSNGAG00000017537	Rad54b	99	67.027	ENSGAGG00000018747	-	99	67.027	Gopherus_agassizii
ENSNGAG00000017537	Rad54b	100	83.097	ENSGGOG00000023516	-	100	83.097	Gorilla_gorilla
ENSNGAG00000017537	Rad54b	99	53.003	ENSHBUG00000016017	rad54b	99	53.003	Haplochromis_burtoni
ENSNGAG00000017537	Rad54b	100	80.803	ENSHGLG00000008263	RAD54B	99	80.803	Heterocephalus_glaber_female
ENSNGAG00000017537	Rad54b	100	79.957	ENSHGLG00100008108	-	99	79.957	Heterocephalus_glaber_male
ENSNGAG00000017537	Rad54b	99	52.723	ENSHCOG00000004764	rad54b	98	55.092	Hippocampus_comes
ENSNGAG00000017537	Rad54b	100	50.570	ENSIPUG00000018531	rad54b	99	50.570	Ictalurus_punctatus
ENSNGAG00000017537	Rad54b	99	81.015	ENSSTOG00000010791	-	99	81.015	Ictidomys_tridecemlineatus
ENSNGAG00000017537	Rad54b	100	82.533	ENSJJAG00000010314	Rad54b	100	82.533	Jaculus_jaculus
ENSNGAG00000017537	Rad54b	99	53.311	ENSKMAG00000004744	rad54b	99	53.311	Kryptolebias_marmoratus
ENSNGAG00000017537	Rad54b	83	68.924	ENSLACG00000000859	-	100	68.924	Latimeria_chalumnae
ENSNGAG00000017537	Rad54b	99	57.204	ENSLOCG00000010100	rad54b	99	57.311	Lepisosteus_oculatus
ENSNGAG00000017537	Rad54b	90	82.555	ENSLAFG00000015315	-	100	82.555	Loxodonta_africana
ENSNGAG00000017537	Rad54b	99	82.823	ENSMFAG00000031629	-	99	86.831	Macaca_fascicularis
ENSNGAG00000017537	Rad54b	99	82.823	ENSMMUG00000005659	-	99	82.823	Macaca_mulatta
ENSNGAG00000017537	Rad54b	99	83.133	ENSMNEG00000016408	-	99	83.133	Macaca_nemestrina
ENSNGAG00000017537	Rad54b	99	82.932	ENSMLEG00000006946	-	99	82.932	Mandrillus_leucophaeus
ENSNGAG00000017537	Rad54b	99	54.863	ENSMAMG00000012269	rad54b	99	54.863	Mastacembelus_armatus
ENSNGAG00000017537	Rad54b	99	53.109	ENSMZEG00005005281	rad54b	95	58.573	Maylandia_zebra
ENSNGAG00000017537	Rad54b	99	66.847	ENSMGAG00000012024	-	99	66.847	Meleagris_gallopavo
ENSNGAG00000017537	Rad54b	100	82.483	ENSMAUG00000013586	Rad54b	100	82.483	Mesocricetus_auratus
ENSNGAG00000017537	Rad54b	91	87.531	ENSMICG00000000754	-	93	87.531	Microcebus_murinus
ENSNGAG00000017537	Rad54b	100	81.929	ENSMOCG00000020035	Rad54b	99	81.929	Microtus_ochrogaster
ENSNGAG00000017537	Rad54b	99	54.895	ENSMMOG00000003394	rad54b	99	54.895	Mola_mola
ENSNGAG00000017537	Rad54b	90	77.160	ENSMODG00000007343	-	99	77.160	Monodelphis_domestica
ENSNGAG00000017537	Rad54b	72	58.499	ENSMALG00000001520	rad54b	99	58.499	Monopterus_albus
ENSNGAG00000017537	Rad54b	100	84.257	MGP_CAROLIEiJ_G0025810	Rad54b	100	84.257	Mus_caroli
ENSNGAG00000017537	Rad54b	100	84.146	ENSMUSG00000078773	Rad54b	100	84.146	Mus_musculus
ENSNGAG00000017537	Rad54b	100	84.018	MGP_PahariEiJ_G0023933	Rad54b	100	84.018	Mus_pahari
ENSNGAG00000017537	Rad54b	100	84.351	MGP_SPRETEiJ_G0026758	Rad54b	100	84.351	Mus_spretus
ENSNGAG00000017537	Rad54b	90	84.559	ENSMPUG00000008878	-	100	84.559	Mustela_putorius_furo
ENSNGAG00000017537	Rad54b	99	80.525	ENSMLUG00000008953	-	99	80.525	Myotis_lucifugus
ENSNGAG00000017537	Rad54b	99	54.355	ENSNBRG00000013394	rad54b	99	54.465	Neolamprologus_brichardi
ENSNGAG00000017537	Rad54b	99	83.807	ENSNLEG00000003062	-	99	87.517	Nomascus_leucogenys
ENSNGAG00000017537	Rad54b	72	74.564	ENSMEUG00000012426	-	70	75.000	Notamacropus_eugenii
ENSNGAG00000017537	Rad54b	100	80.109	ENSODEG00000019564	-	100	80.109	Octodon_degus
ENSNGAG00000017537	Rad54b	80	84.299	ENSODEG00000002650	-	96	83.994	Octodon_degus
ENSNGAG00000017537	Rad54b	99	54.171	ENSONIG00000006067	rad54b	99	54.171	Oreochromis_niloticus
ENSNGAG00000017537	Rad54b	84	75.231	ENSOANG00000011348	-	100	75.231	Ornithorhynchus_anatinus
ENSNGAG00000017537	Rad54b	100	80.459	ENSOCUG00000016478	-	99	80.459	Oryctolagus_cuniculus
ENSNGAG00000017537	Rad54b	99	54.140	ENSORLG00000008918	rad54b	99	61.550	Oryzias_latipes
ENSNGAG00000017537	Rad54b	71	61.550	ENSORLG00020012171	rad54b	99	61.550	Oryzias_latipes_hni
ENSNGAG00000017537	Rad54b	99	53.708	ENSORLG00015018536	rad54b	99	53.985	Oryzias_latipes_hsok
ENSNGAG00000017537	Rad54b	85	59.331	ENSOMEG00000004345	rad54b	99	59.331	Oryzias_melastigma
ENSNGAG00000017537	Rad54b	99	81.729	ENSOGAG00000007854	-	99	81.729	Otolemur_garnettii
ENSNGAG00000017537	Rad54b	90	84.230	ENSOARG00000007691	-	100	84.230	Ovis_aries
ENSNGAG00000017537	Rad54b	99	81.729	ENSPPAG00000029572	-	99	81.729	Pan_paniscus
ENSNGAG00000017537	Rad54b	100	82.135	ENSPPRG00000007571	-	100	86.339	Panthera_pardus
ENSNGAG00000017537	Rad54b	81	86.339	ENSPTIG00000012670	-	100	86.339	Panthera_tigris_altaica
ENSNGAG00000017537	Rad54b	99	83.260	ENSPTRG00000020427	-	99	87.380	Pan_troglodytes
ENSNGAG00000017537	Rad54b	99	83.042	ENSPANG00000019566	-	99	83.042	Papio_anubis
ENSNGAG00000017537	Rad54b	99	56.659	ENSPKIG00000014974	rad54b	99	56.659	Paramormyrops_kingsleyae
ENSNGAG00000017537	Rad54b	99	65.662	ENSPSIG00000002383	-	99	70.097	Pelodiscus_sinensis
ENSNGAG00000017537	Rad54b	100	84.257	ENSPEMG00000012133	Rad54b	100	84.257	Peromyscus_maniculatus_bairdii
ENSNGAG00000017537	Rad54b	88	58.032	ENSPMAG00000002916	rad54b	98	58.406	Petromyzon_marinus
ENSNGAG00000017537	Rad54b	92	76.386	ENSPCIG00000020151	-	95	76.386	Phascolarctos_cinereus
ENSNGAG00000017537	Rad54b	99	54.065	ENSPFOG00000023411	rad54b	99	54.074	Poecilia_formosa
ENSNGAG00000017537	Rad54b	99	54.488	ENSPLAG00000010430	rad54b	99	54.497	Poecilia_latipinna
ENSNGAG00000017537	Rad54b	99	55.055	ENSPMEG00000016873	rad54b	99	55.055	Poecilia_mexicana
ENSNGAG00000017537	Rad54b	99	55.470	ENSPREG00000018443	rad54b	99	55.470	Poecilia_reticulata
ENSNGAG00000017537	Rad54b	99	83.260	ENSPPYG00000018750	-	99	83.260	Pongo_abelii
ENSNGAG00000017537	Rad54b	99	83.917	ENSPCOG00000026845	-	99	87.517	Propithecus_coquereli
ENSNGAG00000017537	Rad54b	83	84.295	ENSPVAG00000000261	-	85	84.295	Pteropus_vampyrus
ENSNGAG00000017537	Rad54b	88	58.302	ENSPNYG00000018303	rad54b	96	58.302	Pundamilia_nyererei
ENSNGAG00000017537	Rad54b	99	53.152	ENSPNAG00000000295	rad54b	99	53.152	Pygocentrus_nattereri
ENSNGAG00000017537	Rad54b	100	80.931	ENSRNOG00000039949	Rad54b	100	80.931	Rattus_norvegicus
ENSNGAG00000017537	Rad54b	99	82.604	ENSRBIG00000020419	-	99	82.604	Rhinopithecus_bieti
ENSNGAG00000017537	Rad54b	99	82.604	ENSRROG00000039897	-	99	82.604	Rhinopithecus_roxellana
ENSNGAG00000017537	Rad54b	94	34.574	YBR073W	RDH54	94	34.255	Saccharomyces_cerevisiae
ENSNGAG00000017537	Rad54b	99	81.619	ENSSBOG00000028501	-	99	81.619	Saimiri_boliviensis_boliviensis
ENSNGAG00000017537	Rad54b	99	72.926	ENSSHAG00000017038	-	99	72.926	Sarcophilus_harrisii
ENSNGAG00000017537	Rad54b	64	64.348	ENSSFOG00015008483	rad54b	89	64.000	Scleropages_formosus
ENSNGAG00000017537	Rad54b	99	54.102	ENSSMAG00000018659	rad54b	99	54.102	Scophthalmus_maximus
ENSNGAG00000017537	Rad54b	99	53.602	ENSSDUG00000001122	rad54b	98	53.340	Seriola_dumerili
ENSNGAG00000017537	Rad54b	99	53.537	ENSSLDG00000013787	rad54b	99	53.537	Seriola_lalandi_dorsalis
ENSNGAG00000017537	Rad54b	99	66.924	ENSSPUG00000016497	-	99	66.924	Sphenodon_punctatus
ENSNGAG00000017537	Rad54b	99	55.077	ENSSPAG00000012800	rad54b	99	55.077	Stegastes_partitus
ENSNGAG00000017537	Rad54b	99	80.921	ENSSSCG00000006101	-	99	85.518	Sus_scrofa
ENSNGAG00000017537	Rad54b	99	66.196	ENSTGUG00000011880	-	99	66.196	Taeniopygia_guttata
ENSNGAG00000017537	Rad54b	99	53.165	ENSTRUG00000010015	rad54b	99	53.066	Takifugu_rubripes
ENSNGAG00000017537	Rad54b	100	77.863	ENSTTRG00000006312	-	100	77.863	Tursiops_truncatus
ENSNGAG00000017537	Rad54b	100	82.026	ENSUMAG00000016401	-	100	82.026	Ursus_maritimus
ENSNGAG00000017537	Rad54b	100	80.984	ENSVPAG00000003157	-	100	80.984	Vicugna_pacos
ENSNGAG00000017537	Rad54b	99	53.956	ENSXETG00000025924	rad54b	99	58.540	Xenopus_tropicalis
ENSNGAG00000017537	Rad54b	99	55.033	ENSXMAG00000013141	rad54b	99	55.033	Xiphophorus_maculatus