EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000017560 (Gene tree)
Gene ID: 103748370
Gene Symbol: Srsf6
Alias: 1210001E11Rik|Sfrs6
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 3555 bases
Position: chrKL204115.1:2348300-2351854
Accession: 103748370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000017008	RRM_1	PF00076.22	8.8e-33	1	2
ENSNGAP00000017008	RRM_1	PF00076.22	8.8e-33	2	2
ENSNGAP00000017014	RRM_1	PF00076.22	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000022631	-	1734	XM_008850986	ENSNGAP00000017008	335 (aa)	XP_008849208	UPI0004ED1522
ENSNGAT00000022637	-	408	-	ENSNGAP00000017014	135 (aa)	-	UPI000002B37D

Gene Model

Click here to download ENSNGAG00000017560's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG
ngi05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000017560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000017560	Srsf6	50	71.642	ENSNGAG00000010073	-	67	64.130
ENSNGAG00000017560	Srsf6	51	45.946	ENSNGAG00000012738	Srsf9	71	38.462
ENSNGAG00000017560	Srsf6	56	34.667	ENSNGAG00000019304	Rbm14	52	34.667
ENSNGAG00000017560	Srsf6	59	40.670	ENSNGAG00000011395	Srsf1	78	39.216
ENSNGAG00000017560	Srsf6	53	32.911	ENSNGAG00000011475	-	55	33.784
ENSNGAG00000017560	Srsf6	56	34.667	ENSNGAG00000012575	-	54	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000017560	Srsf6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSNGAG00000017560	Srsf6	58	93.590	ENSAPOG00000016635	-	84	81.618	Acanthochromis_polyacanthus
ENSNGAG00000017560	Srsf6	95	83.077	ENSAMEG00000003710	SRSF6	94	83.692	Ailuropoda_melanoleuca
ENSNGAG00000017560	Srsf6	89	68.350	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSNGAG00000017560	Srsf6	63	87.059	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSNGAG00000017560	Srsf6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSNGAG00000017560	Srsf6	65	82.955	ENSAOCG00000004309	-	60	68.831	Amphiprion_ocellaris
ENSNGAG00000017560	Srsf6	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSNGAG00000017560	Srsf6	63	84.706	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSNGAG00000017560	Srsf6	66	83.146	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSNGAG00000017560	Srsf6	95	80.556	ENSACAG00000002061	SRSF6	92	84.161	Anolis_carolinensis
ENSNGAG00000017560	Srsf6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSNGAG00000017560	Srsf6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSNGAG00000017560	Srsf6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSNGAG00000017560	Srsf6	55	93.243	ENSAMXG00000003101	-	52	83.249	Astyanax_mexicanus
ENSNGAG00000017560	Srsf6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSNGAG00000017560	Srsf6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSNGAG00000017560	Srsf6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSNGAG00000017560	Srsf6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSNGAG00000017560	Srsf6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSNGAG00000017560	Srsf6	99	94.706	ENSCHIG00000009148	-	99	94.706	Capra_hircus
ENSNGAG00000017560	Srsf6	94	79.503	ENSTSYG00000026476	SRSF6	93	77.778	Carlito_syrichta
ENSNGAG00000017560	Srsf6	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSNGAG00000017560	Srsf6	95	67.188	ENSCCAG00000018540	-	62	87.766	Cebus_capucinus
ENSNGAG00000017560	Srsf6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSNGAG00000017560	Srsf6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSNGAG00000017560	Srsf6	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSNGAG00000017560	Srsf6	99	97.337	ENSCSAG00000014022	SRSF6	99	97.337	Chlorocebus_sabaeus
ENSNGAG00000017560	Srsf6	99	80.882	ENSCHOG00000000561	SRSF6	99	80.882	Choloepus_hoffmanni
ENSNGAG00000017560	Srsf6	58	97.436	ENSCPBG00000018200	SRSF6	94	84.404	Chrysemys_picta_bellii
ENSNGAG00000017560	Srsf6	99	82.249	ENSCANG00000042529	-	98	82.249	Colobus_angolensis_palliatus
ENSNGAG00000017560	Srsf6	99	96.746	ENSCANG00000037774	-	99	96.746	Colobus_angolensis_palliatus
ENSNGAG00000017560	Srsf6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSNGAG00000017560	Srsf6	61	96.190	ENSCGRG00000006618	Srsf6	100	96.190	Cricetulus_griseus_crigri
ENSNGAG00000017560	Srsf6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSNGAG00000017560	Srsf6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSNGAG00000017560	Srsf6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSNGAG00000017560	Srsf6	95	93.210	ENSDNOG00000008410	SRSF6	94	93.827	Dasypus_novemcinctus
ENSNGAG00000017560	Srsf6	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSNGAG00000017560	Srsf6	94	90.312	ENSETEG00000006221	SRSF6	94	88.580	Echinops_telfairi
ENSNGAG00000017560	Srsf6	95	93.210	ENSEASG00005023429	SRSF6	94	94.753	Equus_asinus_asinus
ENSNGAG00000017560	Srsf6	95	93.210	ENSECAG00000023932	SRSF6	94	94.753	Equus_caballus
ENSNGAG00000017560	Srsf6	56	90.256	ENSEEUG00000002324	SRSF6	90	91.878	Erinaceus_europaeus
ENSNGAG00000017560	Srsf6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSNGAG00000017560	Srsf6	93	64.013	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSNGAG00000017560	Srsf6	99	95.000	ENSFCAG00000032814	SRSF6	99	95.000	Felis_catus
ENSNGAG00000017560	Srsf6	100	81.633	ENSFDAG00000012191	SRSF6	100	81.633	Fukomys_damarensis
ENSNGAG00000017560	Srsf6	90	70.820	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSNGAG00000017560	Srsf6	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSNGAG00000017560	Srsf6	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSNGAG00000017560	Srsf6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSNGAG00000017560	Srsf6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSNGAG00000017560	Srsf6	98	61.194	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSNGAG00000017560	Srsf6	58	97.436	ENSGAGG00000003238	SRSF6	94	84.404	Gopherus_agassizii
ENSNGAG00000017560	Srsf6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSNGAG00000017560	Srsf6	56	89.474	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSNGAG00000017560	Srsf6	89	78.595	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSNGAG00000017560	Srsf6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSNGAG00000017560	Srsf6	100	81.924	ENSHGLG00100005043	SRSF6	100	81.924	Heterocephalus_glaber_male
ENSNGAG00000017560	Srsf6	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSNGAG00000017560	Srsf6	58	92.308	ENSIPUG00000004776	-	64	86.413	Ictalurus_punctatus
ENSNGAG00000017560	Srsf6	53	84.091	ENSIPUG00000016856	SRSF6	51	81.006	Ictalurus_punctatus
ENSNGAG00000017560	Srsf6	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSNGAG00000017560	Srsf6	56	92.670	ENSJJAG00000020690	Srsf6	91	93.264	Jaculus_jaculus
ENSNGAG00000017560	Srsf6	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSNGAG00000017560	Srsf6	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSNGAG00000017560	Srsf6	93	81.646	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSNGAG00000017560	Srsf6	70	91.632	ENSLAFG00000006682	SRSF6	89	92.576	Loxodonta_africana
ENSNGAG00000017560	Srsf6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSNGAG00000017560	Srsf6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSNGAG00000017560	Srsf6	100	95.627	ENSMNEG00000038270	-	100	95.627	Macaca_nemestrina
ENSNGAG00000017560	Srsf6	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSNGAG00000017560	Srsf6	61	94.860	ENSMLEG00000031524	SRSF6	100	94.860	Mandrillus_leucophaeus
ENSNGAG00000017560	Srsf6	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSNGAG00000017560	Srsf6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSNGAG00000017560	Srsf6	98	58.333	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSNGAG00000017560	Srsf6	56	89.474	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSNGAG00000017560	Srsf6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSNGAG00000017560	Srsf6	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSNGAG00000017560	Srsf6	61	96.190	ENSMOCG00000018738	Srsf6	100	96.190	Microtus_ochrogaster
ENSNGAG00000017560	Srsf6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSNGAG00000017560	Srsf6	58	97.436	ENSMODG00000003107	SRSF6	95	88.923	Monodelphis_domestica
ENSNGAG00000017560	Srsf6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSNGAG00000017560	Srsf6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSNGAG00000017560	Srsf6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSNGAG00000017560	Srsf6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSNGAG00000017560	Srsf6	85	96.875	ENSMPUG00000017692	SRSF6	99	96.875	Mustela_putorius_furo
ENSNGAG00000017560	Srsf6	94	78.571	ENSMLUG00000016618	SRSF6	94	79.321	Myotis_lucifugus
ENSNGAG00000017560	Srsf6	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSNGAG00000017560	Srsf6	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSNGAG00000017560	Srsf6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSNGAG00000017560	Srsf6	58	97.436	ENSMEUG00000014615	SRSF6	95	92.414	Notamacropus_eugenii
ENSNGAG00000017560	Srsf6	70	93.305	ENSOPRG00000002017	-	89	94.323	Ochotona_princeps
ENSNGAG00000017560	Srsf6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSNGAG00000017560	Srsf6	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSNGAG00000017560	Srsf6	58	93.590	ENSONIG00000001925	-	52	88.172	Oreochromis_niloticus
ENSNGAG00000017560	Srsf6	76	58.498	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSNGAG00000017560	Srsf6	86	79.739	ENSOCUG00000009785	-	98	83.108	Oryctolagus_cuniculus
ENSNGAG00000017560	Srsf6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSNGAG00000017560	Srsf6	98	68.613	ENSOGAG00000014468	SRSF6	94	94.753	Otolemur_garnettii
ENSNGAG00000017560	Srsf6	94	90.994	ENSOARG00000003117	SRSF6	94	91.667	Ovis_aries
ENSNGAG00000017560	Srsf6	100	95.930	ENSPPAG00000034327	-	100	95.930	Pan_paniscus
ENSNGAG00000017560	Srsf6	91	83.819	ENSPPAG00000043131	-	100	86.408	Pan_paniscus
ENSNGAG00000017560	Srsf6	99	95.000	ENSPPRG00000008917	SRSF6	99	95.000	Panthera_pardus
ENSNGAG00000017560	Srsf6	56	92.308	ENSPTIG00000019153	SRSF6	90	93.333	Panthera_tigris_altaica
ENSNGAG00000017560	Srsf6	91	83.819	ENSPTRG00000046274	-	100	86.408	Pan_troglodytes
ENSNGAG00000017560	Srsf6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSNGAG00000017560	Srsf6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSNGAG00000017560	Srsf6	93	69.182	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSNGAG00000017560	Srsf6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSNGAG00000017560	Srsf6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSNGAG00000017560	Srsf6	90	72.368	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSNGAG00000017560	Srsf6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSNGAG00000017560	Srsf6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSNGAG00000017560	Srsf6	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSNGAG00000017560	Srsf6	90	63.009	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSNGAG00000017560	Srsf6	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSNGAG00000017560	Srsf6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSNGAG00000017560	Srsf6	100	96.221	ENSPPYG00000011019	SRSF6	100	96.221	Pongo_abelii
ENSNGAG00000017560	Srsf6	58	98.718	ENSPCAG00000010954	SRSF6	96	91.900	Procavia_capensis
ENSNGAG00000017560	Srsf6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSNGAG00000017560	Srsf6	95	92.857	ENSPVAG00000015232	SRSF6	94	94.099	Pteropus_vampyrus
ENSNGAG00000017560	Srsf6	56	89.474	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSNGAG00000017560	Srsf6	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSNGAG00000017560	Srsf6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSNGAG00000017560	Srsf6	100	96.460	ENSRNOG00000006380	Srsf6	100	96.460	Rattus_norvegicus
ENSNGAG00000017560	Srsf6	100	96.296	ENSRBIG00000041414	SRSF6	100	96.296	Rhinopithecus_bieti
ENSNGAG00000017560	Srsf6	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSNGAG00000017560	Srsf6	94	70.219	ENSSBOG00000034078	-	54	77.348	Saimiri_boliviensis_boliviensis
ENSNGAG00000017560	Srsf6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSNGAG00000017560	Srsf6	58	97.436	ENSSHAG00000012805	SRSF6	95	88.615	Sarcophilus_harrisii
ENSNGAG00000017560	Srsf6	90	64.759	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSNGAG00000017560	Srsf6	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSNGAG00000017560	Srsf6	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSNGAG00000017560	Srsf6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSNGAG00000017560	Srsf6	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSNGAG00000017560	Srsf6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSNGAG00000017560	Srsf6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSNGAG00000017560	Srsf6	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSNGAG00000017560	Srsf6	69	94.068	ENSSARG00000001602	SRSF6	88	94.714	Sorex_araneus
ENSNGAG00000017560	Srsf6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSNGAG00000017560	Srsf6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSNGAG00000017560	Srsf6	98	61.871	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSNGAG00000017560	Srsf6	99	95.000	ENSSSCG00000007362	SRSF6	99	95.000	Sus_scrofa
ENSNGAG00000017560	Srsf6	94	82.353	ENSTGUG00000003455	SRSF6	94	83.792	Taeniopygia_guttata
ENSNGAG00000017560	Srsf6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSNGAG00000017560	Srsf6	90	70.861	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSNGAG00000017560	Srsf6	85	91.034	ENSTBEG00000013448	SRSF6	92	92.042	Tupaia_belangeri
ENSNGAG00000017560	Srsf6	68	94.043	ENSTTRG00000015410	SRSF6	88	94.760	Tursiops_truncatus
ENSNGAG00000017560	Srsf6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSNGAG00000017560	Srsf6	56	92.308	ENSUMAG00000001154	SRSF6	90	93.333	Ursus_maritimus
ENSNGAG00000017560	Srsf6	76	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSNGAG00000017560	Srsf6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSNGAG00000017560	Srsf6	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus