EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000017714 (Gene tree)
Gene ID: 103734800
Gene Symbol: Pnldc1
Alias: LOC240023
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 22978 bases
Position: chrKL200981.1:568121-591098
Accession: 103734800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000017224	CAF1	PF04857.20	2.6e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000022852	-	1786	XM_008833868	ENSNGAP00000017224	532 (aa)	XP_008832090	-

Gene Model

Click here to download ENSNGAG00000017714's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000017714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000017714	Pnldc1	99	87.358	ENSG00000146453	PNLDC1	99	87.358	Homo_sapiens
ENSNGAG00000017714	Pnldc1	99	86.553	ENSAMEG00000015371	PNLDC1	99	86.553	Ailuropoda_melanoleuca
ENSNGAG00000017714	Pnldc1	95	59.608	ENSAPLG00000007014	PNLDC1	97	59.608	Anas_platyrhynchos
ENSNGAG00000017714	Pnldc1	99	60.075	ENSACAG00000013667	PNLDC1	99	60.075	Anolis_carolinensis
ENSNGAG00000017714	Pnldc1	99	86.817	ENSANAG00000034713	PNLDC1	100	87.476	Aotus_nancymaae
ENSNGAG00000017714	Pnldc1	95	87.078	ENSBTAG00000015166	PNLDC1	95	87.078	Bos_taurus
ENSNGAG00000017714	Pnldc1	99	85.499	ENSCJAG00000011865	PNLDC1	100	85.499	Callithrix_jacchus
ENSNGAG00000017714	Pnldc1	99	88.136	ENSCAFG00000000740	PNLDC1	100	88.136	Canis_familiaris
ENSNGAG00000017714	Pnldc1	99	85.929	ENSCAFG00020017742	PNLDC1	100	85.929	Canis_lupus_dingo
ENSNGAG00000017714	Pnldc1	99	84.615	ENSCHIG00000003141	PNLDC1	100	84.615	Capra_hircus
ENSNGAG00000017714	Pnldc1	99	83.992	ENSTSYG00000005606	PNLDC1	100	83.992	Carlito_syrichta
ENSNGAG00000017714	Pnldc1	99	63.089	ENSCAPG00000011893	PNLDC1	100	63.089	Cavia_aperea
ENSNGAG00000017714	Pnldc1	99	80.639	ENSCPOG00000019565	PNLDC1	100	80.639	Cavia_porcellus
ENSNGAG00000017714	Pnldc1	99	86.817	ENSCCAG00000026232	PNLDC1	100	86.817	Cebus_capucinus
ENSNGAG00000017714	Pnldc1	99	87.194	ENSCATG00000033196	PNLDC1	100	87.194	Cercocebus_atys
ENSNGAG00000017714	Pnldc1	99	86.038	ENSCLAG00000003228	PNLDC1	99	86.038	Chinchilla_lanigera
ENSNGAG00000017714	Pnldc1	95	86.051	ENSCSAG00000012478	PNLDC1	98	86.051	Chlorocebus_sabaeus
ENSNGAG00000017714	Pnldc1	96	65.625	ENSCPBG00000004050	PNLDC1	100	65.625	Chrysemys_picta_bellii
ENSNGAG00000017714	Pnldc1	95	86.759	ENSCANG00000043076	PNLDC1	97	86.759	Colobus_angolensis_palliatus
ENSNGAG00000017714	Pnldc1	100	69.549	ENSCGRG00001011981	-	99	69.549	Cricetulus_griseus_chok1gshd
ENSNGAG00000017714	Pnldc1	100	86.654	ENSCGRG00001007470	-	100	86.654	Cricetulus_griseus_chok1gshd
ENSNGAG00000017714	Pnldc1	100	86.654	ENSCGRG00000010221	-	100	86.654	Cricetulus_griseus_crigri
ENSNGAG00000017714	Pnldc1	100	71.805	ENSCGRG00000003103	-	99	71.805	Cricetulus_griseus_crigri
ENSNGAG00000017714	Pnldc1	99	85.338	ENSDNOG00000013709	PNLDC1	100	85.338	Dasypus_novemcinctus
ENSNGAG00000017714	Pnldc1	99	81.461	ENSDORG00000011517	Pnldc1	99	89.457	Dipodomys_ordii
ENSNGAG00000017714	Pnldc1	93	75.709	ENSETEG00000007587	PNLDC1	99	75.709	Echinops_telfairi
ENSNGAG00000017714	Pnldc1	98	30.410	ENSEBUG00000008118	PNLDC1	99	30.410	Eptatretus_burgeri
ENSNGAG00000017714	Pnldc1	99	79.813	ENSEASG00005019029	PNLDC1	100	79.813	Equus_asinus_asinus
ENSNGAG00000017714	Pnldc1	99	87.382	ENSECAG00000012898	PNLDC1	100	87.382	Equus_caballus
ENSNGAG00000017714	Pnldc1	67	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSNGAG00000017714	Pnldc1	99	87.947	ENSFCAG00000002848	PNLDC1	100	87.947	Felis_catus
ENSNGAG00000017714	Pnldc1	94	58.847	ENSFALG00000012081	PNLDC1	99	58.847	Ficedula_albicollis
ENSNGAG00000017714	Pnldc1	99	86.817	ENSFDAG00000021334	PNLDC1	100	86.817	Fukomys_damarensis
ENSNGAG00000017714	Pnldc1	79	61.045	ENSGALG00000011624	PNLDC1	82	61.045	Gallus_gallus
ENSNGAG00000017714	Pnldc1	99	66.415	ENSGAGG00000015276	PNLDC1	100	67.769	Gopherus_agassizii
ENSNGAG00000017714	Pnldc1	99	87.194	ENSGGOG00000014077	PNLDC1	100	87.194	Gorilla_gorilla
ENSNGAG00000017714	Pnldc1	99	87.382	ENSHGLG00000006889	PNLDC1	100	87.382	Heterocephalus_glaber_female
ENSNGAG00000017714	Pnldc1	99	87.382	ENSHGLG00100018275	PNLDC1	100	87.382	Heterocephalus_glaber_male
ENSNGAG00000017714	Pnldc1	99	89.981	ENSSTOG00000005595	PNLDC1	99	89.981	Ictidomys_tridecemlineatus
ENSNGAG00000017714	Pnldc1	99	83.871	ENSJJAG00000009937	Pnldc1	99	83.871	Jaculus_jaculus
ENSNGAG00000017714	Pnldc1	59	86.349	ENSLAFG00000030189	PNLDC1	92	86.349	Loxodonta_africana
ENSNGAG00000017714	Pnldc1	99	87.194	ENSMFAG00000041296	PNLDC1	100	87.194	Macaca_fascicularis
ENSNGAG00000017714	Pnldc1	99	87.194	ENSMMUG00000004181	PNLDC1	100	87.194	Macaca_mulatta
ENSNGAG00000017714	Pnldc1	99	87.006	ENSMNEG00000034271	PNLDC1	100	87.006	Macaca_nemestrina
ENSNGAG00000017714	Pnldc1	99	83.992	ENSMLEG00000044059	PNLDC1	100	83.992	Mandrillus_leucophaeus
ENSNGAG00000017714	Pnldc1	95	59.252	ENSMGAG00000012470	PNLDC1	97	59.252	Meleagris_gallopavo
ENSNGAG00000017714	Pnldc1	99	68.679	ENSMAUG00000012298	Pnldc1	100	68.679	Mesocricetus_auratus
ENSNGAG00000017714	Pnldc1	99	86.064	ENSMICG00000008021	PNLDC1	100	86.064	Microcebus_murinus
ENSNGAG00000017714	Pnldc1	99	92.683	ENSMOCG00000014287	Pnldc1	100	92.683	Microtus_ochrogaster
ENSNGAG00000017714	Pnldc1	99	75.992	ENSMODG00000007420	PNLDC1	99	75.992	Monodelphis_domestica
ENSNGAG00000017714	Pnldc1	99	94.350	MGP_CAROLIEiJ_G0021045	Pnldc1	100	94.350	Mus_caroli
ENSNGAG00000017714	Pnldc1	99	94.162	ENSMUSG00000073460	Pnldc1	100	95.556	Mus_musculus
ENSNGAG00000017714	Pnldc1	99	94.162	MGP_PahariEiJ_G0023361	Pnldc1	100	94.162	Mus_pahari
ENSNGAG00000017714	Pnldc1	99	93.974	MGP_SPRETEiJ_G0021975	Pnldc1	100	93.974	Mus_spretus
ENSNGAG00000017714	Pnldc1	99	87.689	ENSMPUG00000004920	PNLDC1	99	87.689	Mustela_putorius_furo
ENSNGAG00000017714	Pnldc1	99	85.687	ENSMLUG00000000747	PNLDC1	100	85.687	Myotis_lucifugus
ENSNGAG00000017714	Pnldc1	97	85.078	ENSNLEG00000011282	PNLDC1	99	85.078	Nomascus_leucogenys
ENSNGAG00000017714	Pnldc1	54	66.319	ENSMEUG00000014042	-	100	66.319	Notamacropus_eugenii
ENSNGAG00000017714	Pnldc1	60	63.125	ENSMEUG00000011926	-	64	63.125	Notamacropus_eugenii
ENSNGAG00000017714	Pnldc1	79	86.364	ENSOPRG00000003813	PNLDC1	79	86.364	Ochotona_princeps
ENSNGAG00000017714	Pnldc1	99	86.252	ENSODEG00000008047	PNLDC1	100	86.252	Octodon_degus
ENSNGAG00000017714	Pnldc1	100	58.989	ENSOANG00000012199	PNLDC1	100	60.038	Ornithorhynchus_anatinus
ENSNGAG00000017714	Pnldc1	99	87.194	ENSOCUG00000013867	PNLDC1	100	87.194	Oryctolagus_cuniculus
ENSNGAG00000017714	Pnldc1	99	87.902	ENSOGAG00000007331	PNLDC1	100	87.902	Otolemur_garnettii
ENSNGAG00000017714	Pnldc1	99	84.746	ENSOARG00000004585	PNLDC1	100	84.746	Ovis_aries
ENSNGAG00000017714	Pnldc1	99	86.817	ENSPPAG00000026651	PNLDC1	100	86.817	Pan_paniscus
ENSNGAG00000017714	Pnldc1	99	87.947	ENSPPRG00000012854	PNLDC1	100	87.947	Panthera_pardus
ENSNGAG00000017714	Pnldc1	99	82.955	ENSPTIG00000011501	PNLDC1	99	82.955	Panthera_tigris_altaica
ENSNGAG00000017714	Pnldc1	99	86.817	ENSPTRG00000018762	PNLDC1	100	86.817	Pan_troglodytes
ENSNGAG00000017714	Pnldc1	99	87.382	ENSPANG00000022009	PNLDC1	100	87.382	Papio_anubis
ENSNGAG00000017714	Pnldc1	100	94.549	ENSPEMG00000016301	Pnldc1	100	94.549	Peromyscus_maniculatus_bairdii
ENSNGAG00000017714	Pnldc1	86	30.567	ENSPMAG00000003956	parn	90	30.769	Petromyzon_marinus
ENSNGAG00000017714	Pnldc1	83	78.132	ENSPCIG00000023412	PNLDC1	100	78.132	Phascolarctos_cinereus
ENSNGAG00000017714	Pnldc1	99	81.579	ENSPPYG00000017148	PNLDC1	100	81.579	Pongo_abelii
ENSNGAG00000017714	Pnldc1	99	77.170	ENSPCAG00000014169	PNLDC1	99	77.170	Procavia_capensis
ENSNGAG00000017714	Pnldc1	99	86.629	ENSPCOG00000025722	PNLDC1	100	86.629	Propithecus_coquereli
ENSNGAG00000017714	Pnldc1	72	91.688	ENSPVAG00000005325	PNLDC1	73	91.688	Pteropus_vampyrus
ENSNGAG00000017714	Pnldc1	99	94.162	ENSRNOG00000023140	Pnldc1	100	94.162	Rattus_norvegicus
ENSNGAG00000017714	Pnldc1	99	87.006	ENSRBIG00000033806	PNLDC1	100	87.006	Rhinopithecus_bieti
ENSNGAG00000017714	Pnldc1	95	87.352	ENSRROG00000043919	PNLDC1	97	87.352	Rhinopithecus_roxellana
ENSNGAG00000017714	Pnldc1	99	86.817	ENSSBOG00000019135	PNLDC1	100	86.817	Saimiri_boliviensis_boliviensis
ENSNGAG00000017714	Pnldc1	96	76.817	ENSSHAG00000015192	PNLDC1	98	76.817	Sarcophilus_harrisii
ENSNGAG00000017714	Pnldc1	54	66.783	ENSSPUG00000004627	PNLDC1	99	65.625	Sphenodon_punctatus
ENSNGAG00000017714	Pnldc1	96	84.118	ENSSSCG00000004046	PNLDC1	99	84.118	Sus_scrofa
ENSNGAG00000017714	Pnldc1	91	59.794	ENSTGUG00000011418	PNLDC1	99	59.794	Taeniopygia_guttata
ENSNGAG00000017714	Pnldc1	96	75.490	ENSTBEG00000009131	PNLDC1	98	75.490	Tupaia_belangeri
ENSNGAG00000017714	Pnldc1	73	83.161	ENSTTRG00000010409	PNLDC1	73	83.161	Tursiops_truncatus
ENSNGAG00000017714	Pnldc1	99	73.978	ENSUAMG00000015783	PNLDC1	99	73.978	Ursus_americanus
ENSNGAG00000017714	Pnldc1	94	79.331	ENSUMAG00000011903	PNLDC1	99	79.331	Ursus_maritimus
ENSNGAG00000017714	Pnldc1	96	89.432	ENSVVUG00000006586	PNLDC1	99	87.680	Vulpes_vulpes