EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000017807 (Gene tree)
Gene ID: 103741798
Gene Symbol: Msi2
Alias: Musashi2|msi2h
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 379241 bases
Position: chrKL202498.1:4188777-4568017
Accession: 103741798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000017354	RRM_1	PF00076.22	3.4e-34	1	2
ENSNGAP00000017354	RRM_1	PF00076.22	3.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000022984	-	1041	XM_008842718	ENSNGAP00000017354	346 (aa)	XP_008840940	UPI00000285CD

Gene Model

Click here to download ENSNGAG00000017807's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000017807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000017807	Msi2	51	43.243	ENSNGAG00000012951	Rbm3	87	43.243
ENSNGAG00000017807	Msi2	51	33.520	ENSNGAG00000017486	-	83	30.033
ENSNGAG00000017807	Msi2	53	31.720	ENSNGAG00000017267	-	60	31.720
ENSNGAG00000017807	Msi2	50	44.186	ENSNGAG00000021745	Hnrnpa3	60	43.299
ENSNGAG00000017807	Msi2	50	41.279	ENSNGAG00000015156	-	82	40.230
ENSNGAG00000017807	Msi2	53	49.727	ENSNGAG00000015740	Hnrnpdl	59	41.569
ENSNGAG00000017807	Msi2	54	48.663	ENSNGAG00000021642	Hnrnpab	69	47.549
ENSNGAG00000017807	Msi2	94	70.659	ENSNGAG00000014508	Msi1	93	68.389
ENSNGAG00000017807	Msi2	58	45.894	ENSNGAG00000013451	Hnrnpd	67	45.894
ENSNGAG00000017807	Msi2	54	36.054	ENSNGAG00000000408	-	63	35.443
ENSNGAG00000017807	Msi2	78	33.562	ENSNGAG00000023416	-	53	32.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000017807	Msi2	100	94.509	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSNGAG00000017807	Msi2	100	87.896	ENSAPOG00000001658	msi2a	100	87.464	Acanthochromis_polyacanthus
ENSNGAG00000017807	Msi2	94	100.000	ENSAMEG00000002697	MSI2	99	100.000	Ailuropoda_melanoleuca
ENSNGAG00000017807	Msi2	100	74.490	ENSACIG00000009475	msi2a	100	74.490	Amphilophus_citrinellus
ENSNGAG00000017807	Msi2	55	76.000	ENSAOCG00000014822	msi2a	69	76.000	Amphiprion_ocellaris
ENSNGAG00000017807	Msi2	100	87.896	ENSAPEG00000007706	msi2a	100	87.464	Amphiprion_percula
ENSNGAG00000017807	Msi2	100	87.896	ENSATEG00000010498	msi2a	100	87.464	Anabas_testudineus
ENSNGAG00000017807	Msi2	94	87.500	ENSATEG00000003301	-	100	87.500	Anabas_testudineus
ENSNGAG00000017807	Msi2	94	71.105	ENSACAG00000005452	MSI2	68	97.826	Anolis_carolinensis
ENSNGAG00000017807	Msi2	100	94.509	ENSANAG00000037827	MSI2	100	94.509	Aotus_nancymaae
ENSNGAG00000017807	Msi2	100	87.608	ENSACLG00000007752	msi2a	100	87.179	Astatotilapia_calliptera
ENSNGAG00000017807	Msi2	100	85.838	ENSAMXG00000010474	msi2b	100	85.838	Astyanax_mexicanus
ENSNGAG00000017807	Msi2	100	88.473	ENSAMXG00000032796	msi2a	100	85.260	Astyanax_mexicanus
ENSNGAG00000017807	Msi2	94	94.154	ENSBTAG00000004406	MSI2	97	94.154	Bos_taurus
ENSNGAG00000017807	Msi2	68	60.643	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSNGAG00000017807	Msi2	100	94.509	ENSCJAG00000013998	MSI2	100	94.509	Callithrix_jacchus
ENSNGAG00000017807	Msi2	94	98.746	ENSCAFG00020025620	MSI2	81	98.746	Canis_lupus_dingo
ENSNGAG00000017807	Msi2	100	93.642	ENSCHIG00000016580	MSI2	100	93.642	Capra_hircus
ENSNGAG00000017807	Msi2	94	89.667	ENSCPOG00000034042	MSI2	99	89.667	Cavia_porcellus
ENSNGAG00000017807	Msi2	100	94.509	ENSCCAG00000033927	MSI2	100	94.509	Cebus_capucinus
ENSNGAG00000017807	Msi2	100	93.353	ENSCATG00000040879	MSI2	100	93.353	Cercocebus_atys
ENSNGAG00000017807	Msi2	100	99.711	ENSCLAG00000014325	MSI2	100	99.711	Chinchilla_lanigera
ENSNGAG00000017807	Msi2	100	94.509	ENSCSAG00000005633	MSI2	100	94.509	Chlorocebus_sabaeus
ENSNGAG00000017807	Msi2	71	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSNGAG00000017807	Msi2	94	93.688	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSNGAG00000017807	Msi2	60	72.000	ENSCING00000018579	-	97	50.000	Ciona_intestinalis
ENSNGAG00000017807	Msi2	62	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSNGAG00000017807	Msi2	94	100.000	ENSCANG00000036414	MSI2	100	100.000	Colobus_angolensis_palliatus
ENSNGAG00000017807	Msi2	100	94.524	ENSCGRG00001013330	Msi2	100	94.524	Cricetulus_griseus_chok1gshd
ENSNGAG00000017807	Msi2	94	99.693	ENSCGRG00000003141	Msi2	100	99.693	Cricetulus_griseus_crigri
ENSNGAG00000017807	Msi2	54	73.370	ENSCSEG00000013549	msi2a	100	73.370	Cynoglossus_semilaevis
ENSNGAG00000017807	Msi2	100	75.434	ENSCSEG00000003266	-	100	75.434	Cynoglossus_semilaevis
ENSNGAG00000017807	Msi2	79	69.340	ENSCSEG00000013557	msi2a	83	67.925	Cynoglossus_semilaevis
ENSNGAG00000017807	Msi2	100	87.608	ENSCVAG00000017075	msi2a	100	87.179	Cyprinodon_variegatus
ENSNGAG00000017807	Msi2	93	88.509	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSNGAG00000017807	Msi2	100	79.381	ENSDARG00000033901	msi2a	100	79.381	Danio_rerio
ENSNGAG00000017807	Msi2	94	94.118	ENSDNOG00000014501	MSI2	100	94.118	Dasypus_novemcinctus
ENSNGAG00000017807	Msi2	79	81.395	ENSDORG00000005394	Msi2	84	81.395	Dipodomys_ordii
ENSNGAG00000017807	Msi2	97	59.104	FBgn0260943	Rbp6	88	67.808	Drosophila_melanogaster
ENSNGAG00000017807	Msi2	64	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSNGAG00000017807	Msi2	89	68.810	ENSEBUG00000006732	msi2a	87	68.489	Eptatretus_burgeri
ENSNGAG00000017807	Msi2	94	89.320	ENSEASG00005002965	MSI2	97	89.143	Equus_asinus_asinus
ENSNGAG00000017807	Msi2	100	97.175	ENSECAG00000011435	MSI2	100	97.175	Equus_caballus
ENSNGAG00000017807	Msi2	83	79.705	ENSEEUG00000007810	MSI2	100	79.705	Erinaceus_europaeus
ENSNGAG00000017807	Msi2	100	84.393	ENSELUG00000011747	msi2a	100	84.393	Esox_lucius
ENSNGAG00000017807	Msi2	100	87.143	ENSELUG00000001361	msi2b	100	87.143	Esox_lucius
ENSNGAG00000017807	Msi2	54	79.487	ENSFCAG00000033787	-	82	79.487	Felis_catus
ENSNGAG00000017807	Msi2	100	94.509	ENSFCAG00000041686	MSI2	100	94.509	Felis_catus
ENSNGAG00000017807	Msi2	94	100.000	ENSFDAG00000016118	MSI2	100	100.000	Fukomys_damarensis
ENSNGAG00000017807	Msi2	100	87.608	ENSFHEG00000000084	msi2a	96	92.763	Fundulus_heteroclitus
ENSNGAG00000017807	Msi2	53	92.308	ENSGMOG00000007596	-	100	92.308	Gadus_morhua
ENSNGAG00000017807	Msi2	100	96.243	ENSGALG00000005567	MSI2	100	96.243	Gallus_gallus
ENSNGAG00000017807	Msi2	96	75.444	ENSGAFG00000006974	msi2a	90	93.377	Gambusia_affinis
ENSNGAG00000017807	Msi2	94	96.053	ENSGAGG00000016542	MSI2	100	96.053	Gopherus_agassizii
ENSNGAG00000017807	Msi2	94	100.000	ENSGGOG00000013182	MSI2	100	100.000	Gorilla_gorilla
ENSNGAG00000017807	Msi2	100	87.608	ENSHBUG00000020800	msi2a	100	87.179	Haplochromis_burtoni
ENSNGAG00000017807	Msi2	100	90.751	ENSHGLG00000012444	MSI2	100	90.751	Heterocephalus_glaber_female
ENSNGAG00000017807	Msi2	76	100.000	ENSHGLG00100003744	MSI2	100	100.000	Heterocephalus_glaber_male
ENSNGAG00000017807	Msi2	97	85.207	ENSHCOG00000000266	msi2a	97	84.795	Hippocampus_comes
ENSNGAG00000017807	Msi2	76	80.989	ENSHCOG00000017241	-	77	81.557	Hippocampus_comes
ENSNGAG00000017807	Msi2	100	82.370	ENSIPUG00000021097	msi2a	100	82.370	Ictalurus_punctatus
ENSNGAG00000017807	Msi2	96	89.189	ENSIPUG00000003732	msi2b	100	81.792	Ictalurus_punctatus
ENSNGAG00000017807	Msi2	94	89.667	ENSSTOG00000007884	MSI2	99	89.667	Ictidomys_tridecemlineatus
ENSNGAG00000017807	Msi2	76	88.889	ENSJJAG00000006292	-	100	88.406	Jaculus_jaculus
ENSNGAG00000017807	Msi2	96	86.186	ENSKMAG00000009494	msi2a	96	86.446	Kryptolebias_marmoratus
ENSNGAG00000017807	Msi2	100	83.237	ENSLBEG00000007061	msi2a	100	83.237	Labrus_bergylta
ENSNGAG00000017807	Msi2	94	68.915	ENSLBEG00000026223	-	100	68.915	Labrus_bergylta
ENSNGAG00000017807	Msi2	100	82.171	ENSLOCG00000004675	msi2b	100	83.740	Lepisosteus_oculatus
ENSNGAG00000017807	Msi2	94	100.000	ENSMFAG00000003775	MSI2	100	100.000	Macaca_fascicularis
ENSNGAG00000017807	Msi2	94	100.000	ENSMMUG00000002069	MSI2	100	100.000	Macaca_mulatta
ENSNGAG00000017807	Msi2	100	94.509	ENSMNEG00000045275	MSI2	100	94.509	Macaca_nemestrina
ENSNGAG00000017807	Msi2	94	100.000	ENSMLEG00000033888	MSI2	100	100.000	Mandrillus_leucophaeus
ENSNGAG00000017807	Msi2	96	86.866	ENSMAMG00000002488	-	99	92.053	Mastacembelus_armatus
ENSNGAG00000017807	Msi2	100	84.943	ENSMAMG00000010503	msi2a	100	85.511	Mastacembelus_armatus
ENSNGAG00000017807	Msi2	100	87.283	ENSMZEG00005007676	msi2a	100	87.283	Maylandia_zebra
ENSNGAG00000017807	Msi2	100	99.712	ENSMAUG00000003862	Msi2	100	99.712	Mesocricetus_auratus
ENSNGAG00000017807	Msi2	100	76.657	ENSMICG00000032913	-	100	75.216	Microcebus_murinus
ENSNGAG00000017807	Msi2	100	94.509	ENSMICG00000013598	-	100	94.509	Microcebus_murinus
ENSNGAG00000017807	Msi2	100	100.000	ENSMOCG00000005820	Msi2	100	100.000	Microtus_ochrogaster
ENSNGAG00000017807	Msi2	90	81.459	ENSMMOG00000008348	msi2a	91	82.622	Mola_mola
ENSNGAG00000017807	Msi2	76	98.551	ENSMODG00000014790	MSI2	100	98.551	Monodelphis_domestica
ENSNGAG00000017807	Msi2	100	87.896	ENSMALG00000000071	msi2a	100	92.810	Monopterus_albus
ENSNGAG00000017807	Msi2	100	100.000	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSNGAG00000017807	Msi2	100	100.000	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSNGAG00000017807	Msi2	100	100.000	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSNGAG00000017807	Msi2	100	100.000	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSNGAG00000017807	Msi2	94	94.462	ENSMPUG00000015377	MSI2	97	94.462	Mustela_putorius_furo
ENSNGAG00000017807	Msi2	94	94.154	ENSMLUG00000007865	MSI2	97	94.154	Myotis_lucifugus
ENSNGAG00000017807	Msi2	100	82.948	ENSNBRG00000014596	msi2a	92	93.421	Neolamprologus_brichardi
ENSNGAG00000017807	Msi2	94	100.000	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSNGAG00000017807	Msi2	64	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSNGAG00000017807	Msi2	100	99.711	ENSODEG00000011974	MSI2	100	99.711	Octodon_degus
ENSNGAG00000017807	Msi2	55	93.377	ENSONIG00000001972	msi2a	84	93.377	Oreochromis_niloticus
ENSNGAG00000017807	Msi2	93	95.745	ENSOANG00000005667	MSI2	77	95.745	Ornithorhynchus_anatinus
ENSNGAG00000017807	Msi2	94	94.462	ENSOCUG00000010440	MSI2	97	94.462	Oryctolagus_cuniculus
ENSNGAG00000017807	Msi2	96	87.087	ENSORLG00000009671	msi2a	95	87.349	Oryzias_latipes
ENSNGAG00000017807	Msi2	94	88.650	ENSORLG00020021556	msi2a	95	88.182	Oryzias_latipes_hni
ENSNGAG00000017807	Msi2	96	87.087	ENSORLG00015004592	msi2a	95	87.349	Oryzias_latipes_hsok
ENSNGAG00000017807	Msi2	100	81.792	ENSOMEG00000000146	msi2a	98	86.520	Oryzias_melastigma
ENSNGAG00000017807	Msi2	94	90.154	ENSOGAG00000005621	MSI2	99	90.154	Otolemur_garnettii
ENSNGAG00000017807	Msi2	94	100.000	ENSPPAG00000037697	MSI2	100	100.000	Pan_paniscus
ENSNGAG00000017807	Msi2	94	94.462	ENSPPRG00000001848	MSI2	91	99.103	Panthera_pardus
ENSNGAG00000017807	Msi2	70	78.512	ENSPTIG00000021873	-	92	78.512	Panthera_tigris_altaica
ENSNGAG00000017807	Msi2	94	100.000	ENSPTIG00000021678	MSI2	96	100.000	Panthera_tigris_altaica
ENSNGAG00000017807	Msi2	94	100.000	ENSPTRG00000009437	MSI2	100	100.000	Pan_troglodytes
ENSNGAG00000017807	Msi2	100	94.509	ENSPANG00000022319	MSI2	100	94.509	Papio_anubis
ENSNGAG00000017807	Msi2	100	81.452	ENSPKIG00000007038	-	100	80.376	Paramormyrops_kingsleyae
ENSNGAG00000017807	Msi2	100	76.296	ENSPSIG00000008618	MSI2	87	96.269	Pelodiscus_sinensis
ENSNGAG00000017807	Msi2	100	82.659	ENSPMGG00000005888	msi2a	100	82.659	Periophthalmus_magnuspinnatus
ENSNGAG00000017807	Msi2	100	95.198	ENSPCIG00000006063	MSI2	100	95.198	Phascolarctos_cinereus
ENSNGAG00000017807	Msi2	54	90.476	ENSPFOG00000019337	MSI2	92	90.476	Poecilia_formosa
ENSNGAG00000017807	Msi2	55	89.510	ENSPLAG00000000436	msi2a	76	90.141	Poecilia_latipinna
ENSNGAG00000017807	Msi2	55	79.021	ENSPMEG00000013247	msi2a	80	79.021	Poecilia_mexicana
ENSNGAG00000017807	Msi2	99	80.925	ENSPREG00000000881	msi2a	99	80.925	Poecilia_reticulata
ENSNGAG00000017807	Msi2	94	89.844	ENSPPYG00000008244	-	100	89.844	Pongo_abelii
ENSNGAG00000017807	Msi2	74	65.625	ENSPCAG00000010552	MSI2	100	65.625	Procavia_capensis
ENSNGAG00000017807	Msi2	94	85.531	ENSPVAG00000017053	MSI2	100	85.531	Pteropus_vampyrus
ENSNGAG00000017807	Msi2	100	87.283	ENSPNYG00000018393	msi2a	100	87.283	Pundamilia_nyererei
ENSNGAG00000017807	Msi2	100	88.473	ENSPNAG00000014957	msi2a	100	86.127	Pygocentrus_nattereri
ENSNGAG00000017807	Msi2	100	85.303	ENSPNAG00000000844	msi2b	100	82.948	Pygocentrus_nattereri
ENSNGAG00000017807	Msi2	94	93.919	ENSRNOG00000025338	Msi2	100	93.919	Rattus_norvegicus
ENSNGAG00000017807	Msi2	94	100.000	ENSSBOG00000026425	MSI2	100	100.000	Saimiri_boliviensis_boliviensis
ENSNGAG00000017807	Msi2	94	98.765	ENSSHAG00000008672	MSI2	100	98.765	Sarcophilus_harrisii
ENSNGAG00000017807	Msi2	100	62.687	ENSSFOG00015012168	msi2b	82	82.041	Scleropages_formosus
ENSNGAG00000017807	Msi2	94	84.615	ENSSFOG00015021687	-	97	82.154	Scleropages_formosus
ENSNGAG00000017807	Msi2	100	87.896	ENSSMAG00000018484	msi2a	100	87.464	Scophthalmus_maximus
ENSNGAG00000017807	Msi2	100	87.896	ENSSDUG00000014507	msi2a	100	87.464	Seriola_dumerili
ENSNGAG00000017807	Msi2	100	82.081	ENSSDUG00000021968	-	99	91.391	Seriola_dumerili
ENSNGAG00000017807	Msi2	100	83.237	ENSSLDG00000017172	msi2a	100	83.237	Seriola_lalandi_dorsalis
ENSNGAG00000017807	Msi2	55	93.671	ENSSPUG00000000913	-	94	93.671	Sphenodon_punctatus
ENSNGAG00000017807	Msi2	100	77.778	ENSSPAG00000017793	msi2a	100	77.493	Stegastes_partitus
ENSNGAG00000017807	Msi2	100	97.175	ENSSSCG00000038505	MSI2	100	97.175	Sus_scrofa
ENSNGAG00000017807	Msi2	76	99.034	ENSTGUG00000008452	MSI2	100	99.034	Taeniopygia_guttata
ENSNGAG00000017807	Msi2	100	82.153	ENSTRUG00000021248	msi2a	100	82.153	Takifugu_rubripes
ENSNGAG00000017807	Msi2	70	82.231	ENSTBEG00000001241	MSI2	73	82.231	Tupaia_belangeri
ENSNGAG00000017807	Msi2	94	84.375	ENSTTRG00000002189	MSI2	100	84.375	Tursiops_truncatus
ENSNGAG00000017807	Msi2	94	94.462	ENSUAMG00000000700	MSI2	97	94.462	Ursus_americanus
ENSNGAG00000017807	Msi2	90	86.219	ENSUMAG00000000505	MSI2	95	86.219	Ursus_maritimus
ENSNGAG00000017807	Msi2	53	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSNGAG00000017807	Msi2	100	99.711	ENSVVUG00000011783	MSI2	100	99.711	Vulpes_vulpes
ENSNGAG00000017807	Msi2	100	77.979	ENSXCOG00000006113	msi2a	100	77.979	Xiphophorus_couchianus
ENSNGAG00000017807	Msi2	100	87.608	ENSXMAG00000000608	msi2a	100	87.179	Xiphophorus_maculatus