EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000017946 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 2250 bases
Position: chrKL203914.1:11585712-11587961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000017557	RRM_1	PF00076.22	2.5e-53	1	3
ENSNGAP00000017557	RRM_1	PF00076.22	2.5e-53	2	3
ENSNGAP00000017557	RRM_1	PF00076.22	2.5e-53	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000023189	-	2175	-	ENSNGAP00000017557	724 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000017946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000017946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000017946	-	100	91.722	ENSNGAG00000006480	-	100	92.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000017946	-	100	78.449	ENSG00000106344	RBM28	100	92.500	Homo_sapiens
ENSNGAG00000017946	-	57	54.545	ENSAPOG00000015512	rbm28	100	51.369	Acanthochromis_polyacanthus
ENSNGAG00000017946	-	100	88.043	ENSAMEG00000004776	RBM28	92	88.043	Ailuropoda_melanoleuca
ENSNGAG00000017946	-	55	54.074	ENSACIG00000023153	rbm28	100	50.109	Amphilophus_citrinellus
ENSNGAG00000017946	-	57	52.759	ENSAOCG00000000462	rbm28	100	50.973	Amphiprion_ocellaris
ENSNGAG00000017946	-	57	52.097	ENSAPEG00000012996	rbm28	100	50.775	Amphiprion_percula
ENSNGAG00000017946	-	58	49.251	ENSATEG00000001672	rbm28	100	46.835	Anabas_testudineus
ENSNGAG00000017946	-	100	78.940	ENSANAG00000033922	RBM28	100	92.500	Aotus_nancymaae
ENSNGAG00000017946	-	100	48.338	ENSACLG00000025024	rbm28	100	49.681	Astatotilapia_calliptera
ENSNGAG00000017946	-	57	57.981	ENSAMXG00000000763	rbm28	99	59.427	Astyanax_mexicanus
ENSNGAG00000017946	-	100	76.831	ENSBTAG00000017001	RBM28	100	92.500	Bos_taurus
ENSNGAG00000017946	-	100	76.903	ENSCJAG00000017731	RBM28	100	92.500	Callithrix_jacchus
ENSNGAG00000017946	-	100	77.926	ENSCAFG00000001667	RBM28	100	78.191	Canis_familiaris
ENSNGAG00000017946	-	100	77.926	ENSCAFG00020021648	RBM28	100	78.191	Canis_lupus_dingo
ENSNGAG00000017946	-	100	76.627	ENSCHIG00000014146	RBM28	100	77.291	Capra_hircus
ENSNGAG00000017946	-	100	76.178	ENSTSYG00000002892	RBM28	100	87.500	Carlito_syrichta
ENSNGAG00000017946	-	83	59.512	ENSCAPG00000013218	RBM28	99	59.804	Cavia_aperea
ENSNGAG00000017946	-	100	77.704	ENSCPOG00000006253	RBM28	100	77.836	Cavia_porcellus
ENSNGAG00000017946	-	100	77.866	ENSCCAG00000035105	RBM28	100	92.500	Cebus_capucinus
ENSNGAG00000017946	-	100	78.609	ENSCATG00000040497	RBM28	100	78.609	Cercocebus_atys
ENSNGAG00000017946	-	100	76.291	ENSCLAG00000003707	RBM28	100	76.159	Chinchilla_lanigera
ENSNGAG00000017946	-	100	78.261	ENSCSAG00000010161	RBM28	100	78.656	Chlorocebus_sabaeus
ENSNGAG00000017946	-	56	83.871	ENSCHOG00000001994	-	63	83.871	Choloepus_hoffmanni
ENSNGAG00000017946	-	81	92.500	ENSCANG00000038397	RBM28	100	72.776	Colobus_angolensis_palliatus
ENSNGAG00000017946	-	65	79.637	ENSCGRG00001021278	Rbm28	100	77.238	Cricetulus_griseus_chok1gshd
ENSNGAG00000017946	-	100	78.899	ENSCGRG00000005098	Rbm28	100	78.899	Cricetulus_griseus_crigri
ENSNGAG00000017946	-	100	48.571	ENSCSEG00000004212	rbm28	100	49.935	Cynoglossus_semilaevis
ENSNGAG00000017946	-	57	51.474	ENSCVAG00000010493	rbm28	99	47.126	Cyprinodon_variegatus
ENSNGAG00000017946	-	100	45.413	ENSDARG00000025332	rbm28	100	46.512	Danio_rerio
ENSNGAG00000017946	-	100	76.517	ENSDNOG00000001124	RBM28	100	76.913	Dasypus_novemcinctus
ENSNGAG00000017946	-	65	75.403	ENSDORG00000004184	Rbm28	97	75.403	Dipodomys_ordii
ENSNGAG00000017946	-	71	39.205	FBgn0260456	CG4806	96	34.808	Drosophila_melanogaster
ENSNGAG00000017946	-	100	68.675	ENSETEG00000007130	RBM28	99	68.809	Echinops_telfairi
ENSNGAG00000017946	-	86	45.433	ENSEBUG00000004419	rbm28	98	40.552	Eptatretus_burgeri
ENSNGAG00000017946	-	100	77.705	ENSEASG00005008528	RBM28	100	78.227	Equus_asinus_asinus
ENSNGAG00000017946	-	100	77.474	ENSECAG00000007745	RBM28	100	77.995	Equus_caballus
ENSNGAG00000017946	-	100	70.735	ENSEEUG00000002389	RBM28	100	70.735	Erinaceus_europaeus
ENSNGAG00000017946	-	100	50.064	ENSELUG00000020602	rbm28	100	50.000	Esox_lucius
ENSNGAG00000017946	-	100	78.313	ENSFCAG00000000946	RBM28	100	92.500	Felis_catus
ENSNGAG00000017946	-	100	79.733	ENSFDAG00000010169	RBM28	100	80.533	Fukomys_damarensis
ENSNGAG00000017946	-	90	53.494	ENSGMOG00000007091	rbm28	99	46.540	Gadus_morhua
ENSNGAG00000017946	-	57	52.928	ENSGAFG00000004802	rbm28	97	53.829	Gambusia_affinis
ENSNGAG00000017946	-	57	54.098	ENSGACG00000012612	rbm28	100	49.396	Gasterosteus_aculeatus
ENSNGAG00000017946	-	79	74.176	ENSGAGG00000008873	RBM28	87	69.347	Gopherus_agassizii
ENSNGAG00000017946	-	95	77.531	ENSGGOG00000004644	RBM28	97	77.947	Gorilla_gorilla
ENSNGAG00000017946	-	90	49.715	ENSHBUG00000009611	rbm28	99	50.206	Haplochromis_burtoni
ENSNGAG00000017946	-	100	80.697	ENSHGLG00000005409	RBM28	100	80.697	Heterocephalus_glaber_female
ENSNGAG00000017946	-	100	80.697	ENSHGLG00100016458	RBM28	100	80.697	Heterocephalus_glaber_male
ENSNGAG00000017946	-	55	49.265	ENSIPUG00000007103	rbm28	93	45.905	Ictalurus_punctatus
ENSNGAG00000017946	-	100	78.721	ENSSTOG00000002169	RBM28	100	78.721	Ictidomys_tridecemlineatus
ENSNGAG00000017946	-	100	72.691	ENSJJAG00000022400	Rbm28	100	73.087	Jaculus_jaculus
ENSNGAG00000017946	-	57	54.110	ENSKMAG00000013348	rbm28	99	49.007	Kryptolebias_marmoratus
ENSNGAG00000017946	-	57	53.273	ENSLBEG00000012998	rbm28	100	47.429	Labrus_bergylta
ENSNGAG00000017946	-	76	54.367	ENSLACG00000010485	-	100	55.615	Latimeria_chalumnae
ENSNGAG00000017946	-	100	60.000	ENSLOCG00000015541	rbm28	84	60.825	Lepisosteus_oculatus
ENSNGAG00000017946	-	100	74.637	ENSLAFG00000010717	RBM28	100	74.737	Loxodonta_africana
ENSNGAG00000017946	-	100	78.215	ENSMFAG00000031036	RBM28	100	78.609	Macaca_fascicularis
ENSNGAG00000017946	-	100	78.113	ENSMMUG00000007250	RBM28	100	90.000	Macaca_mulatta
ENSNGAG00000017946	-	100	77.778	ENSMNEG00000036970	RBM28	100	78.179	Macaca_nemestrina
ENSNGAG00000017946	-	84	80.000	ENSMLEG00000037717	RBM28	100	80.000	Mandrillus_leucophaeus
ENSNGAG00000017946	-	100	48.969	ENSMAMG00000008525	rbm28	100	50.777	Mastacembelus_armatus
ENSNGAG00000017946	-	93	47.131	ENSMZEG00005019625	rbm28	100	49.931	Maylandia_zebra
ENSNGAG00000017946	-	100	76.554	ENSMAUG00000002263	Rbm28	100	76.554	Mesocricetus_auratus
ENSNGAG00000017946	-	93	75.208	ENSMICG00000000107	RBM28	100	75.346	Microcebus_murinus
ENSNGAG00000017946	-	100	79.122	ENSMOCG00000014615	Rbm28	100	78.989	Microtus_ochrogaster
ENSNGAG00000017946	-	57	54.087	ENSMMOG00000008600	rbm28	100	51.634	Mola_mola
ENSNGAG00000017946	-	100	66.623	ENSMODG00000015151	RBM28	100	68.325	Monodelphis_domestica
ENSNGAG00000017946	-	57	52.941	ENSMALG00000006419	rbm28	100	47.355	Monopterus_albus
ENSNGAG00000017946	-	100	79.470	MGP_CAROLIEiJ_G0028162	Rbm28	100	79.470	Mus_caroli
ENSNGAG00000017946	-	100	79.416	ENSMUSG00000029701	Rbm28	100	79.416	Mus_musculus
ENSNGAG00000017946	-	100	79.630	MGP_PahariEiJ_G0021920	Rbm28	100	79.630	Mus_pahari
ENSNGAG00000017946	-	100	79.814	MGP_SPRETEiJ_G0029162	Rbm28	100	80.080	Mus_spretus
ENSNGAG00000017946	-	100	76.285	ENSMPUG00000006511	RBM28	100	76.153	Mustela_putorius_furo
ENSNGAG00000017946	-	100	77.690	ENSMLUG00000002186	RBM28	100	78.084	Myotis_lucifugus
ENSNGAG00000017946	-	100	77.386	ENSNLEG00000012307	RBM28	100	92.500	Nomascus_leucogenys
ENSNGAG00000017946	-	81	81.481	ENSMEUG00000009611	RBM28	91	81.481	Notamacropus_eugenii
ENSNGAG00000017946	-	90	73.025	ENSOPRG00000015140	RBM28	87	73.025	Ochotona_princeps
ENSNGAG00000017946	-	77	78.141	ENSODEG00000013217	-	84	79.397	Octodon_degus
ENSNGAG00000017946	-	100	75.337	ENSODEG00000003213	-	100	76.415	Octodon_degus
ENSNGAG00000017946	-	58	53.229	ENSONIG00000014924	rbm28	100	49.805	Oreochromis_niloticus
ENSNGAG00000017946	-	100	60.606	ENSOANG00000000815	-	100	61.235	Ornithorhynchus_anatinus
ENSNGAG00000017946	-	100	75.228	ENSOCUG00000003009	RBM28	100	75.228	Oryctolagus_cuniculus
ENSNGAG00000017946	-	99	48.462	ENSORLG00000009636	rbm28	99	49.277	Oryzias_latipes
ENSNGAG00000017946	-	57	53.636	ENSORLG00020002123	rbm28	99	49.734	Oryzias_latipes_hni
ENSNGAG00000017946	-	86	58.373	ENSORLG00015015030	rbm28	97	58.373	Oryzias_latipes_hsok
ENSNGAG00000017946	-	58	55.654	ENSOMEG00000007801	rbm28	100	50.255	Oryzias_melastigma
ENSNGAG00000017946	-	81	87.500	ENSOGAG00000006011	RBM28	100	87.500	Otolemur_garnettii
ENSNGAG00000017946	-	100	77.793	ENSOARG00000002547	RBM28	100	77.926	Ovis_aries
ENSNGAG00000017946	-	100	78.244	ENSPPAG00000041730	RBM28	100	92.500	Pan_paniscus
ENSNGAG00000017946	-	100	77.674	ENSPPRG00000004420	RBM28	100	92.500	Panthera_pardus
ENSNGAG00000017946	-	100	78.313	ENSPTIG00000008550	RBM28	100	92.500	Panthera_tigris_altaica
ENSNGAG00000017946	-	100	78.244	ENSPTRG00000019659	RBM28	100	92.500	Pan_troglodytes
ENSNGAG00000017946	-	100	78.039	ENSPANG00000022295	RBM28	100	90.000	Papio_anubis
ENSNGAG00000017946	-	95	54.714	ENSPKIG00000023453	rbm28	99	47.724	Paramormyrops_kingsleyae
ENSNGAG00000017946	-	100	48.143	ENSPMGG00000012840	rbm28	100	48.148	Periophthalmus_magnuspinnatus
ENSNGAG00000017946	-	100	77.025	ENSPEMG00000020673	Rbm28	100	77.424	Peromyscus_maniculatus_bairdii
ENSNGAG00000017946	-	100	66.846	ENSPCIG00000012810	RBM28	100	68.048	Phascolarctos_cinereus
ENSNGAG00000017946	-	57	53.153	ENSPFOG00000018209	rbm28	100	47.458	Poecilia_formosa
ENSNGAG00000017946	-	56	52.982	ENSPLAG00000016078	rbm28	96	47.556	Poecilia_latipinna
ENSNGAG00000017946	-	57	53.258	ENSPMEG00000004292	rbm28	100	47.984	Poecilia_mexicana
ENSNGAG00000017946	-	56	52.715	ENSPREG00000014287	rbm28	99	47.718	Poecilia_reticulata
ENSNGAG00000017946	-	100	79.051	ENSPPYG00000017975	RBM28	100	79.315	Pongo_abelii
ENSNGAG00000017946	-	74	69.458	ENSPCAG00000008223	RBM28	82	69.458	Procavia_capensis
ENSNGAG00000017946	-	100	76.953	ENSPCOG00000016797	RBM28	100	92.500	Propithecus_coquereli
ENSNGAG00000017946	-	76	88.235	ENSPVAG00000005443	RBM28	72	88.235	Pteropus_vampyrus
ENSNGAG00000017946	-	100	48.338	ENSPNYG00000014003	rbm28	100	50.129	Pundamilia_nyererei
ENSNGAG00000017946	-	100	76.556	ENSRNOG00000005468	Rbm28	100	76.689	Rattus_norvegicus
ENSNGAG00000017946	-	100	77.618	ENSRBIG00000033990	RBM28	100	92.500	Rhinopithecus_bieti
ENSNGAG00000017946	-	100	77.457	ENSRROG00000040747	RBM28	100	92.500	Rhinopithecus_roxellana
ENSNGAG00000017946	-	85	75.131	ENSSBOG00000012308	RBM28	100	75.131	Saimiri_boliviensis_boliviensis
ENSNGAG00000017946	-	96	63.223	ENSSHAG00000017017	RBM28	99	62.500	Sarcophilus_harrisii
ENSNGAG00000017946	-	68	48.479	ENSSDUG00000014270	rbm28	97	52.390	Seriola_dumerili
ENSNGAG00000017946	-	58	54.646	ENSSLDG00000020099	rbm28	100	48.329	Seriola_lalandi_dorsalis
ENSNGAG00000017946	-	77	81.111	ENSSARG00000008303	RBM28	81	81.111	Sorex_araneus
ENSNGAG00000017946	-	66	69.118	ENSSPUG00000000838	RBM28	79	69.118	Sphenodon_punctatus
ENSNGAG00000017946	-	57	54.054	ENSSPAG00000023305	rbm28	100	48.974	Stegastes_partitus
ENSNGAG00000017946	-	100	77.086	ENSSSCG00000031847	RBM28	100	77.351	Sus_scrofa
ENSNGAG00000017946	-	99	47.984	ENSTNIG00000017962	rbm28	99	48.047	Tetraodon_nigroviridis
ENSNGAG00000017946	-	86	79.882	ENSTBEG00000012749	RBM28	86	79.882	Tupaia_belangeri
ENSNGAG00000017946	-	100	72.288	ENSTTRG00000013647	RBM28	100	73.072	Tursiops_truncatus
ENSNGAG00000017946	-	100	70.171	ENSUAMG00000006949	RBM28	100	70.565	Ursus_americanus
ENSNGAG00000017946	-	100	76.913	ENSUMAG00000005997	RBM28	100	77.045	Ursus_maritimus
ENSNGAG00000017946	-	87	69.160	ENSVPAG00000008304	RBM28	87	69.160	Vicugna_pacos
ENSNGAG00000017946	-	100	77.793	ENSVVUG00000007270	RBM28	100	77.689	Vulpes_vulpes
ENSNGAG00000017946	-	99	51.584	ENSXETG00000009271	rbm28	99	52.218	Xenopus_tropicalis
ENSNGAG00000017946	-	57	50.917	ENSXCOG00000020357	rbm28	99	48.441	Xiphophorus_couchianus
ENSNGAG00000017946	-	57	50.790	ENSXMAG00000004415	rbm28	99	46.997	Xiphophorus_maculatus