EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNGAG00000018006 (Gene tree)
Gene ID
103747298
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Nannospalax_galili
Status
putative
Strand
Minus strand
Length
23971 bases
Position
chrKL203847.1:812439-836409
Accession
103747298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNGAP00000017645Fox-1_CPF12414.81.1e-4111
ENSNGAP00000017647Fox-1_CPF12414.81.2e-4111
ENSNGAP00000017639Fox-1_CPF12414.81.2e-4111
ENSNGAP00000017639RRM_1PF00076.221e-1811
ENSNGAP00000017647RRM_1PF00076.221.1e-1811
ENSNGAP00000017645RRM_1PF00076.220.0001911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNGAT00000023278-990-ENSNGAP00000017645329 (aa)--
ENSNGAT00000023280-2695XM_008849665ENSNGAP00000017647374 (aa)XP_008847887UPI0004ED427B
ENSNGAT00000023272-1149XM_017802338ENSNGAP00000017639360 (aa)XP_017657827UPI00081A147D
Gene Model
Click here to download ENSNGAG00000018006's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000018006's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNGAG00000018006Rbfox39653.218ENSNGAG00000020528Rbfox29154.569
ENSNGAG00000018006Rbfox310062.468ENSNGAG00000023276Rbfox19458.454
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNGAG00000018006Rbfox310096.960ENSG00000167281RBFOX310097.460Homo_sapiens
ENSNGAG00000018006Rbfox310072.606ENSAPOG00000021630rbfox3b8269.061Acanthochromis_polyacanthus
ENSNGAG00000018006Rbfox38089.583ENSAPOG00000015658-8959.497Acanthochromis_polyacanthus
ENSNGAG00000018006Rbfox39877.236ENSAMEG00000014170RBFOX39372.019Ailuropoda_melanoleuca
ENSNGAG00000018006Rbfox39661.538ENSACIG00000003768-7273.282Amphilophus_citrinellus
ENSNGAG00000018006Rbfox38381.818ENSACIG00000010817rbfox3b8589.655Amphilophus_citrinellus
ENSNGAG00000018006Rbfox37989.583ENSAOCG00000010786-8066.193Amphiprion_ocellaris
ENSNGAG00000018006Rbfox310071.823ENSAOCG00000012358rbfox3b8168.103Amphiprion_ocellaris
ENSNGAG00000018006Rbfox38079.839ENSAPEG00000019081rbfox3b7389.655Amphiprion_percula
ENSNGAG00000018006Rbfox37989.583ENSAPEG00000015891-7961.622Amphiprion_percula
ENSNGAG00000018006Rbfox39667.335ENSATEG00000023101-9366.193Anabas_testudineus
ENSNGAG00000018006Rbfox310072.376ENSATEG00000019945rbfox3b9669.231Anabas_testudineus
ENSNGAG00000018006Rbfox310077.901ENSACAG00000016093RBFOX38376.081Anolis_carolinensis
ENSNGAG00000018006Rbfox310096.049ENSANAG00000023457RBFOX39196.049Aotus_nancymaae
ENSNGAG00000018006Rbfox310072.074ENSACLG00000020011rbfox3b9567.816Astatotilapia_calliptera
ENSNGAG00000018006Rbfox310071.074ENSACLG00000025552-8170.690Astatotilapia_calliptera
ENSNGAG00000018006Rbfox310066.942ENSAMXG00000042841rbfox3b8563.506Astyanax_mexicanus
ENSNGAG00000018006Rbfox39672.571ENSAMXG00000037246rbfox3a9071.714Astyanax_mexicanus
ENSNGAG00000018006Rbfox39792.500ENSBTAG00000006280RBFOX39792.500Bos_taurus
ENSNGAG00000018006Rbfox310096.111ENSCJAG00000009563RBFOX310096.111Callithrix_jacchus
ENSNGAG00000018006Rbfox37981.469ENSCAFG00000005547RBFOX310073.089Canis_familiaris
ENSNGAG00000018006Rbfox310097.059ENSCAFG00020008126RBFOX310097.059Canis_lupus_dingo
ENSNGAG00000018006Rbfox39893.151ENSCHIG00000009124RBFOX39893.151Capra_hircus
ENSNGAG00000018006Rbfox310097.872ENSTSYG00000029617RBFOX310097.872Carlito_syrichta
ENSNGAG00000018006Rbfox310096.277ENSCPOG00000021703RBFOX310096.277Cavia_porcellus
ENSNGAG00000018006Rbfox310096.049ENSCCAG00000028450RBFOX310096.049Cebus_capucinus
ENSNGAG00000018006Rbfox39790.938ENSCATG00000018349RBFOX310084.722Cercocebus_atys
ENSNGAG00000018006Rbfox310097.326ENSCLAG00000006449RBFOX310097.326Chinchilla_lanigera
ENSNGAG00000018006Rbfox310085.000ENSCSAG00000002355RBFOX310085.000Chlorocebus_sabaeus
ENSNGAG00000018006Rbfox39677.716ENSCPBG00000010904RBFOX39576.232Chrysemys_picta_bellii
ENSNGAG00000018006Rbfox310097.594ENSCANG00000043120RBFOX310097.594Colobus_angolensis_palliatus
ENSNGAG00000018006Rbfox310097.600ENSCGRG00001019476Rbfox310097.600Cricetulus_griseus_chok1gshd
ENSNGAG00000018006Rbfox310097.600ENSCGRG00000003268Rbfox310097.600Cricetulus_griseus_crigri
ENSNGAG00000018006Rbfox38489.583ENSCSEG00000015567RBFOX38964.644Cynoglossus_semilaevis
ENSNGAG00000018006Rbfox310057.808ENSCSEG00000020606RBFOX38756.322Cynoglossus_semilaevis
ENSNGAG00000018006Rbfox310071.823ENSCVAG00000006882rbfox3b8168.103Cyprinodon_variegatus
ENSNGAG00000018006Rbfox39671.714ENSDARG00000010083rbfox3a9470.225Danio_rerio
ENSNGAG00000018006Rbfox310063.939ENSDARG00000074310rbfox3b8579.310Danio_rerio
ENSNGAG00000018006Rbfox38583.007ENSDNOG00000039391RBFOX39475.141Dasypus_novemcinctus
ENSNGAG00000018006Rbfox39685.794ENSDORG00000005352Rbfox39683.565Dipodomys_ordii
ENSNGAG00000018006Rbfox310062.468ENSEBUG00000002129RBFOX39262.299Eptatretus_burgeri
ENSNGAG00000018006Rbfox38752.484ENSEBUG00000013559RBFOX37152.145Eptatretus_burgeri
ENSNGAG00000018006Rbfox310084.488ENSEASG00005005059RBFOX310084.488Equus_asinus_asinus
ENSNGAG00000018006Rbfox39681.503ENSECAG00000023811RBFOX39583.526Equus_caballus
ENSNGAG00000018006Rbfox39881.918ENSEEUG00000013974RBFOX39881.918Erinaceus_europaeus
ENSNGAG00000018006Rbfox310071.618ENSELUG00000017963rbfox3b9564.038Esox_lucius
ENSNGAG00000018006Rbfox39792.812ENSFCAG00000002555RBFOX39790.625Felis_catus
ENSNGAG00000018006Rbfox39668.539ENSFALG00000012288RBFOX39260.048Ficedula_albicollis
ENSNGAG00000018006Rbfox310091.755ENSFDAG00000007489RBFOX310091.755Fukomys_damarensis
ENSNGAG00000018006Rbfox310069.486ENSFHEG00000008550rbfox3b9565.300Fundulus_heteroclitus
ENSNGAG00000018006Rbfox310063.492ENSGMOG00000019304-9966.163Gadus_morhua
ENSNGAG00000018006Rbfox39677.971ENSGALG00000032889RBFOX38377.971Gallus_gallus
ENSNGAG00000018006Rbfox39869.774ENSGAFG00000005025rbfox3b7489.655Gambusia_affinis
ENSNGAG00000018006Rbfox39673.901ENSGACG00000002138-9673.901Gasterosteus_aculeatus
ENSNGAG00000018006Rbfox39677.716ENSGAGG00000020025RBFOX39576.232Gopherus_agassizii
ENSNGAG00000018006Rbfox310097.326ENSGGOG00000012546RBFOX310097.326Gorilla_gorilla
ENSNGAG00000018006Rbfox310072.074ENSHBUG00000018099rbfox3b8268.785Haplochromis_burtoni
ENSNGAG00000018006Rbfox310071.353ENSHBUG00000023098-9070.994Haplochromis_burtoni
ENSNGAG00000018006Rbfox310095.503ENSHGLG00000008679RBFOX310095.503Heterocephalus_glaber_female
ENSNGAG00000018006Rbfox39891.328ENSHGLG00100014739RBFOX39889.702Heterocephalus_glaber_male
ENSNGAG00000018006Rbfox37888.636ENSHCOG00000001863RBFOX38086.207Hippocampus_comes
ENSNGAG00000018006Rbfox39665.706ENSHCOG00000007444RBFOX37864.286Hippocampus_comes
ENSNGAG00000018006Rbfox310063.611ENSIPUG00000021966rbfox3b8474.336Ictalurus_punctatus
ENSNGAG00000018006Rbfox39671.978ENSIPUG00000012010rbfox3a9070.286Ictalurus_punctatus
ENSNGAG00000018006Rbfox39794.737ENSSTOG00000026817RBFOX39795.628Ictidomys_tridecemlineatus
ENSNGAG00000018006Rbfox310097.594ENSJJAG00000014167Rbfox310097.594Jaculus_jaculus
ENSNGAG00000018006Rbfox310071.823ENSKMAG00000006726rbfox3b7189.655Kryptolebias_marmoratus
ENSNGAG00000018006Rbfox39671.552ENSLBEG00000022508-8170.690Labrus_bergylta
ENSNGAG00000018006Rbfox310072.340ENSLBEG00000004030rbfox3b8589.655Labrus_bergylta
ENSNGAG00000018006Rbfox39668.548ENSLACG00000018409-9364.806Latimeria_chalumnae
ENSNGAG00000018006Rbfox39675.862ENSLOCG00000012267rbfox3a9075.000Lepisosteus_oculatus
ENSNGAG00000018006Rbfox39895.726ENSLAFG00000016623RBFOX39895.616Loxodonta_africana
ENSNGAG00000018006Rbfox310096.944ENSMFAG00000002247RBFOX310096.944Macaca_fascicularis
ENSNGAG00000018006Rbfox310096.960ENSMMUG00000023028RBFOX310096.960Macaca_mulatta
ENSNGAG00000018006Rbfox310092.246ENSMNEG00000041147RBFOX310092.246Macaca_nemestrina
ENSNGAG00000018006Rbfox39790.938ENSMLEG00000025686RBFOX310084.722Mandrillus_leucophaeus
ENSNGAG00000018006Rbfox38381.250ENSMAMG00000019810rbfox3b8489.655Mastacembelus_armatus
ENSNGAG00000018006Rbfox39666.092ENSMAMG00000020600-9264.151Mastacembelus_armatus
ENSNGAG00000018006Rbfox36665.556ENSMZEG00005003055-5988.889Maylandia_zebra
ENSNGAG00000018006Rbfox310072.074ENSMZEG00005000781rbfox3b8268.785Maylandia_zebra
ENSNGAG00000018006Rbfox35390.625ENSMGAG00000005600RBFOX37390.625Meleagris_gallopavo
ENSNGAG00000018006Rbfox310096.800ENSMAUG00000013543Rbfox310096.800Mesocricetus_auratus
ENSNGAG00000018006Rbfox310096.257ENSMICG00000014898RBFOX310096.257Microcebus_murinus
ENSNGAG00000018006Rbfox310097.594ENSMOCG00000015373Rbfox310097.594Microtus_ochrogaster
ENSNGAG00000018006Rbfox310069.755ENSMMOG00000020193rbfox3b9162.113Mola_mola
ENSNGAG00000018006Rbfox39677.971ENSMODG00000002089RBFOX38377.971Monodelphis_domestica
ENSNGAG00000018006Rbfox310070.994ENSMALG00000020407rbfox3b8167.241Monopterus_albus
ENSNGAG00000018006Rbfox38491.667ENSMALG00000018270-8593.103Monopterus_albus
ENSNGAG00000018006Rbfox310098.128MGP_CAROLIEiJ_G0017487Rbfox310098.817Mus_caroli
ENSNGAG00000018006Rbfox310097.861ENSMUSG00000025576Rbfox310098.621Mus_musculus
ENSNGAG00000018006Rbfox310098.400MGP_PahariEiJ_G0018614Rbfox310099.310Mus_pahari
ENSNGAG00000018006Rbfox310098.396MGP_SPRETEiJ_G0018331Rbfox310098.817Mus_spretus
ENSNGAG00000018006Rbfox39874.627ENSMPUG00000012319RBFOX39274.627Mustela_putorius_furo
ENSNGAG00000018006Rbfox310070.166ENSNBRG00000010102rbfox3b7488.889Neolamprologus_brichardi
ENSNGAG00000018006Rbfox37890.000ENSNBRG00000022885-7789.655Neolamprologus_brichardi
ENSNGAG00000018006Rbfox36196.296ENSNLEG00000000153-8296.296Nomascus_leucogenys
ENSNGAG00000018006Rbfox39664.928ENSMEUG00000004218-9662.899Notamacropus_eugenii
ENSNGAG00000018006Rbfox36896.629ENSOPRG00000016279-7596.629Ochotona_princeps
ENSNGAG00000018006Rbfox310097.326ENSODEG00000009433RBFOX310097.326Octodon_degus
ENSNGAG00000018006Rbfox310071.625ENSONIG00000007282-8771.264Oreochromis_niloticus
ENSNGAG00000018006Rbfox310077.573ENSONIG00000009549rbfox3b9675.000Oreochromis_niloticus
ENSNGAG00000018006Rbfox37979.371ENSOCUG00000014217RBFOX37878.322Oryctolagus_cuniculus
ENSNGAG00000018006Rbfox310072.414ENSORLG00000000905rbfox3b6766.138Oryzias_latipes
ENSNGAG00000018006Rbfox310072.414ENSORLG00020018030rbfox3b8964.984Oryzias_latipes_hni
ENSNGAG00000018006Rbfox310071.350ENSORLG00015009200rbfox3b8589.655Oryzias_latipes_hsok
ENSNGAG00000018006Rbfox36676.357ENSOMEG00000014677rbfox3b7677.465Oryzias_melastigma
ENSNGAG00000018006Rbfox39681.449ENSOGAG00000029595RBFOX39076.562Otolemur_garnettii
ENSNGAG00000018006Rbfox36982.456ENSOARG00000002908RBFOX39254.774Ovis_aries
ENSNGAG00000018006Rbfox39397.006ENSPPAG00000025383RBFOX39497.030Pan_paniscus
ENSNGAG00000018006Rbfox39792.500ENSPPRG00000007819RBFOX39790.312Panthera_pardus
ENSNGAG00000018006Rbfox310097.326ENSPTRG00000009727RBFOX310097.326Pan_troglodytes
ENSNGAG00000018006Rbfox39790.938ENSPANG00000019837RBFOX310084.722Papio_anubis
ENSNGAG00000018006Rbfox310059.524ENSPKIG00000022633-8555.647Paramormyrops_kingsleyae
ENSNGAG00000018006Rbfox39674.862ENSPKIG00000010299rbfox3a8567.018Paramormyrops_kingsleyae
ENSNGAG00000018006Rbfox38768.889ENSPMGG00000008000rbfox3b7767.667Periophthalmus_magnuspinnatus
ENSNGAG00000018006Rbfox310097.861ENSPEMG00000010500Rbfox310097.861Peromyscus_maniculatus_bairdii
ENSNGAG00000018006Rbfox36361.753ENSPMAG00000008689rbfox3b9962.151Petromyzon_marinus
ENSNGAG00000018006Rbfox39692.754ENSPCIG00000005766RBFOX39690.725Phascolarctos_cinereus
ENSNGAG00000018006Rbfox310072.606ENSPFOG00000018294rbfox3b9268.750Poecilia_formosa
ENSNGAG00000018006Rbfox36585.792ENSPLAG00000000481rbfox3b7190.698Poecilia_latipinna
ENSNGAG00000018006Rbfox310069.486ENSPMEG00000022997rbfox3b9565.300Poecilia_mexicana
ENSNGAG00000018006Rbfox310072.176ENSPREG00000012886rbfox3b8668.391Poecilia_reticulata
ENSNGAG00000018006Rbfox39871.233ENSPPYG00000008704RBFOX39372.329Pongo_abelii
ENSNGAG00000018006Rbfox39693.043ENSPCAG00000001401RBFOX39693.043Procavia_capensis
ENSNGAG00000018006Rbfox310096.667ENSPCOG00000012689RBFOX310096.389Propithecus_coquereli
ENSNGAG00000018006Rbfox39685.549ENSPVAG00000015243RBFOX39685.549Pteropus_vampyrus
ENSNGAG00000018006Rbfox37890.000ENSPNYG00000009079-7389.655Pundamilia_nyererei
ENSNGAG00000018006Rbfox37488.889ENSPNYG00000010414rbfox3b7488.889Pundamilia_nyererei
ENSNGAG00000018006Rbfox39673.077ENSPNAG00000002889rbfox3a9364.688Pygocentrus_nattereri
ENSNGAG00000018006Rbfox38383.333ENSPNAG00000018173rbfox3b7686.207Pygocentrus_nattereri
ENSNGAG00000018006Rbfox310098.400ENSRNOG00000003386Rbfox310098.400Rattus_norvegicus
ENSNGAG00000018006Rbfox39791.250ENSRBIG00000040449RBFOX38590.625Rhinopithecus_bieti
ENSNGAG00000018006Rbfox39791.250ENSRROG00000000766RBFOX310085.000Rhinopithecus_roxellana
ENSNGAG00000018006Rbfox310096.524ENSSBOG00000031591RBFOX310096.524Saimiri_boliviensis_boliviensis
ENSNGAG00000018006Rbfox39578.025ENSSHAG00000016076RBFOX39575.796Sarcophilus_harrisii
ENSNGAG00000018006Rbfox39675.414ENSSFOG00015023260rbfox3a8971.609Scleropages_formosus
ENSNGAG00000018006Rbfox39659.483ENSSFOG00015004716RBFOX38955.380Scleropages_formosus
ENSNGAG00000018006Rbfox310069.505ENSSMAG00000019052-9567.908Scophthalmus_maximus
ENSNGAG00000018006Rbfox310069.211ENSSMAG00000012618rbfox3b7165.385Scophthalmus_maximus
ENSNGAG00000018006Rbfox310069.486ENSSDUG00000023183rbfox3b9565.300Seriola_dumerili
ENSNGAG00000018006Rbfox39665.230ENSSDUG00000015801-8080.702Seriola_dumerili
ENSNGAG00000018006Rbfox310071.823ENSSLDG00000000149rbfox3b8168.103Seriola_lalandi_dorsalis
ENSNGAG00000018006Rbfox37989.583ENSSLDG00000016098-9066.577Seriola_lalandi_dorsalis
ENSNGAG00000018006Rbfox39677.522ENSSPUG00000011733RBFOX39576.657Sphenodon_punctatus
ENSNGAG00000018006Rbfox38863.863ENSSPAG00000004898-7561.589Stegastes_partitus
ENSNGAG00000018006Rbfox38381.250ENSSPAG00000017571rbfox3b7189.655Stegastes_partitus
ENSNGAG00000018006Rbfox38895.758ENSSSCG00000039498RBFOX310095.758Sus_scrofa
ENSNGAG00000018006Rbfox310068.435ENSTRUG00000004894rbfox3b9066.396Takifugu_rubripes
ENSNGAG00000018006Rbfox310065.063ENSTNIG00000011278rbfox3b9259.286Tetraodon_nigroviridis
ENSNGAG00000018006Rbfox39662.674ENSTBEG00000004296-9660.724Tupaia_belangeri
ENSNGAG00000018006Rbfox39687.536ENSTTRG00000003676RBFOX39687.536Tursiops_truncatus
ENSNGAG00000018006Rbfox39881.197ENSUAMG00000004668RBFOX39780.342Ursus_americanus
ENSNGAG00000018006Rbfox310096.944ENSVVUG00000017864RBFOX38996.944Vulpes_vulpes
ENSNGAG00000018006Rbfox310063.435ENSXETG00000020236rbfox39157.908Xenopus_tropicalis
ENSNGAG00000018006Rbfox310070.523ENSXCOG00000018262rbfox3b8588.000Xiphophorus_couchianus
ENSNGAG00000018006Rbfox310072.606ENSXMAG00000012939rbfox3b9558.466Xiphophorus_maculatus

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