EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000018138 (Gene tree)
Gene ID: 103740603
Gene Symbol: Xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 82422 bases
Position: chrKL198962.1:603188-685609
Accession: 103740603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000017841	XRN_N	PF03159.18	7.4e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000023476	-	3372	XM_008841269	ENSNGAP00000017841	950 (aa)	XP_008839491	UPI0004ED6728

Gene Model

Click here to download ENSNGAG00000018138's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000018138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000018138	Xrn2	71	37.850	ENSNGAG00000023964	Xrn1	60	37.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000018138	Xrn2	100	97.474	ENSG00000088930	XRN2	100	97.474	Homo_sapiens
ENSNGAG00000018138	Xrn2	97	72.222	ENSAPOG00000009818	xrn2	100	70.948	Acanthochromis_polyacanthus
ENSNGAG00000018138	Xrn2	100	96.842	ENSAMEG00000012581	XRN2	100	96.842	Ailuropoda_melanoleuca
ENSNGAG00000018138	Xrn2	90	71.217	ENSACIG00000015047	xrn2	95	75.240	Amphilophus_citrinellus
ENSNGAG00000018138	Xrn2	97	72.543	ENSAOCG00000023632	xrn2	100	71.356	Amphiprion_ocellaris
ENSNGAG00000018138	Xrn2	97	72.465	ENSAPEG00000014871	xrn2	100	71.181	Amphiprion_percula
ENSNGAG00000018138	Xrn2	95	72.264	ENSATEG00000001273	xrn2	97	71.580	Anabas_testudineus
ENSNGAG00000018138	Xrn2	97	83.531	ENSAPLG00000013869	XRN2	99	83.961	Anas_platyrhynchos
ENSNGAG00000018138	Xrn2	100	80.952	ENSACAG00000005565	XRN2	100	80.952	Anolis_carolinensis
ENSNGAG00000018138	Xrn2	100	97.053	ENSANAG00000020126	XRN2	100	97.053	Aotus_nancymaae
ENSNGAG00000018138	Xrn2	90	74.596	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSNGAG00000018138	Xrn2	100	71.764	ENSAMXG00000018301	xrn2	100	71.764	Astyanax_mexicanus
ENSNGAG00000018138	Xrn2	100	94.637	ENSBTAG00000011304	XRN2	100	94.637	Bos_taurus
ENSNGAG00000018138	Xrn2	87	55.465	WBGene00006964	xrn-2	89	54.864	Caenorhabditis_elegans
ENSNGAG00000018138	Xrn2	100	97.368	ENSCJAG00000005611	XRN2	100	97.368	Callithrix_jacchus
ENSNGAG00000018138	Xrn2	100	96.842	ENSCAFG00000005185	XRN2	100	96.842	Canis_familiaris
ENSNGAG00000018138	Xrn2	100	96.842	ENSCAFG00020027479	XRN2	100	96.842	Canis_lupus_dingo
ENSNGAG00000018138	Xrn2	100	94.742	ENSCHIG00000006921	XRN2	100	94.742	Capra_hircus
ENSNGAG00000018138	Xrn2	100	96.105	ENSTSYG00000008315	XRN2	100	96.105	Carlito_syrichta
ENSNGAG00000018138	Xrn2	97	81.985	ENSCAPG00000010773	XRN2	99	81.877	Cavia_aperea
ENSNGAG00000018138	Xrn2	100	96.947	ENSCPOG00000009407	XRN2	100	96.947	Cavia_porcellus
ENSNGAG00000018138	Xrn2	100	97.684	ENSCATG00000040350	XRN2	100	97.684	Cercocebus_atys
ENSNGAG00000018138	Xrn2	100	97.263	ENSCLAG00000013419	XRN2	100	97.263	Chinchilla_lanigera
ENSNGAG00000018138	Xrn2	100	97.684	ENSCSAG00000011094	XRN2	100	97.684	Chlorocebus_sabaeus
ENSNGAG00000018138	Xrn2	68	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSNGAG00000018138	Xrn2	100	84.792	ENSCPBG00000023533	XRN2	100	85.417	Chrysemys_picta_bellii
ENSNGAG00000018138	Xrn2	86	59.379	ENSCING00000022336	-	100	59.618	Ciona_intestinalis
ENSNGAG00000018138	Xrn2	87	58.353	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSNGAG00000018138	Xrn2	100	97.684	ENSCANG00000040240	XRN2	100	97.684	Colobus_angolensis_palliatus
ENSNGAG00000018138	Xrn2	98	97.847	ENSCGRG00001010676	Xrn2	99	97.847	Cricetulus_griseus_chok1gshd
ENSNGAG00000018138	Xrn2	97	96.872	ENSCGRG00000006378	Xrn2	99	96.872	Cricetulus_griseus_crigri
ENSNGAG00000018138	Xrn2	54	72.549	ENSCSEG00000005628	xrn2	100	72.549	Cynoglossus_semilaevis
ENSNGAG00000018138	Xrn2	89	71.839	ENSCVAG00000018999	xrn2	98	77.333	Cyprinodon_variegatus
ENSNGAG00000018138	Xrn2	100	70.431	ENSDARG00000101900	xrn2	96	78.585	Danio_rerio
ENSNGAG00000018138	Xrn2	100	96.526	ENSDNOG00000001895	XRN2	100	96.526	Dasypus_novemcinctus
ENSNGAG00000018138	Xrn2	100	95.368	ENSDORG00000005434	Xrn2	100	95.368	Dipodomys_ordii
ENSNGAG00000018138	Xrn2	87	56.250	FBgn0031868	Rat1	87	56.832	Drosophila_melanogaster
ENSNGAG00000018138	Xrn2	100	83.263	ENSETEG00000001740	XRN2	100	83.263	Echinops_telfairi
ENSNGAG00000018138	Xrn2	84	71.879	ENSEBUG00000016136	xrn2	100	71.879	Eptatretus_burgeri
ENSNGAG00000018138	Xrn2	100	96.421	ENSEASG00005002484	XRN2	100	96.421	Equus_asinus_asinus
ENSNGAG00000018138	Xrn2	99	96.621	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSNGAG00000018138	Xrn2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSNGAG00000018138	Xrn2	100	70.060	ENSELUG00000000552	xrn2	100	71.443	Esox_lucius
ENSNGAG00000018138	Xrn2	100	96.632	ENSFCAG00000007970	XRN2	100	96.632	Felis_catus
ENSNGAG00000018138	Xrn2	100	82.809	ENSFALG00000004508	XRN2	100	83.229	Ficedula_albicollis
ENSNGAG00000018138	Xrn2	100	96.737	ENSFDAG00000016311	XRN2	100	96.737	Fukomys_damarensis
ENSNGAG00000018138	Xrn2	54	70.038	ENSFHEG00000013039	xrn2	98	70.038	Fundulus_heteroclitus
ENSNGAG00000018138	Xrn2	86	73.512	ENSGMOG00000013436	xrn2	100	73.512	Gadus_morhua
ENSNGAG00000018138	Xrn2	100	82.827	ENSGALG00000008372	XRN2	100	82.827	Gallus_gallus
ENSNGAG00000018138	Xrn2	89	74.419	ENSGAFG00000014284	xrn2	98	74.419	Gambusia_affinis
ENSNGAG00000018138	Xrn2	87	75.240	ENSGACG00000011870	xrn2	100	75.240	Gasterosteus_aculeatus
ENSNGAG00000018138	Xrn2	100	84.583	ENSGAGG00000004884	XRN2	100	85.208	Gopherus_agassizii
ENSNGAG00000018138	Xrn2	100	97.579	ENSGGOG00000013738	XRN2	100	97.579	Gorilla_gorilla
ENSNGAG00000018138	Xrn2	54	74.856	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSNGAG00000018138	Xrn2	100	95.684	ENSHGLG00000014831	XRN2	100	95.684	Heterocephalus_glaber_female
ENSNGAG00000018138	Xrn2	100	95.684	ENSHGLG00100013130	XRN2	100	95.684	Heterocephalus_glaber_male
ENSNGAG00000018138	Xrn2	99	68.889	ENSHCOG00000011994	xrn2	99	69.888	Hippocampus_comes
ENSNGAG00000018138	Xrn2	100	69.627	ENSIPUG00000006639	xrn2	100	69.627	Ictalurus_punctatus
ENSNGAG00000018138	Xrn2	100	97.263	ENSSTOG00000000589	XRN2	100	97.263	Ictidomys_tridecemlineatus
ENSNGAG00000018138	Xrn2	100	97.158	ENSJJAG00000022128	Xrn2	100	97.158	Jaculus_jaculus
ENSNGAG00000018138	Xrn2	54	80.078	ENSLBEG00000010041	xrn2	100	80.078	Labrus_bergylta
ENSNGAG00000018138	Xrn2	94	76.863	ENSLACG00000008307	XRN2	99	79.264	Latimeria_chalumnae
ENSNGAG00000018138	Xrn2	99	73.013	ENSLOCG00000016874	xrn2	100	73.013	Lepisosteus_oculatus
ENSNGAG00000018138	Xrn2	100	95.579	ENSLAFG00000014624	XRN2	100	95.579	Loxodonta_africana
ENSNGAG00000018138	Xrn2	100	97.684	ENSMFAG00000038122	XRN2	100	97.684	Macaca_fascicularis
ENSNGAG00000018138	Xrn2	100	97.684	ENSMMUG00000011405	XRN2	100	97.684	Macaca_mulatta
ENSNGAG00000018138	Xrn2	100	97.579	ENSMNEG00000040626	XRN2	100	97.579	Macaca_nemestrina
ENSNGAG00000018138	Xrn2	100	97.579	ENSMLEG00000041897	XRN2	100	97.579	Mandrillus_leucophaeus
ENSNGAG00000018138	Xrn2	95	73.123	ENSMAMG00000008633	xrn2	98	71.654	Mastacembelus_armatus
ENSNGAG00000018138	Xrn2	90	76.559	ENSMZEG00005022362	xrn2	97	76.559	Maylandia_zebra
ENSNGAG00000018138	Xrn2	99	81.354	ENSMGAG00000003196	XRN2	99	81.354	Meleagris_gallopavo
ENSNGAG00000018138	Xrn2	100	97.789	ENSMAUG00000021842	Xrn2	100	97.789	Mesocricetus_auratus
ENSNGAG00000018138	Xrn2	100	96.316	ENSMICG00000008126	XRN2	100	96.316	Microcebus_murinus
ENSNGAG00000018138	Xrn2	100	96.737	ENSMOCG00000012588	Xrn2	100	96.737	Microtus_ochrogaster
ENSNGAG00000018138	Xrn2	89	74.227	ENSMMOG00000017576	xrn2	96	74.621	Mola_mola
ENSNGAG00000018138	Xrn2	100	90.947	ENSMODG00000006163	XRN2	100	90.947	Monodelphis_domestica
ENSNGAG00000018138	Xrn2	91	72.697	ENSMALG00000011355	xrn2	100	74.819	Monopterus_albus
ENSNGAG00000018138	Xrn2	100	96.635	MGP_CAROLIEiJ_G0024400	Xrn2	100	96.635	Mus_caroli
ENSNGAG00000018138	Xrn2	100	96.845	ENSMUSG00000027433	Xrn2	100	96.845	Mus_musculus
ENSNGAG00000018138	Xrn2	100	96.635	MGP_PahariEiJ_G0025843	Xrn2	100	96.635	Mus_pahari
ENSNGAG00000018138	Xrn2	100	96.845	MGP_SPRETEiJ_G0025318	Xrn2	100	96.845	Mus_spretus
ENSNGAG00000018138	Xrn2	100	95.036	ENSMPUG00000001198	XRN2	93	95.036	Mustela_putorius_furo
ENSNGAG00000018138	Xrn2	100	96.737	ENSMLUG00000001536	XRN2	100	96.737	Myotis_lucifugus
ENSNGAG00000018138	Xrn2	90	76.763	ENSNBRG00000008062	xrn2	97	76.763	Neolamprologus_brichardi
ENSNGAG00000018138	Xrn2	100	97.579	ENSNLEG00000009991	XRN2	100	97.579	Nomascus_leucogenys
ENSNGAG00000018138	Xrn2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSNGAG00000018138	Xrn2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSNGAG00000018138	Xrn2	100	96.526	ENSODEG00000010745	-	100	96.526	Octodon_degus
ENSNGAG00000018138	Xrn2	98	87.594	ENSODEG00000000860	-	99	88.026	Octodon_degus
ENSNGAG00000018138	Xrn2	100	71.959	ENSONIG00000018720	xrn2	100	72.091	Oreochromis_niloticus
ENSNGAG00000018138	Xrn2	100	91.282	ENSOANG00000015673	XRN2	100	91.282	Ornithorhynchus_anatinus
ENSNGAG00000018138	Xrn2	100	97.368	ENSOCUG00000013468	XRN2	100	97.368	Oryctolagus_cuniculus
ENSNGAG00000018138	Xrn2	98	71.132	ENSORLG00000017213	xrn2	97	75.751	Oryzias_latipes
ENSNGAG00000018138	Xrn2	98	71.132	ENSORLG00020001824	xrn2	100	70.816	Oryzias_latipes_hni
ENSNGAG00000018138	Xrn2	98	70.924	ENSORLG00015019747	xrn2	100	70.612	Oryzias_latipes_hsok
ENSNGAG00000018138	Xrn2	97	70.285	ENSOMEG00000019820	xrn2	100	69.614	Oryzias_melastigma
ENSNGAG00000018138	Xrn2	100	96.215	ENSOGAG00000001068	XRN2	100	96.215	Otolemur_garnettii
ENSNGAG00000018138	Xrn2	97	94.600	ENSOARG00000004443	XRN2	100	94.600	Ovis_aries
ENSNGAG00000018138	Xrn2	100	97.579	ENSPPAG00000033549	XRN2	100	97.579	Pan_paniscus
ENSNGAG00000018138	Xrn2	100	96.632	ENSPPRG00000008732	XRN2	100	96.632	Panthera_pardus
ENSNGAG00000018138	Xrn2	97	96.541	ENSPTIG00000015683	XRN2	97	96.541	Panthera_tigris_altaica
ENSNGAG00000018138	Xrn2	100	97.579	ENSPTRG00000013308	XRN2	100	97.579	Pan_troglodytes
ENSNGAG00000018138	Xrn2	100	97.684	ENSPANG00000018088	XRN2	100	97.684	Papio_anubis
ENSNGAG00000018138	Xrn2	100	71.341	ENSPKIG00000016889	xrn2	100	71.341	Paramormyrops_kingsleyae
ENSNGAG00000018138	Xrn2	81	87.240	ENSPSIG00000014666	XRN2	100	87.240	Pelodiscus_sinensis
ENSNGAG00000018138	Xrn2	100	97.158	ENSPEMG00000000111	Xrn2	100	97.158	Peromyscus_maniculatus_bairdii
ENSNGAG00000018138	Xrn2	100	70.093	ENSPFOG00000004182	xrn2	99	70.600	Poecilia_formosa
ENSNGAG00000018138	Xrn2	89	74.884	ENSPLAG00000007351	xrn2	96	74.884	Poecilia_latipinna
ENSNGAG00000018138	Xrn2	94	68.743	ENSPMEG00000011798	xrn2	99	69.423	Poecilia_mexicana
ENSNGAG00000018138	Xrn2	89	74.884	ENSPREG00000012452	xrn2	96	74.884	Poecilia_reticulata
ENSNGAG00000018138	Xrn2	100	97.158	ENSPPYG00000010755	XRN2	100	97.158	Pongo_abelii
ENSNGAG00000018138	Xrn2	100	90.126	ENSPCAG00000011191	XRN2	100	90.126	Procavia_capensis
ENSNGAG00000018138	Xrn2	100	89.368	ENSPCOG00000016468	XRN2	100	89.368	Propithecus_coquereli
ENSNGAG00000018138	Xrn2	93	94.529	ENSPVAG00000004596	XRN2	93	94.529	Pteropus_vampyrus
ENSNGAG00000018138	Xrn2	90	74.596	ENSPNYG00000001765	xrn2	97	74.596	Pundamilia_nyererei
ENSNGAG00000018138	Xrn2	100	71.735	ENSPNAG00000010956	xrn2	99	71.735	Pygocentrus_nattereri
ENSNGAG00000018138	Xrn2	100	97.161	ENSRNOG00000011785	Xrn2	100	97.161	Rattus_norvegicus
ENSNGAG00000018138	Xrn2	86	98.044	ENSRBIG00000036193	XRN2	100	98.044	Rhinopithecus_bieti
ENSNGAG00000018138	Xrn2	100	97.684	ENSRROG00000044400	XRN2	90	97.684	Rhinopithecus_roxellana
ENSNGAG00000018138	Xrn2	64	56.111	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSNGAG00000018138	Xrn2	100	97.368	ENSSBOG00000021014	XRN2	100	97.368	Saimiri_boliviensis_boliviensis
ENSNGAG00000018138	Xrn2	100	72.239	ENSSFOG00015001091	xrn2	100	72.239	Scleropages_formosus
ENSNGAG00000018138	Xrn2	89	74.912	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSNGAG00000018138	Xrn2	91	72.511	ENSSDUG00000012802	xrn2	99	72.851	Seriola_dumerili
ENSNGAG00000018138	Xrn2	93	74.266	ENSSLDG00000021273	xrn2	100	74.266	Seriola_lalandi_dorsalis
ENSNGAG00000018138	Xrn2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSNGAG00000018138	Xrn2	98	79.274	ENSSPUG00000005485	XRN2	96	79.380	Sphenodon_punctatus
ENSNGAG00000018138	Xrn2	100	71.034	ENSSPAG00000016027	xrn2	99	71.034	Stegastes_partitus
ENSNGAG00000018138	Xrn2	100	94.737	ENSSSCG00000007109	XRN2	100	94.737	Sus_scrofa
ENSNGAG00000018138	Xrn2	100	81.628	ENSTGUG00000007535	XRN2	100	82.046	Taeniopygia_guttata
ENSNGAG00000018138	Xrn2	100	68.081	ENSTRUG00000015489	xrn2	100	68.453	Takifugu_rubripes
ENSNGAG00000018138	Xrn2	100	71.755	ENSTNIG00000010712	xrn2	100	71.755	Tetraodon_nigroviridis
ENSNGAG00000018138	Xrn2	100	96.211	ENSTBEG00000004119	XRN2	100	96.211	Tupaia_belangeri
ENSNGAG00000018138	Xrn2	93	96.757	ENSTTRG00000009087	XRN2	93	96.757	Tursiops_truncatus
ENSNGAG00000018138	Xrn2	100	96.947	ENSUAMG00000024634	XRN2	100	96.947	Ursus_americanus
ENSNGAG00000018138	Xrn2	97	96.649	ENSUMAG00000004012	XRN2	95	96.649	Ursus_maritimus
ENSNGAG00000018138	Xrn2	89	88.994	ENSVPAG00000010694	XRN2	91	88.994	Vicugna_pacos
ENSNGAG00000018138	Xrn2	100	96.737	ENSVVUG00000012178	XRN2	100	96.737	Vulpes_vulpes
ENSNGAG00000018138	Xrn2	100	74.479	ENSXETG00000023501	xrn2	100	75.104	Xenopus_tropicalis
ENSNGAG00000018138	Xrn2	100	68.834	ENSXMAG00000000242	xrn2	92	79.319	Xiphophorus_maculatus