EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNGAG00000018292 (Gene tree)
Gene ID
103736696
Gene Symbol
Pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Nannospalax_galili
Status
putative
Strand
Minus strand
Length
16546 bases
Position
chrKL201331.1:46977-63522
Accession
103736696
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNGAP00000018047PABPPF00658.181.4e-3111
ENSNGAP00000018052PABPPF00658.181.6e-3111
ENSNGAP00000018047RRM_5PF13893.65e-0911
ENSNGAP00000018052RRM_5PF13893.66.4e-0911
ENSNGAP00000018047RRM_1PF00076.226.8e-9214
ENSNGAP00000018047RRM_1PF00076.226.8e-9224
ENSNGAP00000018047RRM_1PF00076.226.8e-9234
ENSNGAP00000018047RRM_1PF00076.226.8e-9244
ENSNGAP00000018052RRM_1PF00076.228.7e-9214
ENSNGAP00000018052RRM_1PF00076.228.7e-9224
ENSNGAP00000018052RRM_1PF00076.228.7e-9234
ENSNGAP00000018052RRM_1PF00076.228.7e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNGAT00000023694-2766XM_008836201ENSNGAP00000018052644 (aa)XP_008834423UPI0004ED3746
ENSNGAT00000023689-2229XM_008836203ENSNGAP00000018047615 (aa)XP_008834425UPI0004ED527E
Gene Model
Click here to download ENSNGAG00000018292's gene model file
Pathways
Pathway IDPathway NameSource
ngi03013RNA transportKEGG
ngi03015mRNA surveillance pathwayKEGG
ngi03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000018292's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNGAG00000018292Pabpc45531.646ENSNGAG00000008883Hnrnpa05232.450
ENSNGAG00000018292Pabpc45930.189ENSNGAG00000011970Tia18530.189
ENSNGAG00000018292Pabpc46034.940ENSNGAG00000014535Elavl29934.940
ENSNGAG00000018292Pabpc49861.246ENSNGAG00000023773-9960.544
ENSNGAG00000018292Pabpc46065.728ENSNGAG00000004371Pabpc59965.728
ENSNGAG00000018292Pabpc49860.510ENSNGAG00000010458Pabpc1l9960.806
ENSNGAG00000018292Pabpc49967.943ENSNGAG00000023820-9867.783
ENSNGAG00000018292Pabpc45237.113ENSNGAG00000017427Celf67337.113
ENSNGAG00000018292Pabpc49978.583ENSNGAG00000000996Pabpc19978.425
ENSNGAG00000018292Pabpc46030.952ENSNGAG00000023123Elavl48730.921
ENSNGAG00000018292Pabpc46134.722ENSNGAG00000000968Elavl39233.735
ENSNGAG00000018292Pabpc49966.401ENSNGAG00000016040Pabpc29966.401
ENSNGAG00000018292Pabpc46079.235ENSNGAG00000012688-9875.510
ENSNGAG00000018292Pabpc45732.353ENSNGAG00000020427Tial16932.353
ENSNGAG00000018292Pabpc45933.553ENSNGAG00000019590Elavl19530.000
ENSNGAG00000018292Pabpc49967.829ENSNGAG00000000987Pabpc69967.512
ENSNGAG00000018292Pabpc46272.011ENSNGAG00000001502Pabpc4l9972.011
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNGAG00000018292Pabpc410099.224ENSG00000090621PABPC4100100.000Homo_sapiens
ENSNGAG00000018292Pabpc49984.790ENSAPOG00000001161pabpc410085.008Acanthochromis_polyacanthus
ENSNGAG00000018292Pabpc49857.119ENSAMEG00000015083-9956.792Ailuropoda_melanoleuca
ENSNGAG00000018292Pabpc410096.667ENSAMEG00000011535-10096.667Ailuropoda_melanoleuca
ENSNGAG00000018292Pabpc410084.494ENSACIG00000023343pabpc410085.127Amphilophus_citrinellus
ENSNGAG00000018292Pabpc49984.951ENSAOCG00000021529pabpc410085.167Amphiprion_ocellaris
ENSNGAG00000018292Pabpc49984.951ENSAPEG00000019196pabpc410085.167Amphiprion_percula
ENSNGAG00000018292Pabpc49984.653ENSATEG00000007402pabpc410084.873Anabas_testudineus
ENSNGAG00000018292Pabpc49989.365ENSAPLG00000009729-10089.365Anas_platyrhynchos
ENSNGAG00000018292Pabpc49987.657ENSACAG00000002544PABPC410087.657Anolis_carolinensis
ENSNGAG00000018292Pabpc410096.970ENSANAG00000025079PABPC410096.970Aotus_nancymaae
ENSNGAG00000018292Pabpc410084.554ENSACLG00000019558pabpc410085.191Astatotilapia_calliptera
ENSNGAG00000018292Pabpc49978.503ENSAMXG00000018779pabpc49978.956Astyanax_mexicanus
ENSNGAG00000018292Pabpc410099.070ENSBTAG00000017125PABPC410099.070Bos_taurus
ENSNGAG00000018292Pabpc45986.826ENSBTAG00000048536-9886.826Bos_taurus
ENSNGAG00000018292Pabpc410096.515ENSCJAG00000002512-10096.515Callithrix_jacchus
ENSNGAG00000018292Pabpc47888.716ENSCJAG00000045953-9288.797Callithrix_jacchus
ENSNGAG00000018292Pabpc410096.830ENSCAFG00000003081PABPC410096.830Canis_familiaris
ENSNGAG00000018292Pabpc410096.818ENSCAFG00020004161PABPC410096.818Canis_lupus_dingo
ENSNGAG00000018292Pabpc410096.818ENSCHIG00000019398-10096.818Capra_hircus
ENSNGAG00000018292Pabpc410078.416ENSCHIG00000023385-10078.416Capra_hircus
ENSNGAG00000018292Pabpc410096.515ENSTSYG00000006532PABPC410096.515Carlito_syrichta
ENSNGAG00000018292Pabpc49996.809ENSCAPG00000015984PABPC410096.809Cavia_aperea
ENSNGAG00000018292Pabpc410096.818ENSCPOG00000009552PABPC410096.818Cavia_porcellus
ENSNGAG00000018292Pabpc410096.818ENSCCAG00000037306PABPC410096.818Cebus_capucinus
ENSNGAG00000018292Pabpc410096.970ENSCATG00000042164PABPC410096.970Cercocebus_atys
ENSNGAG00000018292Pabpc410096.515ENSCLAG00000011899PABPC410096.515Chinchilla_lanigera
ENSNGAG00000018292Pabpc410096.970ENSCSAG00000001135PABPC410096.970Chlorocebus_sabaeus
ENSNGAG00000018292Pabpc48997.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSNGAG00000018292Pabpc49989.841ENSCPBG00000001038PABPC410089.841Chrysemys_picta_bellii
ENSNGAG00000018292Pabpc49996.774ENSCANG00000034177PABPC410096.774Colobus_angolensis_palliatus
ENSNGAG00000018292Pabpc410097.577ENSCGRG00001018166Pabpc410097.577Cricetulus_griseus_chok1gshd
ENSNGAG00000018292Pabpc49997.653ENSCGRG00000009777Pabpc410097.653Cricetulus_griseus_crigri
ENSNGAG00000018292Pabpc410083.758ENSCSEG00000000130pabpc410084.395Cynoglossus_semilaevis
ENSNGAG00000018292Pabpc49984.927ENSCVAG00000019246pabpc410085.575Cyprinodon_variegatus
ENSNGAG00000018292Pabpc49984.395ENSDARG00000059259pabpc410084.818Danio_rerio
ENSNGAG00000018292Pabpc49996.250ENSDNOG00000018444-10096.250Dasypus_novemcinctus
ENSNGAG00000018292Pabpc410099.224ENSDORG00000011581Pabpc410099.224Dipodomys_ordii
ENSNGAG00000018292Pabpc4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSNGAG00000018292Pabpc48662.206ENSETEG00000009172-9963.004Echinops_telfairi
ENSNGAG00000018292Pabpc49976.677ENSEBUG00000000992pabpc410076.198Eptatretus_burgeri
ENSNGAG00000018292Pabpc49776.423ENSEBUG00000013782pabpc49975.758Eptatretus_burgeri
ENSNGAG00000018292Pabpc410096.818ENSEASG00005014119PABPC410096.818Equus_asinus_asinus
ENSNGAG00000018292Pabpc410096.818ENSECAG00000009396PABPC410096.818Equus_caballus
ENSNGAG00000018292Pabpc410093.333ENSEEUG00000002962PABPC410093.333Erinaceus_europaeus
ENSNGAG00000018292Pabpc49982.907ENSELUG00000003195pabpc49983.360Esox_lucius
ENSNGAG00000018292Pabpc410096.970ENSFCAG00000015254-10096.970Felis_catus
ENSNGAG00000018292Pabpc49989.030ENSFALG00000000543PABPC410089.030Ficedula_albicollis
ENSNGAG00000018292Pabpc49066.383ENSFDAG00000010581-10062.349Fukomys_damarensis
ENSNGAG00000018292Pabpc410096.515ENSFDAG00000020016-10096.515Fukomys_damarensis
ENSNGAG00000018292Pabpc410084.689ENSFHEG00000007548pabpc410085.327Fundulus_heteroclitus
ENSNGAG00000018292Pabpc49982.567ENSGMOG00000019025pabpc49983.201Gadus_morhua
ENSNGAG00000018292Pabpc49990.000ENSGALG00000003800PABPC410090.000Gallus_gallus
ENSNGAG00000018292Pabpc410083.599ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSNGAG00000018292Pabpc410082.962ENSGACG00000007179pabpc410083.599Gasterosteus_aculeatus
ENSNGAG00000018292Pabpc49989.524ENSGAGG00000001888PABPC410089.524Gopherus_agassizii
ENSNGAG00000018292Pabpc410096.818ENSGGOG00000004002PABPC410096.818Gorilla_gorilla
ENSNGAG00000018292Pabpc410084.713ENSHBUG00000020206pabpc410085.350Haplochromis_burtoni
ENSNGAG00000018292Pabpc410099.068ENSHGLG00000011162PABPC410099.068Heterocephalus_glaber_female
ENSNGAG00000018292Pabpc410099.068ENSHGLG00100001580PABPC410099.068Heterocephalus_glaber_male
ENSNGAG00000018292Pabpc410083.413ENSHCOG00000012694pabpc410084.051Hippocampus_comes
ENSNGAG00000018292Pabpc49882.609ENSIPUG00000016620pabpc49982.650Ictalurus_punctatus
ENSNGAG00000018292Pabpc410098.913ENSSTOG00000010416PABPC410098.913Ictidomys_tridecemlineatus
ENSNGAG00000018292Pabpc410096.894ENSJJAG00000007781Pabpc410096.894Jaculus_jaculus
ENSNGAG00000018292Pabpc49984.430ENSKMAG00000013597pabpc49985.072Kryptolebias_marmoratus
ENSNGAG00000018292Pabpc410083.968ENSLBEG00000013654pabpc410084.286Labrus_bergylta
ENSNGAG00000018292Pabpc49986.909ENSLACG00000011907PABPC410086.909Latimeria_chalumnae
ENSNGAG00000018292Pabpc49985.150ENSLOCG00000001877pabpc49985.940Lepisosteus_oculatus
ENSNGAG00000018292Pabpc410099.350ENSLAFG00000000151PABPC410099.350Loxodonta_africana
ENSNGAG00000018292Pabpc410096.970ENSMFAG00000041481PABPC410096.970Macaca_fascicularis
ENSNGAG00000018292Pabpc410096.970ENSMMUG00000007497PABPC410096.970Macaca_mulatta
ENSNGAG00000018292Pabpc410096.818ENSMNEG00000043054PABPC410096.818Macaca_nemestrina
ENSNGAG00000018292Pabpc410096.970ENSMLEG00000040716PABPC410096.970Mandrillus_leucophaeus
ENSNGAG00000018292Pabpc49984.491ENSMAMG00000010025pabpc49984.776Mastacembelus_armatus
ENSNGAG00000018292Pabpc410084.395ENSMZEG00005006141pabpc410085.032Maylandia_zebra
ENSNGAG00000018292Pabpc49986.905ENSMGAG00000005408PABPC410086.905Meleagris_gallopavo
ENSNGAG00000018292Pabpc47489.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSNGAG00000018292Pabpc45981.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSNGAG00000018292Pabpc410094.495ENSMAUG00000019763-8494.495Mesocricetus_auratus
ENSNGAG00000018292Pabpc48898.718ENSMICG00000016633-10098.718Microcebus_murinus
ENSNGAG00000018292Pabpc49985.558ENSMICG00000036729-10085.558Microcebus_murinus
ENSNGAG00000018292Pabpc410095.783ENSMOCG00000006763Pabpc410095.783Microtus_ochrogaster
ENSNGAG00000018292Pabpc410082.742ENSMMOG00000002363pabpc49981.359Mola_mola
ENSNGAG00000018292Pabpc46074.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSNGAG00000018292Pabpc49887.752ENSMODG00000017657-10087.367Monodelphis_domestica
ENSNGAG00000018292Pabpc49984.219ENSMALG00000011017pabpc410084.444Monopterus_albus
ENSNGAG00000018292Pabpc49985.017MGP_CAROLIEiJ_G0024864-10085.017Mus_caroli
ENSNGAG00000018292Pabpc410095.303MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSNGAG00000018292Pabpc410098.137ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSNGAG00000018292Pabpc49995.392MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSNGAG00000018292Pabpc49976.523MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSNGAG00000018292Pabpc49551.987ENSMPUG00000006836-10051.759Mustela_putorius_furo
ENSNGAG00000018292Pabpc410096.970ENSMPUG00000014414-10096.970Mustela_putorius_furo
ENSNGAG00000018292Pabpc410098.862ENSMLUG00000012068PABPC410098.862Myotis_lucifugus
ENSNGAG00000018292Pabpc46192.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSNGAG00000018292Pabpc46986.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSNGAG00000018292Pabpc410099.379ENSNLEG00000011928PABPC410099.379Nomascus_leucogenys
ENSNGAG00000018292Pabpc48798.507ENSOPRG00000011984PABPC48698.507Ochotona_princeps
ENSNGAG00000018292Pabpc410095.909ENSODEG00000006592-10095.909Octodon_degus
ENSNGAG00000018292Pabpc49986.242ENSODEG00000017434-10086.354Octodon_degus
ENSNGAG00000018292Pabpc45485.714ENSODEG00000013457-10085.714Octodon_degus
ENSNGAG00000018292Pabpc410084.713ENSONIG00000008176pabpc410085.350Oreochromis_niloticus
ENSNGAG00000018292Pabpc49989.365ENSOANG00000010001PABPC410089.365Ornithorhynchus_anatinus
ENSNGAG00000018292Pabpc49696.203ENSOCUG00000000562PABPC48896.203Oryctolagus_cuniculus
ENSNGAG00000018292Pabpc49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSNGAG00000018292Pabpc49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSNGAG00000018292Pabpc49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSNGAG00000018292Pabpc49984.814ENSOMEG00000014410pabpc49985.256Oryzias_melastigma
ENSNGAG00000018292Pabpc410098.764ENSOGAG00000004067PABPC410098.764Otolemur_garnettii
ENSNGAG00000018292Pabpc410096.818ENSOARG00000020060PABPC410096.818Ovis_aries
ENSNGAG00000018292Pabpc410096.818ENSPPAG00000043625PABPC410096.818Pan_paniscus
ENSNGAG00000018292Pabpc410096.970ENSPPRG00000024727PABPC410096.970Panthera_pardus
ENSNGAG00000018292Pabpc410096.970ENSPTIG00000005829PABPC410096.970Panthera_tigris_altaica
ENSNGAG00000018292Pabpc410096.818ENSPTRG00000000573PABPC410096.818Pan_troglodytes
ENSNGAG00000018292Pabpc410097.121ENSPANG00000009484PABPC410097.121Papio_anubis
ENSNGAG00000018292Pabpc49983.845ENSPKIG00000025356pabpc49984.469Paramormyrops_kingsleyae
ENSNGAG00000018292Pabpc49989.683ENSPSIG00000016892PABPC410089.683Pelodiscus_sinensis
ENSNGAG00000018292Pabpc410083.683ENSPMGG00000009073pabpc49982.581Periophthalmus_magnuspinnatus
ENSNGAG00000018292Pabpc410093.634ENSPEMG00000024193-9993.634Peromyscus_maniculatus_bairdii
ENSNGAG00000018292Pabpc410095.606ENSPEMG00000023569-9995.606Peromyscus_maniculatus_bairdii
ENSNGAG00000018292Pabpc48873.298ENSPMAG00000002836pabpc410073.776Petromyzon_marinus
ENSNGAG00000018292Pabpc49572.899ENSPMAG00000007885pabpc410072.857Petromyzon_marinus
ENSNGAG00000018292Pabpc49894.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSNGAG00000018292Pabpc410084.051ENSPFOG00000002682pabpc410085.167Poecilia_formosa
ENSNGAG00000018292Pabpc410083.892ENSPLAG00000010112pabpc410085.008Poecilia_latipinna
ENSNGAG00000018292Pabpc49984.603ENSPMEG00000019739pabpc410085.327Poecilia_mexicana
ENSNGAG00000018292Pabpc410084.370ENSPREG00000001589pabpc410085.008Poecilia_reticulata
ENSNGAG00000018292Pabpc410096.818ENSPPYG00000001506PABPC410096.818Pongo_abelii
ENSNGAG00000018292Pabpc410091.818ENSPCAG00000003341PABPC410091.818Procavia_capensis
ENSNGAG00000018292Pabpc49979.796ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSNGAG00000018292Pabpc410096.672ENSPCOG00000023725-10096.672Propithecus_coquereli
ENSNGAG00000018292Pabpc49995.966ENSPVAG00000002187PABPC410095.966Pteropus_vampyrus
ENSNGAG00000018292Pabpc410084.554ENSPNYG00000006134pabpc410085.191Pundamilia_nyererei
ENSNGAG00000018292Pabpc410083.861ENSPNAG00000024355pabpc410084.494Pygocentrus_nattereri
ENSNGAG00000018292Pabpc410098.137ENSRNOG00000015642Pabpc410098.137Rattus_norvegicus
ENSNGAG00000018292Pabpc410095.963ENSRNOG00000028592AABR07035074.110095.963Rattus_norvegicus
ENSNGAG00000018292Pabpc410096.970ENSRBIG00000039761PABPC410096.970Rhinopithecus_bieti
ENSNGAG00000018292Pabpc410096.970ENSRROG00000033355PABPC410096.970Rhinopithecus_roxellana
ENSNGAG00000018292Pabpc410096.970ENSSBOG00000026193PABPC410096.970Saimiri_boliviensis_boliviensis
ENSNGAG00000018292Pabpc49890.291ENSSHAG00000018139PABPC410089.841Sarcophilus_harrisii
ENSNGAG00000018292Pabpc49985.173ENSSFOG00015023514pabpc49985.173Scleropages_formosus
ENSNGAG00000018292Pabpc49983.897ENSSMAG00000009007pabpc49984.677Scophthalmus_maximus
ENSNGAG00000018292Pabpc49984.330ENSSDUG00000012683pabpc410084.554Seriola_dumerili
ENSNGAG00000018292Pabpc49985.588ENSSLDG00000013025pabpc410084.554Seriola_lalandi_dorsalis
ENSNGAG00000018292Pabpc410089.242ENSSARG00000000310PABPC410089.242Sorex_araneus
ENSNGAG00000018292Pabpc49990.545ENSSPUG00000003204PABPC410090.545Sphenodon_punctatus
ENSNGAG00000018292Pabpc49984.653ENSSPAG00000009252pabpc49790.359Stegastes_partitus
ENSNGAG00000018292Pabpc410096.970ENSSSCG00000003660-10096.970Sus_scrofa
ENSNGAG00000018292Pabpc48951.903ENSSSCG00000036170-9651.903Sus_scrofa
ENSNGAG00000018292Pabpc49985.758ENSTGUG00000001266PABPC410085.758Taeniopygia_guttata
ENSNGAG00000018292Pabpc410083.494ENSTRUG00000005907pabpc49984.135Takifugu_rubripes
ENSNGAG00000018292Pabpc410079.677ENSTNIG00000016902pabpc49979.677Tetraodon_nigroviridis
ENSNGAG00000018292Pabpc49985.210ENSTBEG00000009035PABPC410085.210Tupaia_belangeri
ENSNGAG00000018292Pabpc49980.651ENSTTRG00000014340PABPC410084.706Tursiops_truncatus
ENSNGAG00000018292Pabpc410096.672ENSUAMG00000000303PABPC410096.672Ursus_americanus
ENSNGAG00000018292Pabpc410096.667ENSUMAG00000019585PABPC410098.113Ursus_maritimus
ENSNGAG00000018292Pabpc48396.429ENSVPAG00000010041PABPC47796.429Vicugna_pacos
ENSNGAG00000018292Pabpc410096.830ENSVVUG00000005215PABPC410096.830Vulpes_vulpes
ENSNGAG00000018292Pabpc49982.194ENSXETG00000010946pabpc410082.194Xenopus_tropicalis
ENSNGAG00000018292Pabpc46097.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSNGAG00000018292Pabpc49983.303ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSNGAG00000018292Pabpc410084.211ENSXMAG00000019007pabpc410084.848Xiphophorus_maculatus

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