EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNGAG00000018317 (Gene tree)
Gene ID
-
Gene Symbol
Prdm5
Alias
4432417F03Rik|6530401I24Rik|E130112L17Rik|PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Nannospalax_galili
Status
putative
Strand
Minus strand
Length
193172 bases
Position
chrKL202846.1:1555126-1748297
Accession
103743360
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNGAP00000018085zf-C2H2PF00096.261e-49110
ENSNGAP00000018085zf-C2H2PF00096.261e-49210
ENSNGAP00000018085zf-C2H2PF00096.261e-49310
ENSNGAP00000018085zf-C2H2PF00096.261e-49410
ENSNGAP00000018085zf-C2H2PF00096.261e-49510
ENSNGAP00000018085zf-C2H2PF00096.261e-49610
ENSNGAP00000018085zf-C2H2PF00096.261e-49710
ENSNGAP00000018085zf-C2H2PF00096.261e-49810
ENSNGAP00000018085zf-C2H2PF00096.261e-49910
ENSNGAP00000018085zf-C2H2PF00096.261e-491010
ENSNGAP00000018086zf-C2H2PF00096.264.2e-2715
ENSNGAP00000018086zf-C2H2PF00096.264.2e-2725
ENSNGAP00000018086zf-C2H2PF00096.264.2e-2735
ENSNGAP00000018086zf-C2H2PF00096.264.2e-2745
ENSNGAP00000018086zf-C2H2PF00096.264.2e-2755
ENSNGAP00000018085zf-metPF12874.73.1e-1613
ENSNGAP00000018085zf-metPF12874.73.1e-1623
ENSNGAP00000018085zf-metPF12874.73.1e-1633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNGAT00000023728-666-ENSNGAP00000018086221 (aa)--
ENSNGAT00000023727-1248XM_008844616ENSNGAP00000018085415 (aa)XP_008842838-
Gene Model
Click here to download ENSNGAG00000018317's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000018317's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNGAG00000018317Prdm57736.296ENSNGAG00000020815Scrt27836.296
ENSNGAG00000018317Prdm57444.118ENSNGAG00000017185Snai15844.118
ENSNGAG00000018317Prdm56746.875ENSNGAG00000000088Gm38546146.875
ENSNGAG00000018317Prdm57444.056ENSNGAG00000024130-9947.009
ENSNGAG00000018317Prdm58643.529ENSNGAG00000018480Prdm126643.529
ENSNGAG00000018317Prdm58144.915ENSNGAG00000019166Zfp947244.915
ENSNGAG00000018317Prdm57046.512ENSNGAG00000020281Zfp6379142.353
ENSNGAG00000018317Prdm57341.365ENSNGAG00000017870Zfp7685343.307
ENSNGAG00000018317Prdm56942.157ENSNGAG00000009442-5742.157
ENSNGAG00000018317Prdm57338.991ENSNGAG00000015777Zim16543.165
ENSNGAG00000018317Prdm59740.476ENSNGAG00000011769Zfp354a8940.476
ENSNGAG00000018317Prdm58751.613ENSNGAG00000011056Zfp2367843.878
ENSNGAG00000018317Prdm58940.909ENSNGAG00000015897Zfp5608740.909
ENSNGAG00000018317Prdm57835.106ENSNGAG00000022587Zfp3198840.441
ENSNGAG00000018317Prdm57641.004ENSNGAG00000016319Zfp16047.863
ENSNGAG00000018317Prdm57538.750ENSNGAG00000010366Zfp6525036.242
ENSNGAG00000018317Prdm56239.326ENSNGAG00000002579Zfp6465636.036
ENSNGAG00000018317Prdm57047.482ENSNGAG00000019853Zfp397439.855
ENSNGAG00000018317Prdm57436.792ENSNGAG00000022025Zfp4239338.947
ENSNGAG00000018317Prdm58340.426ENSNGAG00000010268Patz15332.353
ENSNGAG00000018317Prdm57142.400ENSNGAG00000012888Zfp6285240.994
ENSNGAG00000018317Prdm57840.972ENSNGAG00000003333Gfi1b6143.750
ENSNGAG00000018317Prdm57945.918ENSNGAG00000016891Zfp3177845.918
ENSNGAG00000018317Prdm57541.860ENSNGAG00000016004Zfp8657043.210
ENSNGAG00000018317Prdm56539.726ENSNGAG00000007174Ovol25739.726
ENSNGAG00000018317Prdm57649.296ENSNGAG00000020695Zfp267842.742
ENSNGAG00000018317Prdm56746.667ENSNGAG00000001555Zfp5748630.564
ENSNGAG00000018317Prdm58248.980ENSNGAG00000010473-7248.980
ENSNGAG00000018317Prdm57544.094ENSNGAG00000022234Wt15144.094
ENSNGAG00000018317Prdm57741.584ENSNGAG000000148092610008E11Rik9141.584
ENSNGAG00000018317Prdm56748.182ENSNGAG00000014357Zfp6615948.182
ENSNGAG00000018317Prdm57549.167ENSNGAG00000016559-6749.167
ENSNGAG00000018317Prdm57436.301ENSNGAG00000018331Zfp647335.652
ENSNGAG00000018317Prdm57443.846ENSNGAG00000002549-9945.133
ENSNGAG00000018317Prdm57537.288ENSNGAG00000011802Zfp7846237.288
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNGAG00000018317Prdm510098.101ENSG00000138738PRDM510098.101Homo_sapiens
ENSNGAG00000018317Prdm510088.000ENSAPOG00000023220prdm510088.000Acanthochromis_polyacanthus
ENSNGAG00000018317Prdm58790.881ENSAMEG00000003050PRDM510090.881Ailuropoda_melanoleuca
ENSNGAG00000018317Prdm510088.000ENSACIG00000000406prdm510088.000Amphilophus_citrinellus
ENSNGAG00000018317Prdm510088.000ENSAOCG00000014806prdm510088.000Amphiprion_ocellaris
ENSNGAG00000018317Prdm510048.864ENSAPEG00000016846prdm510072.404Amphiprion_percula
ENSNGAG00000018317Prdm510088.000ENSATEG00000013829prdm510088.000Anabas_testudineus
ENSNGAG00000018317Prdm59389.873ENSAPLG00000013828PRDM510089.873Anas_platyrhynchos
ENSNGAG00000018317Prdm510090.000ENSACAG00000012999PRDM510090.000Anolis_carolinensis
ENSNGAG00000018317Prdm510097.468ENSANAG00000027411PRDM510097.468Aotus_nancymaae
ENSNGAG00000018317Prdm510088.000ENSACLG00000017996prdm510088.000Astatotilapia_calliptera
ENSNGAG00000018317Prdm58788.782ENSAMXG00000041864prdm59788.782Astyanax_mexicanus
ENSNGAG00000018317Prdm510097.152ENSBTAG00000012111PRDM510097.152Bos_taurus
ENSNGAG00000018317Prdm510097.468ENSCJAG00000003133PRDM510097.468Callithrix_jacchus
ENSNGAG00000018317Prdm58898.492ENSCAFG00000004179PRDM59698.492Canis_familiaris
ENSNGAG00000018317Prdm510097.785ENSCAFG00020017685PRDM510097.785Canis_lupus_dingo
ENSNGAG00000018317Prdm510096.835ENSCHIG00000018772PRDM510096.835Capra_hircus
ENSNGAG00000018317Prdm59197.500ENSTSYG00000009630PRDM59597.328Carlito_syrichta
ENSNGAG00000018317Prdm58697.368ENSCAPG00000015217PRDM510097.368Cavia_aperea
ENSNGAG00000018317Prdm59397.656ENSCPOG00000012883PRDM510097.785Cavia_porcellus
ENSNGAG00000018317Prdm510097.785ENSCCAG00000023157PRDM510097.785Cebus_capucinus
ENSNGAG00000018317Prdm510098.101ENSCATG00000042510PRDM510098.101Cercocebus_atys
ENSNGAG00000018317Prdm59397.396ENSCLAG00000005392PRDM510097.785Chinchilla_lanigera
ENSNGAG00000018317Prdm510096.667ENSCSAG00000003729PRDM510098.101Chlorocebus_sabaeus
ENSNGAG00000018317Prdm59996.000ENSCHOG00000007801PRDM58996.000Choloepus_hoffmanni
ENSNGAG00000018317Prdm510090.190ENSCPBG00000024735PRDM510090.190Chrysemys_picta_bellii
ENSNGAG00000018317Prdm510098.101ENSCANG00000036807PRDM510098.101Colobus_angolensis_palliatus
ENSNGAG00000018317Prdm510099.095ENSCGRG00001010581Prdm510099.095Cricetulus_griseus_chok1gshd
ENSNGAG00000018317Prdm58898.667ENSCGRG00000010996-9998.524Cricetulus_griseus_crigri
ENSNGAG00000018317Prdm510087.333ENSCSEG00000019979prdm510087.333Cynoglossus_semilaevis
ENSNGAG00000018317Prdm510088.000ENSCVAG00000013692prdm59988.000Cyprinodon_variegatus
ENSNGAG00000018317Prdm59890.411ENSDARG00000006288prdm59987.821Danio_rerio
ENSNGAG00000018317Prdm58796.845ENSDNOG00000002009PRDM510096.845Dasypus_novemcinctus
ENSNGAG00000018317Prdm510096.145ENSDORG00000007739Prdm510096.145Dipodomys_ordii
ENSNGAG00000018317Prdm58895.726ENSETEG00000020268PRDM58089.855Echinops_telfairi
ENSNGAG00000018317Prdm59990.604ENSEBUG00000004301prdm510090.604Eptatretus_burgeri
ENSNGAG00000018317Prdm510097.785ENSEASG00005018365PRDM510097.785Equus_asinus_asinus
ENSNGAG00000018317Prdm510085.577ENSECAG00000024747-10085.577Equus_caballus
ENSNGAG00000018317Prdm59997.826ENSECAG00000011516PRDM59097.826Equus_caballus
ENSNGAG00000018317Prdm59995.420ENSEEUG00000010306PRDM510095.420Erinaceus_europaeus
ENSNGAG00000018317Prdm59891.803ENSELUG00000005894prdm59388.546Esox_lucius
ENSNGAG00000018317Prdm59998.500ENSFCAG00000025656PRDM510097.468Felis_catus
ENSNGAG00000018317Prdm59944.828ENSFALG00000008381PRDM59944.828Ficedula_albicollis
ENSNGAG00000018317Prdm510097.590ENSFDAG00000021361PRDM510098.101Fukomys_damarensis
ENSNGAG00000018317Prdm59889.726ENSFHEG00000013040prdm59989.726Fundulus_heteroclitus
ENSNGAG00000018317Prdm510071.749ENSGMOG00000012038prdm510091.667Gadus_morhua
ENSNGAG00000018317Prdm510090.000ENSGALG00000011963PRDM510090.000Gallus_gallus
ENSNGAG00000018317Prdm59891.803ENSGAFG00000019233prdm59588.546Gambusia_affinis
ENSNGAG00000018317Prdm59891.803ENSGAGG00000020362PRDM59991.803Gopherus_agassizii
ENSNGAG00000018317Prdm510098.101ENSGGOG00000013562PRDM510098.101Gorilla_gorilla
ENSNGAG00000018317Prdm510088.000ENSHBUG00000023375prdm510088.000Haplochromis_burtoni
ENSNGAG00000018317Prdm510085.301ENSHGLG00000003010PRDM510090.602Heterocephalus_glaber_female
ENSNGAG00000018317Prdm510097.785ENSHGLG00100003696PRDM510097.785Heterocephalus_glaber_male
ENSNGAG00000018317Prdm59988.591ENSHCOG00000012131prdm59988.591Hippocampus_comes
ENSNGAG00000018317Prdm59891.667ENSIPUG00000001248prdm510087.975Ictalurus_punctatus
ENSNGAG00000018317Prdm59394.010ENSSTOG00000004741PRDM510094.211Ictidomys_tridecemlineatus
ENSNGAG00000018317Prdm59798.000ENSJJAG00000011464Prdm510098.000Jaculus_jaculus
ENSNGAG00000018317Prdm510087.333ENSKMAG00000013663prdm510087.342Kryptolebias_marmoratus
ENSNGAG00000018317Prdm510088.000ENSLBEG00000022736prdm510088.000Labrus_bergylta
ENSNGAG00000018317Prdm58790.190ENSLACG00000009187PRDM59990.190Latimeria_chalumnae
ENSNGAG00000018317Prdm59989.933ENSLOCG00000009778prdm59989.933Lepisosteus_oculatus
ENSNGAG00000018317Prdm510095.333ENSLAFG00000006532PRDM510097.468Loxodonta_africana
ENSNGAG00000018317Prdm510098.101ENSMFAG00000045845PRDM510098.101Macaca_fascicularis
ENSNGAG00000018317Prdm510098.101ENSMMUG00000003249PRDM510098.101Macaca_mulatta
ENSNGAG00000018317Prdm510098.101ENSMNEG00000019018PRDM510098.101Macaca_nemestrina
ENSNGAG00000018317Prdm59398.101ENSMLEG00000023145PRDM510098.101Mandrillus_leucophaeus
ENSNGAG00000018317Prdm510087.658ENSMAMG00000013419prdm510087.658Mastacembelus_armatus
ENSNGAG00000018317Prdm510088.000ENSMZEG00005020645prdm510088.000Maylandia_zebra
ENSNGAG00000018317Prdm59389.557ENSMGAG00000010710PRDM510089.557Meleagris_gallopavo
ENSNGAG00000018317Prdm510099.095ENSMAUG00000006768Prdm510099.095Mesocricetus_auratus
ENSNGAG00000018317Prdm510097.785ENSMICG00000001459PRDM510097.785Microcebus_murinus
ENSNGAG00000018317Prdm510099.095ENSMOCG00000016267Prdm510099.095Microtus_ochrogaster
ENSNGAG00000018317Prdm510088.000ENSMMOG00000006035prdm510088.000Mola_mola
ENSNGAG00000018317Prdm510090.000ENSMODG00000018942PRDM510090.000Monodelphis_domestica
ENSNGAG00000018317Prdm510088.000ENSMALG00000013934prdm59988.000Monopterus_albus
ENSNGAG00000018317Prdm510099.548MGP_CAROLIEiJ_G0028463Prdm510099.548Mus_caroli
ENSNGAG00000018317Prdm510099.548ENSMUSG00000029913Prdm510099.548Mus_musculus
ENSNGAG00000018317Prdm510099.548MGP_PahariEiJ_G0022203Prdm510099.548Mus_pahari
ENSNGAG00000018317Prdm510099.548MGP_SPRETEiJ_G0029467Prdm510099.548Mus_spretus
ENSNGAG00000018317Prdm510097.152ENSMPUG00000017415PRDM510097.152Mustela_putorius_furo
ENSNGAG00000018317Prdm58789.688ENSMLUG00000006097PRDM510089.688Myotis_lucifugus
ENSNGAG00000018317Prdm510061.585ENSNBRG00000004976prdm510080.189Neolamprologus_brichardi
ENSNGAG00000018317Prdm510098.101ENSNLEG00000009107PRDM510098.101Nomascus_leucogenys
ENSNGAG00000018317Prdm59089.831ENSMEUG00000006576-6796.774Notamacropus_eugenii
ENSNGAG00000018317Prdm58396.465ENSOPRG00000011066-6096.465Ochotona_princeps
ENSNGAG00000018317Prdm59997.343ENSODEG00000009133PRDM510097.343Octodon_degus
ENSNGAG00000018317Prdm510088.000ENSONIG00000003111prdm59987.658Oreochromis_niloticus
ENSNGAG00000018317Prdm57587.778ENSOANG00000006197-10087.778Ornithorhynchus_anatinus
ENSNGAG00000018317Prdm59990.452ENSOANG00000015109PRDM59790.909Ornithorhynchus_anatinus
ENSNGAG00000018317Prdm59084.177ENSOCUG00000013454PRDM510086.709Oryctolagus_cuniculus
ENSNGAG00000018317Prdm510088.000ENSORLG00000016247prdm510088.000Oryzias_latipes
ENSNGAG00000018317Prdm510088.000ENSORLG00020018051prdm510088.000Oryzias_latipes_hni
ENSNGAG00000018317Prdm510088.000ENSORLG00015013760prdm510088.000Oryzias_latipes_hsok
ENSNGAG00000018317Prdm510088.000ENSOMEG00000005143prdm510088.000Oryzias_melastigma
ENSNGAG00000018317Prdm57697.333ENSOGAG00000009996PRDM59397.333Otolemur_garnettii
ENSNGAG00000018317Prdm59196.992ENSOARG00000015473PRDM510098.485Ovis_aries
ENSNGAG00000018317Prdm59398.101ENSPPAG00000043045PRDM510098.473Pan_paniscus
ENSNGAG00000018317Prdm59998.500ENSPPRG00000001020PRDM510097.468Panthera_pardus
ENSNGAG00000018317Prdm59397.468ENSPTIG00000010807PRDM59597.468Panthera_tigris_altaica
ENSNGAG00000018317Prdm510098.101ENSPTRG00000016403PRDM510098.101Pan_troglodytes
ENSNGAG00000018317Prdm510098.101ENSPANG00000023612PRDM510098.101Papio_anubis
ENSNGAG00000018317Prdm510086.441ENSPKIG00000015492prdm59886.441Paramormyrops_kingsleyae
ENSNGAG00000018317Prdm510090.190ENSPSIG00000013505PRDM510090.190Pelodiscus_sinensis
ENSNGAG00000018317Prdm510087.333ENSPMGG00000012622prdm59987.333Periophthalmus_magnuspinnatus
ENSNGAG00000018317Prdm57191.753ENSPMAG00000005248prdm510091.753Petromyzon_marinus
ENSNGAG00000018317Prdm59842.105ENSPFOG00000018630prdm59942.368Poecilia_formosa
ENSNGAG00000018317Prdm510088.000ENSPLAG00000014148prdm510088.000Poecilia_latipinna
ENSNGAG00000018317Prdm510088.000ENSPMEG00000018002prdm510088.000Poecilia_mexicana
ENSNGAG00000018317Prdm510088.000ENSPREG00000018366prdm510088.000Poecilia_reticulata
ENSNGAG00000018317Prdm510098.101ENSPPYG00000015031PRDM510098.101Pongo_abelii
ENSNGAG00000018317Prdm58895.333ENSPCAG00000011671PRDM59695.333Procavia_capensis
ENSNGAG00000018317Prdm510098.095ENSPCOG00000022828PRDM510098.095Propithecus_coquereli
ENSNGAG00000018317Prdm59393.671ENSPVAG00000012309PRDM510093.671Pteropus_vampyrus
ENSNGAG00000018317Prdm510088.000ENSPNYG00000012194prdm510088.000Pundamilia_nyererei
ENSNGAG00000018317Prdm58983.974ENSPNAG00000023191-9786.301Pygocentrus_nattereri
ENSNGAG00000018317Prdm59890.411ENSPNAG00000026181prdm59988.782Pygocentrus_nattereri
ENSNGAG00000018317Prdm59992.580ENSRNOG00000023679Prdm59992.580Rattus_norvegicus
ENSNGAG00000018317Prdm510098.101ENSRBIG00000041307PRDM510098.101Rhinopithecus_bieti
ENSNGAG00000018317Prdm58890.741ENSRROG00000035343PRDM59690.741Rhinopithecus_roxellana
ENSNGAG00000018317Prdm510097.785ENSSBOG00000022100PRDM510097.785Saimiri_boliviensis_boliviensis
ENSNGAG00000018317Prdm58590.164ENSSHAG00000003250PRDM59990.164Sarcophilus_harrisii
ENSNGAG00000018317Prdm510088.667ENSSFOG00015020478prdm59988.667Scleropages_formosus
ENSNGAG00000018317Prdm510088.000ENSSMAG00000018844prdm510088.000Scophthalmus_maximus
ENSNGAG00000018317Prdm59891.803ENSSDUG00000020397prdm510088.000Seriola_dumerili
ENSNGAG00000018317Prdm59891.753ENSSLDG00000013353prdm510088.000Seriola_lalandi_dorsalis
ENSNGAG00000018317Prdm59398.765ENSSARG00000014129-5998.765Sorex_araneus
ENSNGAG00000018317Prdm510090.498ENSSPUG00000009941PRDM510090.498Sphenodon_punctatus
ENSNGAG00000018317Prdm510088.000ENSSPAG00000013866prdm510088.000Stegastes_partitus
ENSNGAG00000018317Prdm510097.785ENSSSCG00000009101PRDM510097.785Sus_scrofa
ENSNGAG00000018317Prdm59389.873ENSTGUG00000001920PRDM510089.873Taeniopygia_guttata
ENSNGAG00000018317Prdm510088.000ENSTRUG00000013850prdm510088.000Takifugu_rubripes
ENSNGAG00000018317Prdm510074.172ENSTNIG00000005901prdm510070.189Tetraodon_nigroviridis
ENSNGAG00000018317Prdm59375.168ENSTBEG00000015386PRDM58675.168Tupaia_belangeri
ENSNGAG00000018317Prdm510097.152ENSTTRG00000010996PRDM510097.152Tursiops_truncatus
ENSNGAG00000018317Prdm59196.689ENSUAMG00000009994PRDM58496.581Ursus_americanus
ENSNGAG00000018317Prdm59397.785ENSUMAG00000003733PRDM59997.785Ursus_maritimus
ENSNGAG00000018317Prdm59680.063ENSVPAG00000007435PRDM510080.063Vicugna_pacos
ENSNGAG00000018317Prdm59097.785ENSVVUG00000013192PRDM510097.785Vulpes_vulpes
ENSNGAG00000018317Prdm510082.979ENSXETG00000002101prdm510082.979Xenopus_tropicalis
ENSNGAG00000018317Prdm510088.000ENSXCOG00000008567prdm510088.000Xiphophorus_couchianus
ENSNGAG00000018317Prdm59891.803ENSXMAG00000013825prdm510088.000Xiphophorus_maculatus

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