EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000018480 (Gene tree)
Gene ID: 103727742
Gene Symbol: Prdm12
Alias: LOC381359
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 16136 bases
Position: chrKL199312.1:6551104-6567239
Accession: 103727742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000018308	zf-C2H2	PF00096.26	7.7e-13	1	2
ENSNGAP00000018308	zf-C2H2	PF00096.26	7.7e-13	2	2
ENSNGAP00000018308	zf-met	PF12874.7	6.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000023954	-	1059	XM_008825753	ENSNGAP00000018308	352 (aa)	XP_008823975	UPI0004ECFCAD

Gene Model

Click here to download ENSNGAG00000018480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000018480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000018480	Prdm12	66	43.529	ENSNGAG00000018317	Prdm5	86	43.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000018480	Prdm12	94	97.576	ENSG00000130711	PRDM12	89	97.859	Homo_sapiens
ENSNGAG00000018480	Prdm12	99	74.219	ENSAPOG00000016051	prdm12b	90	80.580	Acanthochromis_polyacanthus
ENSNGAG00000018480	Prdm12	98	65.607	ENSAPOG00000018234	-	92	67.160	Acanthochromis_polyacanthus
ENSNGAG00000018480	Prdm12	92	93.808	ENSAMEG00000016234	PRDM12	99	93.808	Ailuropoda_melanoleuca
ENSNGAG00000018480	Prdm12	93	80.233	ENSACIG00000019578	prdm12b	90	81.471	Amphilophus_citrinellus
ENSNGAG00000018480	Prdm12	99	75.989	ENSACIG00000005193	-	91	80.290	Amphilophus_citrinellus
ENSNGAG00000018480	Prdm12	99	75.526	ENSAOCG00000015040	prdm12b	90	82.111	Amphiprion_ocellaris
ENSNGAG00000018480	Prdm12	100	71.540	ENSAPEG00000022849	-	87	79.403	Amphiprion_percula
ENSNGAG00000018480	Prdm12	99	76.127	ENSAPEG00000015092	prdm12b	90	82.840	Amphiprion_percula
ENSNGAG00000018480	Prdm12	92	82.371	ENSATEG00000014595	-	96	82.371	Anabas_testudineus
ENSNGAG00000018480	Prdm12	95	96.176	ENSANAG00000020616	PRDM12	100	96.176	Aotus_nancymaae
ENSNGAG00000018480	Prdm12	99	73.096	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSNGAG00000018480	Prdm12	99	78.237	ENSACLG00000011876	prdm12b	90	83.792	Astatotilapia_calliptera
ENSNGAG00000018480	Prdm12	99	81.081	ENSAMXG00000033665	prdm12b	90	88.554	Astyanax_mexicanus
ENSNGAG00000018480	Prdm12	99	79.167	ENSAMXG00000008540	PRDM12	90	84.356	Astyanax_mexicanus
ENSNGAG00000018480	Prdm12	100	95.291	ENSBTAG00000023797	PRDM12	100	95.291	Bos_taurus
ENSNGAG00000018480	Prdm12	100	95.000	ENSCJAG00000020540	PRDM12	100	95.000	Callithrix_jacchus
ENSNGAG00000018480	Prdm12	82	97.561	ENSCAFG00000023076	PRDM12	88	97.535	Canis_familiaris
ENSNGAG00000018480	Prdm12	100	95.055	ENSCAFG00020024046	PRDM12	100	95.055	Canis_lupus_dingo
ENSNGAG00000018480	Prdm12	100	95.304	ENSCHIG00000025005	PRDM12	100	95.304	Capra_hircus
ENSNGAG00000018480	Prdm12	89	97.764	ENSCPOG00000005901	PRDM12	95	97.764	Cavia_porcellus
ENSNGAG00000018480	Prdm12	100	94.766	ENSCCAG00000037485	PRDM12	100	94.766	Cebus_capucinus
ENSNGAG00000018480	Prdm12	100	94.766	ENSCATG00000020327	PRDM12	100	94.766	Cercocebus_atys
ENSNGAG00000018480	Prdm12	94	97.590	ENSCLAG00000005499	PRDM12	91	97.590	Chinchilla_lanigera
ENSNGAG00000018480	Prdm12	100	94.505	ENSCSAG00000014756	PRDM12	100	94.505	Chlorocebus_sabaeus
ENSNGAG00000018480	Prdm12	100	88.827	ENSCPBG00000022628	PRDM12	92	93.272	Chrysemys_picta_bellii
ENSNGAG00000018480	Prdm12	100	95.082	ENSCGRG00001015005	Prdm12	100	95.082	Cricetulus_griseus_chok1gshd
ENSNGAG00000018480	Prdm12	99	72.564	ENSCVAG00000000944	-	89	78.386	Cyprinodon_variegatus
ENSNGAG00000018480	Prdm12	99	77.358	ENSCVAG00000017166	prdm12b	90	83.234	Cyprinodon_variegatus
ENSNGAG00000018480	Prdm12	99	81.148	ENSDARG00000007430	prdm12b	90	87.234	Danio_rerio
ENSNGAG00000018480	Prdm12	99	95.014	ENSDNOG00000042302	PRDM12	99	95.014	Dasypus_novemcinctus
ENSNGAG00000018480	Prdm12	92	62.678	ENSEBUG00000016780	prdm12b	77	64.183	Eptatretus_burgeri
ENSNGAG00000018480	Prdm12	100	95.304	ENSEASG00005008472	PRDM12	100	95.304	Equus_asinus_asinus
ENSNGAG00000018480	Prdm12	100	95.028	ENSECAG00000005933	PRDM12	100	95.028	Equus_caballus
ENSNGAG00000018480	Prdm12	99	80.054	ENSELUG00000009905	prdm12b	90	85.928	Esox_lucius
ENSNGAG00000018480	Prdm12	99	76.944	ENSELUG00000013674	PRDM12	89	83.025	Esox_lucius
ENSNGAG00000018480	Prdm12	100	95.317	ENSFCAG00000043086	PRDM12	100	95.317	Felis_catus
ENSNGAG00000018480	Prdm12	100	88.827	ENSFALG00000001445	PRDM12	82	93.272	Ficedula_albicollis
ENSNGAG00000018480	Prdm12	99	76.738	ENSFHEG00000003944	prdm12b	90	83.086	Fundulus_heteroclitus
ENSNGAG00000018480	Prdm12	99	73.057	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSNGAG00000018480	Prdm12	92	83.283	ENSGMOG00000011797	prdm12b	92	83.692	Gadus_morhua
ENSNGAG00000018480	Prdm12	100	88.827	ENSGALG00000003895	PRDM12	92	93.272	Gallus_gallus
ENSNGAG00000018480	Prdm12	100	76.533	ENSGAFG00000010827	prdm12b	89	83.434	Gambusia_affinis
ENSNGAG00000018480	Prdm12	100	77.688	ENSGACG00000016713	prdm12b	90	83.533	Gasterosteus_aculeatus
ENSNGAG00000018480	Prdm12	100	89.106	ENSGAGG00000014083	PRDM12	92	93.578	Gopherus_agassizii
ENSNGAG00000018480	Prdm12	94	97.273	ENSGGOG00000010568	PRDM12	89	97.554	Gorilla_gorilla
ENSNGAG00000018480	Prdm12	99	73.096	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSNGAG00000018480	Prdm12	99	76.738	ENSHBUG00000022878	prdm12b	90	81.953	Haplochromis_burtoni
ENSNGAG00000018480	Prdm12	94	97.590	ENSHGLG00000013939	PRDM12	90	97.859	Heterocephalus_glaber_female
ENSNGAG00000018480	Prdm12	92	80.702	ENSHCOG00000003663	prdm12b	87	80.117	Hippocampus_comes
ENSNGAG00000018480	Prdm12	99	74.238	ENSHCOG00000021167	-	93	77.644	Hippocampus_comes
ENSNGAG00000018480	Prdm12	99	76.648	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSNGAG00000018480	Prdm12	99	81.250	ENSIPUG00000017053	prdm12b	90	87.349	Ictalurus_punctatus
ENSNGAG00000018480	Prdm12	99	93.296	ENSSTOG00000005986	PRDM12	86	99.083	Ictidomys_tridecemlineatus
ENSNGAG00000018480	Prdm12	94	98.788	ENSJJAG00000005424	Prdm12	100	98.788	Jaculus_jaculus
ENSNGAG00000018480	Prdm12	99	77.966	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSNGAG00000018480	Prdm12	93	78.492	ENSKMAG00000016921	prdm12b	87	79.037	Kryptolebias_marmoratus
ENSNGAG00000018480	Prdm12	92	83.533	ENSLBEG00000017769	prdm12b	88	83.832	Labrus_bergylta
ENSNGAG00000018480	Prdm12	99	75.263	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSNGAG00000018480	Prdm12	99	86.969	ENSLACG00000017560	PRDM12	92	90.491	Latimeria_chalumnae
ENSNGAG00000018480	Prdm12	99	80.992	ENSLOCG00000005429	prdm12b	90	88.037	Lepisosteus_oculatus
ENSNGAG00000018480	Prdm12	94	96.726	ENSLAFG00000006979	PRDM12	89	96.697	Loxodonta_africana
ENSNGAG00000018480	Prdm12	100	90.736	ENSMFAG00000040322	PRDM12	89	97.859	Macaca_fascicularis
ENSNGAG00000018480	Prdm12	100	94.766	ENSMNEG00000037234	PRDM12	100	94.766	Macaca_nemestrina
ENSNGAG00000018480	Prdm12	92	81.250	ENSMAMG00000018988	-	86	81.548	Mastacembelus_armatus
ENSNGAG00000018480	Prdm12	99	76.267	ENSMAMG00000013212	prdm12b	90	83.086	Mastacembelus_armatus
ENSNGAG00000018480	Prdm12	99	72.727	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSNGAG00000018480	Prdm12	97	90.173	ENSMGAG00000005438	PRDM12	92	93.272	Meleagris_gallopavo
ENSNGAG00000018480	Prdm12	100	95.068	ENSMAUG00000013040	Prdm12	100	95.068	Mesocricetus_auratus
ENSNGAG00000018480	Prdm12	100	94.475	ENSMICG00000015480	PRDM12	100	94.475	Microcebus_murinus
ENSNGAG00000018480	Prdm12	99	94.286	ENSMOCG00000021026	Prdm12	93	96.491	Microtus_ochrogaster
ENSNGAG00000018480	Prdm12	100	90.986	ENSMODG00000012108	PRDM12	92	95.107	Monodelphis_domestica
ENSNGAG00000018480	Prdm12	99	66.048	ENSMALG00000021901	prdm12b	88	71.471	Monopterus_albus
ENSNGAG00000018480	Prdm12	100	95.068	MGP_CAROLIEiJ_G0023414	Prdm12	100	95.068	Mus_caroli
ENSNGAG00000018480	Prdm12	100	95.068	ENSMUSG00000079466	Prdm12	100	95.068	Mus_musculus
ENSNGAG00000018480	Prdm12	100	95.068	MGP_PahariEiJ_G0024871	Prdm12	100	95.068	Mus_pahari
ENSNGAG00000018480	Prdm12	100	95.068	MGP_SPRETEiJ_G0024331	Prdm12	100	95.068	Mus_spretus
ENSNGAG00000018480	Prdm12	99	75.862	ENSNBRG00000006727	prdm12b	90	81.232	Neolamprologus_brichardi
ENSNGAG00000018480	Prdm12	99	74.586	ENSNBRG00000024312	-	93	77.910	Neolamprologus_brichardi
ENSNGAG00000018480	Prdm12	100	80.563	ENSMEUG00000003828	PRDM12	92	83.792	Notamacropus_eugenii
ENSNGAG00000018480	Prdm12	94	97.273	ENSOPRG00000008680	PRDM12	100	97.273	Ochotona_princeps
ENSNGAG00000018480	Prdm12	95	96.765	ENSODEG00000016282	PRDM12	64	96.765	Octodon_degus
ENSNGAG00000018480	Prdm12	61	88.688	ENSOANG00000001043	PRDM12	88	96.842	Ornithorhynchus_anatinus
ENSNGAG00000018480	Prdm12	89	91.987	ENSOCUG00000008241	PRDM12	97	93.750	Oryctolagus_cuniculus
ENSNGAG00000018480	Prdm12	99	77.778	ENSORLG00000007114	prdm12b	91	81.977	Oryzias_latipes
ENSNGAG00000018480	Prdm12	99	72.051	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSNGAG00000018480	Prdm12	99	71.867	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSNGAG00000018480	Prdm12	94	80.692	ENSORLG00020019565	prdm12b	90	81.686	Oryzias_latipes_hni
ENSNGAG00000018480	Prdm12	99	72.051	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSNGAG00000018480	Prdm12	99	77.236	ENSORLG00015007621	prdm12b	91	81.739	Oryzias_latipes_hsok
ENSNGAG00000018480	Prdm12	99	76.676	ENSOMEG00000004134	prdm12b	91	81.556	Oryzias_melastigma
ENSNGAG00000018480	Prdm12	99	75.936	ENSOMEG00000007762	-	93	79.251	Oryzias_melastigma
ENSNGAG00000018480	Prdm12	94	98.485	ENSOGAG00000007557	PRDM12	99	98.485	Otolemur_garnettii
ENSNGAG00000018480	Prdm12	82	96.864	ENSPPAG00000031506	-	99	95.222	Pan_paniscus
ENSNGAG00000018480	Prdm12	100	84.958	ENSPPRG00000023024	PRDM12	84	89.329	Panthera_pardus
ENSNGAG00000018480	Prdm12	94	97.576	ENSPTRG00000043324	-	89	97.859	Pan_troglodytes
ENSNGAG00000018480	Prdm12	94	97.576	ENSPTRG00000021475	PRDM12	89	97.859	Pan_troglodytes
ENSNGAG00000018480	Prdm12	100	94.766	ENSPANG00000025967	PRDM12	100	94.766	Papio_anubis
ENSNGAG00000018480	Prdm12	99	80.376	ENSPKIG00000007228	prdm12b	90	86.269	Paramormyrops_kingsleyae
ENSNGAG00000018480	Prdm12	94	79.412	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSNGAG00000018480	Prdm12	100	88.827	ENSPSIG00000006739	PRDM12	92	93.272	Pelodiscus_sinensis
ENSNGAG00000018480	Prdm12	100	76.882	ENSPMGG00000008867	prdm12b	90	84.132	Periophthalmus_magnuspinnatus
ENSNGAG00000018480	Prdm12	99	73.107	ENSPMGG00000002356	-	86	81.269	Periophthalmus_magnuspinnatus
ENSNGAG00000018480	Prdm12	95	98.198	ENSPEMG00000009969	Prdm12	91	98.788	Peromyscus_maniculatus_bairdii
ENSNGAG00000018480	Prdm12	100	91.268	ENSPCIG00000024119	PRDM12	92	95.413	Phascolarctos_cinereus
ENSNGAG00000018480	Prdm12	99	78.591	ENSPFOG00000019841	prdm12b	91	83.036	Poecilia_formosa
ENSNGAG00000018480	Prdm12	93	83.036	ENSPLAG00000016626	prdm12b	88	83.735	Poecilia_latipinna
ENSNGAG00000018480	Prdm12	97	75.543	ENSPMEG00000016698	prdm12b	88	83.230	Poecilia_mexicana
ENSNGAG00000018480	Prdm12	93	82.891	ENSPREG00000015073	prdm12b	88	83.582	Poecilia_reticulata
ENSNGAG00000018480	Prdm12	95	76.385	ENSPREG00000003211	-	87	79.430	Poecilia_reticulata
ENSNGAG00000018480	Prdm12	97	94.269	ENSPPYG00000019694	PRDM12	93	97.859	Pongo_abelii
ENSNGAG00000018480	Prdm12	100	94.809	ENSPCOG00000022255	PRDM12	100	94.809	Propithecus_coquereli
ENSNGAG00000018480	Prdm12	100	94.536	ENSPVAG00000001511	PRDM12	100	94.536	Pteropus_vampyrus
ENSNGAG00000018480	Prdm12	99	76.064	ENSPNYG00000009607	prdm12b	90	81.176	Pundamilia_nyererei
ENSNGAG00000018480	Prdm12	99	72.727	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSNGAG00000018480	Prdm12	99	82.337	ENSPNAG00000024532	prdm12b	90	88.554	Pygocentrus_nattereri
ENSNGAG00000018480	Prdm12	99	73.656	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSNGAG00000018480	Prdm12	100	95.068	ENSRNOG00000009218	Prdm12	100	95.068	Rattus_norvegicus
ENSNGAG00000018480	Prdm12	90	97.792	ENSRBIG00000042712	PRDM12	88	96.885	Rhinopithecus_bieti
ENSNGAG00000018480	Prdm12	91	97.819	ENSRROG00000043554	PRDM12	100	97.819	Rhinopithecus_roxellana
ENSNGAG00000018480	Prdm12	100	90.449	ENSSHAG00000015972	PRDM12	92	94.512	Sarcophilus_harrisii
ENSNGAG00000018480	Prdm12	99	73.522	ENSSMAG00000003754	prdm12b	89	80.980	Scophthalmus_maximus
ENSNGAG00000018480	Prdm12	96	81.050	ENSSDUG00000019071	-	90	84.568	Seriola_dumerili
ENSNGAG00000018480	Prdm12	99	75.781	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSNGAG00000018480	Prdm12	99	80.170	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSNGAG00000018480	Prdm12	99	76.115	ENSSLDG00000009557	prdm12b	90	81.633	Seriola_lalandi_dorsalis
ENSNGAG00000018480	Prdm12	100	88.547	ENSSPUG00000013424	PRDM12	92	93.272	Sphenodon_punctatus
ENSNGAG00000018480	Prdm12	99	66.062	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSNGAG00000018480	Prdm12	99	75.591	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSNGAG00000018480	Prdm12	100	95.055	ENSSSCG00000005703	PRDM12	100	95.055	Sus_scrofa
ENSNGAG00000018480	Prdm12	99	77.716	ENSTRUG00000013239	-	93	81.325	Takifugu_rubripes
ENSNGAG00000018480	Prdm12	99	77.568	ENSTRUG00000018659	prdm12b	90	83.434	Takifugu_rubripes
ENSNGAG00000018480	Prdm12	99	77.628	ENSTNIG00000009020	prdm12b	89	84.084	Tetraodon_nigroviridis
ENSNGAG00000018480	Prdm12	99	77.933	ENSTNIG00000005859	-	92	80.909	Tetraodon_nigroviridis
ENSNGAG00000018480	Prdm12	94	98.485	ENSUAMG00000009653	PRDM12	91	98.471	Ursus_americanus
ENSNGAG00000018480	Prdm12	94	98.485	ENSVVUG00000027662	PRDM12	79	98.485	Vulpes_vulpes
ENSNGAG00000018480	Prdm12	93	82.738	ENSXCOG00000002836	prdm12b	89	83.434	Xiphophorus_couchianus
ENSNGAG00000018480	Prdm12	92	82.934	ENSXMAG00000005537	prdm12b	89	82.934	Xiphophorus_maculatus
ENSNGAG00000018480	Prdm12	99	73.698	ENSXMAG00000028012	-	87	80.952	Xiphophorus_maculatus