EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000018628 (Gene tree)
Gene ID: 103735116
Gene Symbol: Cnot1
Alias: 6030411K04Rik
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 86543 bases
Position: chrKL201026.1:204382-290924
Accession: 103735116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000018578	Not1	PF04054.15	9e-153	1	1
ENSNGAP00000018586	Not1	PF04054.15	1.3e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000024230	-	7710	XM_008834236	ENSNGAP00000018578	2376 (aa)	XP_008832458	UPI0004ED4A87
ENSNGAT00000024238	-	6981	-	ENSNGAP00000018586	2326 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000018628's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000018628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000018628	Cnot1	100	99.621	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSNGAG00000018628	Cnot1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSNGAG00000018628	Cnot1	100	99.453	ENSAMEG00000017298	CNOT1	100	99.453	Ailuropoda_melanoleuca
ENSNGAG00000018628	Cnot1	90	89.795	ENSACIG00000016003	cnot1	100	90.121	Amphilophus_citrinellus
ENSNGAG00000018628	Cnot1	100	90.386	ENSAPEG00000022342	cnot1	100	90.344	Amphiprion_percula
ENSNGAG00000018628	Cnot1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSNGAG00000018628	Cnot1	100	97.689	ENSAPLG00000007162	CNOT1	100	97.689	Anas_platyrhynchos
ENSNGAG00000018628	Cnot1	92	95.965	ENSACAG00000001602	CNOT1	98	96.197	Anolis_carolinensis
ENSNGAG00000018628	Cnot1	100	98.237	ENSANAG00000038198	CNOT1	100	98.237	Aotus_nancymaae
ENSNGAG00000018628	Cnot1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSNGAG00000018628	Cnot1	100	90.829	ENSAMXG00000013170	cnot1	100	91.337	Astyanax_mexicanus
ENSNGAG00000018628	Cnot1	100	99.705	ENSBTAG00000020782	CNOT1	100	99.705	Bos_taurus
ENSNGAG00000018628	Cnot1	81	40.440	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSNGAG00000018628	Cnot1	100	99.579	ENSCJAG00000011318	CNOT1	100	99.579	Callithrix_jacchus
ENSNGAG00000018628	Cnot1	100	99.370	ENSCAFG00000008426	CNOT1	100	99.370	Canis_familiaris
ENSNGAG00000018628	Cnot1	100	99.656	ENSCAFG00020010156	CNOT1	100	99.656	Canis_lupus_dingo
ENSNGAG00000018628	Cnot1	100	99.705	ENSCHIG00000010452	CNOT1	100	99.705	Capra_hircus
ENSNGAG00000018628	Cnot1	100	99.747	ENSTSYG00000006888	CNOT1	100	99.747	Carlito_syrichta
ENSNGAG00000018628	Cnot1	100	95.076	ENSCPOG00000013026	CNOT1	100	95.076	Cavia_porcellus
ENSNGAG00000018628	Cnot1	100	98.022	ENSCCAG00000026333	CNOT1	100	98.022	Cebus_capucinus
ENSNGAG00000018628	Cnot1	100	99.663	ENSCATG00000032625	CNOT1	100	99.663	Cercocebus_atys
ENSNGAG00000018628	Cnot1	100	99.790	ENSCLAG00000006289	CNOT1	100	99.790	Chinchilla_lanigera
ENSNGAG00000018628	Cnot1	100	99.663	ENSCSAG00000004731	CNOT1	100	99.663	Chlorocebus_sabaeus
ENSNGAG00000018628	Cnot1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSNGAG00000018628	Cnot1	98	95.837	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSNGAG00000018628	Cnot1	100	59.036	ENSCING00000009149	-	100	58.699	Ciona_intestinalis
ENSNGAG00000018628	Cnot1	89	63.020	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSNGAG00000018628	Cnot1	100	97.774	ENSCANG00000040534	CNOT1	100	97.774	Colobus_angolensis_palliatus
ENSNGAG00000018628	Cnot1	100	99.537	ENSCGRG00001016365	Cnot1	100	99.537	Cricetulus_griseus_chok1gshd
ENSNGAG00000018628	Cnot1	100	99.537	ENSCGRG00000001714	Cnot1	100	99.537	Cricetulus_griseus_crigri
ENSNGAG00000018628	Cnot1	100	82.986	ENSCVAG00000018930	cnot1	100	82.861	Cyprinodon_variegatus
ENSNGAG00000018628	Cnot1	100	89.774	ENSDARG00000004174	cnot1	100	89.690	Danio_rerio
ENSNGAG00000018628	Cnot1	100	97.139	ENSDNOG00000013250	CNOT1	100	97.139	Dasypus_novemcinctus
ENSNGAG00000018628	Cnot1	99	46.230	FBgn0085436	Not1	99	48.431	Drosophila_melanogaster
ENSNGAG00000018628	Cnot1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSNGAG00000018628	Cnot1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSNGAG00000018628	Cnot1	97	98.889	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSNGAG00000018628	Cnot1	100	99.747	ENSECAG00000009889	CNOT1	100	99.766	Equus_caballus
ENSNGAG00000018628	Cnot1	90	99.216	ENSEEUG00000006015	CNOT1	90	99.216	Erinaceus_europaeus
ENSNGAG00000018628	Cnot1	100	89.611	ENSELUG00000014085	cnot1	100	89.293	Esox_lucius
ENSNGAG00000018628	Cnot1	100	99.454	ENSFCAG00000025155	CNOT1	100	99.454	Felis_catus
ENSNGAG00000018628	Cnot1	100	97.727	ENSFALG00000007285	CNOT1	100	97.727	Ficedula_albicollis
ENSNGAG00000018628	Cnot1	100	99.705	ENSFDAG00000013399	CNOT1	100	99.705	Fukomys_damarensis
ENSNGAG00000018628	Cnot1	100	90.214	ENSFHEG00000020574	cnot1	100	90.214	Fundulus_heteroclitus
ENSNGAG00000018628	Cnot1	92	89.471	ENSGMOG00000012864	cnot1	100	89.842	Gadus_morhua
ENSNGAG00000018628	Cnot1	100	97.769	ENSGALG00000002301	CNOT1	100	97.769	Gallus_gallus
ENSNGAG00000018628	Cnot1	100	89.085	ENSGAFG00000015005	cnot1	100	89.043	Gambusia_affinis
ENSNGAG00000018628	Cnot1	92	90.264	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSNGAG00000018628	Cnot1	100	97.812	ENSGAGG00000022646	CNOT1	100	97.812	Gopherus_agassizii
ENSNGAG00000018628	Cnot1	100	99.579	ENSGGOG00000009547	CNOT1	100	99.579	Gorilla_gorilla
ENSNGAG00000018628	Cnot1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSNGAG00000018628	Cnot1	100	99.621	ENSHGLG00000014322	CNOT1	100	99.621	Heterocephalus_glaber_female
ENSNGAG00000018628	Cnot1	100	89.256	ENSHCOG00000006501	cnot1	100	89.395	Hippocampus_comes
ENSNGAG00000018628	Cnot1	100	88.758	ENSIPUG00000011915	cnot1	100	89.220	Ictalurus_punctatus
ENSNGAG00000018628	Cnot1	100	99.705	ENSSTOG00000005490	CNOT1	100	99.705	Ictidomys_tridecemlineatus
ENSNGAG00000018628	Cnot1	100	99.183	ENSJJAG00000000633	Cnot1	100	99.183	Jaculus_jaculus
ENSNGAG00000018628	Cnot1	100	90.088	ENSKMAG00000006149	cnot1	100	89.967	Kryptolebias_marmoratus
ENSNGAG00000018628	Cnot1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSNGAG00000018628	Cnot1	100	94.992	ENSLACG00000010869	CNOT1	100	94.992	Latimeria_chalumnae
ENSNGAG00000018628	Cnot1	100	92.869	ENSLOCG00000006324	cnot1	100	92.869	Lepisosteus_oculatus
ENSNGAG00000018628	Cnot1	100	99.495	ENSLAFG00000000098	CNOT1	100	99.495	Loxodonta_africana
ENSNGAG00000018628	Cnot1	100	99.656	ENSMFAG00000035888	CNOT1	100	99.656	Macaca_fascicularis
ENSNGAG00000018628	Cnot1	100	99.621	ENSMMUG00000014625	CNOT1	100	99.621	Macaca_mulatta
ENSNGAG00000018628	Cnot1	100	97.077	ENSMNEG00000031820	CNOT1	100	99.720	Macaca_nemestrina
ENSNGAG00000018628	Cnot1	100	98.452	ENSMLEG00000040933	CNOT1	100	98.452	Mandrillus_leucophaeus
ENSNGAG00000018628	Cnot1	100	89.089	ENSMAMG00000016524	cnot1	100	89.169	Mastacembelus_armatus
ENSNGAG00000018628	Cnot1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSNGAG00000018628	Cnot1	100	97.517	ENSMGAG00000001908	CNOT1	100	97.517	Meleagris_gallopavo
ENSNGAG00000018628	Cnot1	100	99.537	ENSMICG00000007071	CNOT1	100	99.537	Microcebus_murinus
ENSNGAG00000018628	Cnot1	100	99.579	ENSMOCG00000017969	Cnot1	100	99.579	Microtus_ochrogaster
ENSNGAG00000018628	Cnot1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSNGAG00000018628	Cnot1	100	97.897	ENSMODG00000014199	CNOT1	100	97.897	Monodelphis_domestica
ENSNGAG00000018628	Cnot1	100	90.130	ENSMALG00000008645	cnot1	100	90.172	Monopterus_albus
ENSNGAG00000018628	Cnot1	95	99.889	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSNGAG00000018628	Cnot1	100	99.621	ENSMUSG00000036550	Cnot1	100	99.621	Mus_musculus
ENSNGAG00000018628	Cnot1	100	99.579	MGP_PahariEiJ_G0023028	Cnot1	100	99.579	Mus_pahari
ENSNGAG00000018628	Cnot1	100	99.621	MGP_SPRETEiJ_G0032549	Cnot1	100	99.621	Mus_spretus
ENSNGAG00000018628	Cnot1	100	99.747	ENSMPUG00000004830	CNOT1	100	99.747	Mustela_putorius_furo
ENSNGAG00000018628	Cnot1	100	99.074	ENSMLUG00000003728	CNOT1	100	99.074	Myotis_lucifugus
ENSNGAG00000018628	Cnot1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSNGAG00000018628	Cnot1	100	99.570	ENSNLEG00000003566	CNOT1	100	99.570	Nomascus_leucogenys
ENSNGAG00000018628	Cnot1	86	98.210	ENSMEUG00000006145	CNOT1	87	98.210	Notamacropus_eugenii
ENSNGAG00000018628	Cnot1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSNGAG00000018628	Cnot1	100	99.663	ENSODEG00000016337	CNOT1	100	99.663	Octodon_degus
ENSNGAG00000018628	Cnot1	100	90.452	ENSONIG00000007358	cnot1	100	90.046	Oreochromis_niloticus
ENSNGAG00000018628	Cnot1	92	98.229	ENSOANG00000012109	CNOT1	100	98.307	Ornithorhynchus_anatinus
ENSNGAG00000018628	Cnot1	100	99.663	ENSOCUG00000006911	CNOT1	100	99.663	Oryctolagus_cuniculus
ENSNGAG00000018628	Cnot1	100	90.189	ENSORLG00000013734	cnot1	100	90.227	Oryzias_latipes
ENSNGAG00000018628	Cnot1	100	90.648	ENSORLG00020017012	cnot1	100	90.317	Oryzias_latipes_hni
ENSNGAG00000018628	Cnot1	100	90.562	ENSORLG00015007091	cnot1	100	90.060	Oryzias_latipes_hsok
ENSNGAG00000018628	Cnot1	100	89.884	ENSOMEG00000015124	cnot1	100	90.180	Oryzias_melastigma
ENSNGAG00000018628	Cnot1	100	99.579	ENSOGAG00000000543	CNOT1	100	99.579	Otolemur_garnettii
ENSNGAG00000018628	Cnot1	100	99.705	ENSOARG00000001567	CNOT1	100	99.705	Ovis_aries
ENSNGAG00000018628	Cnot1	100	99.621	ENSPPAG00000022013	CNOT1	100	99.621	Pan_paniscus
ENSNGAG00000018628	Cnot1	100	99.747	ENSPPRG00000004867	CNOT1	100	99.747	Panthera_pardus
ENSNGAG00000018628	Cnot1	100	99.747	ENSPTIG00000012589	CNOT1	100	99.747	Panthera_tigris_altaica
ENSNGAG00000018628	Cnot1	100	99.613	ENSPTRG00000008183	CNOT1	100	99.613	Pan_troglodytes
ENSNGAG00000018628	Cnot1	100	96.186	ENSPANG00000020901	CNOT1	100	96.186	Papio_anubis
ENSNGAG00000018628	Cnot1	100	92.069	ENSPKIG00000023538	CNOT1	100	92.237	Paramormyrops_kingsleyae
ENSNGAG00000018628	Cnot1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSNGAG00000018628	Cnot1	100	97.685	ENSPSIG00000005499	CNOT1	100	97.685	Pelodiscus_sinensis
ENSNGAG00000018628	Cnot1	100	81.040	ENSPMAG00000009381	cnot1	100	80.940	Petromyzon_marinus
ENSNGAG00000018628	Cnot1	100	97.809	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSNGAG00000018628	Cnot1	99	89.728	ENSPFOG00000003497	cnot1	100	89.725	Poecilia_formosa
ENSNGAG00000018628	Cnot1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSNGAG00000018628	Cnot1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSNGAG00000018628	Cnot1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSNGAG00000018628	Cnot1	100	99.579	ENSPPYG00000007410	CNOT1	100	99.579	Pongo_abelii
ENSNGAG00000018628	Cnot1	90	97.359	ENSPCAG00000003241	CNOT1	90	97.359	Procavia_capensis
ENSNGAG00000018628	Cnot1	100	99.570	ENSPCOG00000027139	CNOT1	100	99.570	Propithecus_coquereli
ENSNGAG00000018628	Cnot1	100	97.096	ENSPVAG00000004243	CNOT1	100	97.096	Pteropus_vampyrus
ENSNGAG00000018628	Cnot1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSNGAG00000018628	Cnot1	100	89.777	ENSPNAG00000000246	cnot1	100	90.198	Pygocentrus_nattereri
ENSNGAG00000018628	Cnot1	100	99.537	ENSRNOG00000012271	Cnot1	100	99.537	Rattus_norvegicus
ENSNGAG00000018628	Cnot1	100	97.549	ENSRBIG00000044598	CNOT1	100	97.549	Rhinopithecus_bieti
ENSNGAG00000018628	Cnot1	100	99.663	ENSRROG00000000906	CNOT1	100	99.663	Rhinopithecus_roxellana
ENSNGAG00000018628	Cnot1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSNGAG00000018628	Cnot1	100	95.369	ENSSBOG00000029155	CNOT1	100	95.369	Saimiri_boliviensis_boliviensis
ENSNGAG00000018628	Cnot1	100	98.066	ENSSHAG00000012187	CNOT1	100	98.066	Sarcophilus_harrisii
ENSNGAG00000018628	Cnot1	100	92.463	ENSSFOG00015017614	cnot1	100	92.202	Scleropages_formosus
ENSNGAG00000018628	Cnot1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSNGAG00000018628	Cnot1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSNGAG00000018628	Cnot1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSNGAG00000018628	Cnot1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSNGAG00000018628	Cnot1	100	90.474	ENSSPAG00000018802	cnot1	100	90.264	Stegastes_partitus
ENSNGAG00000018628	Cnot1	100	99.579	ENSSSCG00000002799	CNOT1	100	99.579	Sus_scrofa
ENSNGAG00000018628	Cnot1	100	97.604	ENSTGUG00000005919	CNOT1	100	97.604	Taeniopygia_guttata
ENSNGAG00000018628	Cnot1	100	88.861	ENSTNIG00000018706	cnot1	100	88.708	Tetraodon_nigroviridis
ENSNGAG00000018628	Cnot1	80	99.366	ENSTBEG00000000720	CNOT1	80	99.366	Tupaia_belangeri
ENSNGAG00000018628	Cnot1	95	99.534	ENSTTRG00000008460	CNOT1	95	99.534	Tursiops_truncatus
ENSNGAG00000018628	Cnot1	100	99.747	ENSUAMG00000009251	CNOT1	100	99.747	Ursus_americanus
ENSNGAG00000018628	Cnot1	100	99.747	ENSUMAG00000021291	CNOT1	100	99.747	Ursus_maritimus
ENSNGAG00000018628	Cnot1	97	97.172	ENSVPAG00000008846	CNOT1	97	97.172	Vicugna_pacos
ENSNGAG00000018628	Cnot1	100	98.616	ENSVVUG00000024037	CNOT1	100	99.259	Vulpes_vulpes
ENSNGAG00000018628	Cnot1	100	90.176	ENSXETG00000015900	cnot1	100	89.966	Xenopus_tropicalis
ENSNGAG00000018628	Cnot1	100	89.253	ENSXCOG00000013552	cnot1	100	89.211	Xiphophorus_couchianus
ENSNGAG00000018628	Cnot1	100	89.295	ENSXMAG00000006031	cnot1	100	89.253	Xiphophorus_maculatus