EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000018682 (Gene tree)
Gene ID: 103731767
Gene Symbol: Trub1
Alias: 2610009I02Rik|9030425C13Rik
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 57983 bases
Position: chrKL200154.1:3640950-3698932
Accession: 103731767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000018596	TruB_N	PF01509.18	1.5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000024248	-	2827	XM_008830239	ENSNGAP00000018596	348 (aa)	XP_008828461	UPI0004ED3EC2

Gene Model

Click here to download ENSNGAG00000018682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000018682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000018682	Trub1	68	30.576	ENSNGAG00000018679	Trub2	84	30.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000018682	Trub1	99	86.533	ENSG00000165832	TRUB1	99	86.533	Homo_sapiens
ENSNGAG00000018682	Trub1	70	67.755	ENSAPOG00000020565	trub1	91	66.534	Acanthochromis_polyacanthus
ENSNGAG00000018682	Trub1	86	90.099	ENSAMEG00000014931	TRUB1	99	85.470	Ailuropoda_melanoleuca
ENSNGAG00000018682	Trub1	71	61.382	ENSACIG00000003060	trub1	82	61.382	Amphilophus_citrinellus
ENSNGAG00000018682	Trub1	70	67.755	ENSAOCG00000017188	trub1	89	67.480	Amphiprion_ocellaris
ENSNGAG00000018682	Trub1	71	67.073	ENSAPEG00000015209	trub1	89	67.073	Amphiprion_percula
ENSNGAG00000018682	Trub1	69	68.465	ENSATEG00000023291	trub1	86	68.465	Anabas_testudineus
ENSNGAG00000018682	Trub1	79	75.273	ENSAPLG00000006808	TRUB1	99	75.273	Anas_platyrhynchos
ENSNGAG00000018682	Trub1	76	70.833	ENSACAG00000009282	TRUB1	95	70.833	Anolis_carolinensis
ENSNGAG00000018682	Trub1	95	88.855	ENSANAG00000022870	TRUB1	99	86.246	Aotus_nancymaae
ENSNGAG00000018682	Trub1	72	66.270	ENSACLG00000000823	trub1	91	66.270	Astatotilapia_calliptera
ENSNGAG00000018682	Trub1	77	65.056	ENSAMXG00000015845	trub1	90	65.056	Astyanax_mexicanus
ENSNGAG00000018682	Trub1	97	88.427	ENSBTAG00000012955	TRUB1	100	86.080	Bos_taurus
ENSNGAG00000018682	Trub1	99	86.119	ENSCJAG00000047815	TRUB1	99	86.119	Callithrix_jacchus
ENSNGAG00000018682	Trub1	99	85.960	ENSCAFG00000011688	TRUB1	99	85.960	Canis_familiaris
ENSNGAG00000018682	Trub1	99	86.246	ENSCAFG00020013237	TRUB1	99	86.246	Canis_lupus_dingo
ENSNGAG00000018682	Trub1	87	91.060	ENSCHIG00000020884	TRUB1	100	85.470	Capra_hircus
ENSNGAG00000018682	Trub1	86	91.030	ENSTSYG00000000446	TRUB1	99	83.714	Carlito_syrichta
ENSNGAG00000018682	Trub1	73	81.028	ENSCAPG00000017088	TRUB1	99	81.028	Cavia_aperea
ENSNGAG00000018682	Trub1	67	81.197	ENSCPOG00000030129	-	76	91.795	Cavia_porcellus
ENSNGAG00000018682	Trub1	70	83.607	ENSCPOG00000040236	-	100	83.607	Cavia_porcellus
ENSNGAG00000018682	Trub1	97	88.095	ENSCCAG00000028842	TRUB1	99	86.000	Cebus_capucinus
ENSNGAG00000018682	Trub1	99	85.673	ENSCATG00000033431	TRUB1	99	85.673	Cercocebus_atys
ENSNGAG00000018682	Trub1	70	84.426	ENSCLAG00000008664	TRUB1	100	84.426	Chinchilla_lanigera
ENSNGAG00000018682	Trub1	99	85.673	ENSCSAG00000004891	TRUB1	99	85.673	Chlorocebus_sabaeus
ENSNGAG00000018682	Trub1	99	73.988	ENSCHOG00000011931	TRUB1	99	73.988	Choloepus_hoffmanni
ENSNGAG00000018682	Trub1	78	77.574	ENSCPBG00000003051	TRUB1	94	77.574	Chrysemys_picta_bellii
ENSNGAG00000018682	Trub1	99	85.673	ENSCANG00000029445	TRUB1	99	85.673	Colobus_angolensis_palliatus
ENSNGAG00000018682	Trub1	73	88.627	ENSCGRG00001016772	-	100	72.989	Cricetulus_griseus_chok1gshd
ENSNGAG00000018682	Trub1	81	79.715	ENSCGRG00001010322	-	86	71.839	Cricetulus_griseus_chok1gshd
ENSNGAG00000018682	Trub1	81	89.680	ENSCGRG00000010806	Trub1	100	80.460	Cricetulus_griseus_crigri
ENSNGAG00000018682	Trub1	74	62.109	ENSCSEG00000011261	trub1	97	56.478	Cynoglossus_semilaevis
ENSNGAG00000018682	Trub1	70	67.755	ENSCVAG00000008791	trub1	84	62.816	Cyprinodon_variegatus
ENSNGAG00000018682	Trub1	74	66.795	ENSDARG00000053805	trub1	89	66.795	Danio_rerio
ENSNGAG00000018682	Trub1	97	82.891	ENSDNOG00000001069	TRUB1	100	81.481	Dasypus_novemcinctus
ENSNGAG00000018682	Trub1	97	86.053	ENSDORG00000010431	Trub1	87	91.060	Dipodomys_ordii
ENSNGAG00000018682	Trub1	65	87.324	ENSETEG00000009183	TRUB1	81	73.529	Echinops_telfairi
ENSNGAG00000018682	Trub1	97	89.318	ENSEASG00005014739	TRUB1	100	87.714	Equus_asinus_asinus
ENSNGAG00000018682	Trub1	97	89.318	ENSECAG00000007177	TRUB1	100	87.714	Equus_caballus
ENSNGAG00000018682	Trub1	84	79.252	ENSEEUG00000013993	TRUB1	84	79.000	Erinaceus_europaeus
ENSNGAG00000018682	Trub1	70	68.571	ENSELUG00000000502	trub1	86	68.571	Esox_lucius
ENSNGAG00000018682	Trub1	86	92.667	ENSFCAG00000031927	TRUB1	99	87.608	Felis_catus
ENSNGAG00000018682	Trub1	69	76.667	ENSFALG00000002232	TRUB1	92	76.667	Ficedula_albicollis
ENSNGAG00000018682	Trub1	69	85.477	ENSFDAG00000008140	TRUB1	99	85.477	Fukomys_damarensis
ENSNGAG00000018682	Trub1	70	67.347	ENSFHEG00000004016	trub1	84	67.347	Fundulus_heteroclitus
ENSNGAG00000018682	Trub1	78	73.897	ENSGALG00000009091	TRUB1	96	73.897	Gallus_gallus
ENSNGAG00000018682	Trub1	68	65.272	ENSGAFG00000009193	trub1	86	64.344	Gambusia_affinis
ENSNGAG00000018682	Trub1	57	66.834	ENSGACG00000015387	trub1	96	67.692	Gasterosteus_aculeatus
ENSNGAG00000018682	Trub1	89	71.845	ENSGAGG00000009758	TRUB1	81	76.056	Gopherus_agassizii
ENSNGAG00000018682	Trub1	99	85.960	ENSGGOG00000004583	TRUB1	99	85.960	Gorilla_gorilla
ENSNGAG00000018682	Trub1	72	66.270	ENSHBUG00000016787	trub1	91	66.270	Haplochromis_burtoni
ENSNGAG00000018682	Trub1	100	83.668	ENSHGLG00000015314	TRUB1	100	83.668	Heterocephalus_glaber_female
ENSNGAG00000018682	Trub1	70	84.426	ENSHGLG00100009183	TRUB1	100	84.426	Heterocephalus_glaber_male
ENSNGAG00000018682	Trub1	73	65.234	ENSHCOG00000017877	trub1	93	65.234	Hippocampus_comes
ENSNGAG00000018682	Trub1	79	64.130	ENSIPUG00000017559	trub1	97	64.130	Ictalurus_punctatus
ENSNGAG00000018682	Trub1	87	89.404	ENSSTOG00000003641	TRUB1	100	81.375	Ictidomys_tridecemlineatus
ENSNGAG00000018682	Trub1	86	89.000	ENSJJAG00000011800	Trub1	100	81.034	Jaculus_jaculus
ENSNGAG00000018682	Trub1	73	65.370	ENSKMAG00000006232	trub1	92	65.370	Kryptolebias_marmoratus
ENSNGAG00000018682	Trub1	76	64.286	ENSLBEG00000026722	trub1	92	64.286	Labrus_bergylta
ENSNGAG00000018682	Trub1	79	73.285	ENSLACG00000014885	TRUB1	92	73.285	Latimeria_chalumnae
ENSNGAG00000018682	Trub1	78	69.597	ENSLOCG00000012979	trub1	93	69.597	Lepisosteus_oculatus
ENSNGAG00000018682	Trub1	84	81.333	ENSLAFG00000015452	TRUB1	99	75.070	Loxodonta_africana
ENSNGAG00000018682	Trub1	99	85.960	ENSMFAG00000031767	TRUB1	99	85.960	Macaca_fascicularis
ENSNGAG00000018682	Trub1	99	85.673	ENSMMUG00000001902	TRUB1	99	85.673	Macaca_mulatta
ENSNGAG00000018682	Trub1	99	81.375	ENSMNEG00000044646	TRUB1	99	81.375	Macaca_nemestrina
ENSNGAG00000018682	Trub1	99	85.673	ENSMLEG00000042655	TRUB1	99	85.673	Mandrillus_leucophaeus
ENSNGAG00000018682	Trub1	72	66.270	ENSMZEG00005024095	trub1	91	66.270	Maylandia_zebra
ENSNGAG00000018682	Trub1	78	73.162	ENSMGAG00000011135	TRUB1	93	73.162	Meleagris_gallopavo
ENSNGAG00000018682	Trub1	86	86.622	ENSMAUG00000011101	Trub1	100	80.747	Mesocricetus_auratus
ENSNGAG00000018682	Trub1	100	86.533	ENSMICG00000016324	TRUB1	100	86.533	Microcebus_murinus
ENSNGAG00000018682	Trub1	100	79.885	ENSMOCG00000017759	Trub1	100	79.885	Microtus_ochrogaster
ENSNGAG00000018682	Trub1	78	83.704	ENSMODG00000009676	TRUB1	77	81.786	Monodelphis_domestica
ENSNGAG00000018682	Trub1	100	80.460	MGP_CAROLIEiJ_G0023100	Trub1	100	80.747	Mus_caroli
ENSNGAG00000018682	Trub1	100	79.310	ENSMUSG00000025086	Trub1	100	79.598	Mus_musculus
ENSNGAG00000018682	Trub1	100	79.885	MGP_PahariEiJ_G0014588	Trub1	100	80.172	Mus_pahari
ENSNGAG00000018682	Trub1	100	79.598	MGP_SPRETEiJ_G0024021	Trub1	100	79.885	Mus_spretus
ENSNGAG00000018682	Trub1	86	92.027	ENSMPUG00000003556	TRUB1	99	86.246	Mustela_putorius_furo
ENSNGAG00000018682	Trub1	96	84.685	ENSMLUG00000017686	TRUB1	99	82.000	Myotis_lucifugus
ENSNGAG00000018682	Trub1	71	67.480	ENSNBRG00000023393	trub1	88	67.480	Neolamprologus_brichardi
ENSNGAG00000018682	Trub1	97	87.202	ENSNLEG00000016345	TRUB1	99	85.673	Nomascus_leucogenys
ENSNGAG00000018682	Trub1	58	89.055	ENSMEUG00000006603	TRUB1	78	86.256	Notamacropus_eugenii
ENSNGAG00000018682	Trub1	87	82.781	ENSOPRG00000009371	TRUB1	88	82.781	Ochotona_princeps
ENSNGAG00000018682	Trub1	100	79.083	ENSODEG00000010854	TRUB1	100	79.083	Octodon_degus
ENSNGAG00000018682	Trub1	74	64.479	ENSONIG00000007249	trub1	94	64.479	Oreochromis_niloticus
ENSNGAG00000018682	Trub1	79	79.927	ENSOANG00000001556	TRUB1	93	77.739	Ornithorhynchus_anatinus
ENSNGAG00000018682	Trub1	100	81.322	ENSOCUG00000009456	TRUB1	100	81.322	Oryctolagus_cuniculus
ENSNGAG00000018682	Trub1	69	68.880	ENSORLG00000029719	trub1	86	68.880	Oryzias_latipes
ENSNGAG00000018682	Trub1	69	68.465	ENSORLG00020016767	trub1	85	68.465	Oryzias_latipes_hni
ENSNGAG00000018682	Trub1	69	68.465	ENSORLG00015014728	trub1	86	68.465	Oryzias_latipes_hsok
ENSNGAG00000018682	Trub1	74	67.568	ENSOMEG00000014556	trub1	90	67.704	Oryzias_melastigma
ENSNGAG00000018682	Trub1	97	89.645	ENSOGAG00000015895	TRUB1	100	88.000	Otolemur_garnettii
ENSNGAG00000018682	Trub1	85	88.449	ENSOARG00000015591	TRUB1	100	81.793	Ovis_aries
ENSNGAG00000018682	Trub1	99	86.533	ENSPPAG00000043645	TRUB1	99	86.533	Pan_paniscus
ENSNGAG00000018682	Trub1	86	92.667	ENSPPRG00000007096	TRUB1	99	87.320	Panthera_pardus
ENSNGAG00000018682	Trub1	86	92.333	ENSPTIG00000006378	TRUB1	99	87.032	Panthera_tigris_altaica
ENSNGAG00000018682	Trub1	99	86.533	ENSPTRG00000002964	TRUB1	99	86.533	Pan_troglodytes
ENSNGAG00000018682	Trub1	99	85.387	ENSPANG00000020712	TRUB1	99	85.387	Papio_anubis
ENSNGAG00000018682	Trub1	78	75.000	ENSPSIG00000012877	TRUB1	93	75.000	Pelodiscus_sinensis
ENSNGAG00000018682	Trub1	70	65.714	ENSPMGG00000000075	trub1	88	65.714	Periophthalmus_magnuspinnatus
ENSNGAG00000018682	Trub1	100	78.736	ENSPEMG00000011156	Trub1	100	78.736	Peromyscus_maniculatus_bairdii
ENSNGAG00000018682	Trub1	82	79.371	ENSPCIG00000009729	TRUB1	79	78.425	Phascolarctos_cinereus
ENSNGAG00000018682	Trub1	70	65.714	ENSPFOG00000009950	trub1	90	65.714	Poecilia_formosa
ENSNGAG00000018682	Trub1	70	65.306	ENSPLAG00000013855	trub1	86	65.306	Poecilia_latipinna
ENSNGAG00000018682	Trub1	70	65.714	ENSPMEG00000009064	trub1	88	65.714	Poecilia_mexicana
ENSNGAG00000018682	Trub1	70	66.531	ENSPREG00000003343	trub1	88	66.531	Poecilia_reticulata
ENSNGAG00000018682	Trub1	97	87.500	ENSPPYG00000002676	TRUB1	99	85.960	Pongo_abelii
ENSNGAG00000018682	Trub1	99	72.159	ENSPCAG00000008427	TRUB1	99	72.159	Procavia_capensis
ENSNGAG00000018682	Trub1	100	81.429	ENSPCOG00000024360	TRUB1	100	81.429	Propithecus_coquereli
ENSNGAG00000018682	Trub1	75	86.312	ENSPVAG00000007575	TRUB1	100	86.312	Pteropus_vampyrus
ENSNGAG00000018682	Trub1	72	66.270	ENSPNYG00000018614	trub1	91	66.270	Pundamilia_nyererei
ENSNGAG00000018682	Trub1	84	55.254	ENSPNAG00000006881	trub1	97	55.254	Pygocentrus_nattereri
ENSNGAG00000018682	Trub1	100	80.747	ENSRNOG00000017321	Trub1	100	80.460	Rattus_norvegicus
ENSNGAG00000018682	Trub1	99	75.931	ENSRBIG00000033423	TRUB1	99	75.931	Rhinopithecus_bieti
ENSNGAG00000018682	Trub1	99	85.387	ENSRROG00000033902	TRUB1	99	85.387	Rhinopithecus_roxellana
ENSNGAG00000018682	Trub1	97	87.798	ENSSBOG00000024237	TRUB1	99	85.269	Saimiri_boliviensis_boliviensis
ENSNGAG00000018682	Trub1	73	77.734	ENSSHAG00000009346	TRUB1	86	77.734	Sarcophilus_harrisii
ENSNGAG00000018682	Trub1	70	69.959	ENSSFOG00015022124	trub1	83	69.959	Scleropages_formosus
ENSNGAG00000018682	Trub1	71	67.480	ENSSMAG00000001020	trub1	88	67.480	Scophthalmus_maximus
ENSNGAG00000018682	Trub1	69	68.333	ENSSDUG00000016414	trub1	88	68.293	Seriola_dumerili
ENSNGAG00000018682	Trub1	69	68.750	ENSSLDG00000015486	trub1	88	68.699	Seriola_lalandi_dorsalis
ENSNGAG00000018682	Trub1	86	72.819	ENSSPUG00000001642	TRUB1	96	75.714	Sphenodon_punctatus
ENSNGAG00000018682	Trub1	75	66.031	ENSSPAG00000001217	trub1	93	66.031	Stegastes_partitus
ENSNGAG00000018682	Trub1	100	82.286	ENSSSCG00000010653	TRUB1	100	82.286	Sus_scrofa
ENSNGAG00000018682	Trub1	78	76.667	ENSTGUG00000010971	TRUB1	97	76.471	Taeniopygia_guttata
ENSNGAG00000018682	Trub1	73	75.889	ENSTBEG00000002880	TRUB1	99	75.889	Tupaia_belangeri
ENSNGAG00000018682	Trub1	62	93.519	ENSTTRG00000005767	TRUB1	100	84.091	Tursiops_truncatus
ENSNGAG00000018682	Trub1	86	92.359	ENSUAMG00000024876	TRUB1	99	86.819	Ursus_americanus
ENSNGAG00000018682	Trub1	85	91.864	ENSUMAG00000002411	TRUB1	99	82.521	Ursus_maritimus
ENSNGAG00000018682	Trub1	100	85.429	ENSVPAG00000005507	TRUB1	100	85.429	Vicugna_pacos
ENSNGAG00000018682	Trub1	85	91.582	ENSVVUG00000010085	TRUB1	83	84.814	Vulpes_vulpes
ENSNGAG00000018682	Trub1	78	66.176	ENSXETG00000023828	trub1	98	66.176	Xenopus_tropicalis
ENSNGAG00000018682	Trub1	70	64.198	ENSXCOG00000017847	trub1	86	64.198	Xiphophorus_couchianus
ENSNGAG00000018682	Trub1	70	64.898	ENSXMAG00000014701	trub1	88	64.898	Xiphophorus_maculatus