EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000019075 (Gene tree)
Gene ID: 103746874
Gene Symbol: Hnrnpu
Alias: Hnrpu|Sp120|scaffold attachment factor A
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 9483 bases
Position: chrKL203744.1:1928408-1937890
Accession: 103746874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000019175	SAP	PF02037.27	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000024835	-	3670	XM_008849154	ENSNGAP00000019175	797 (aa)	XP_008847376	UPI0004ED0570

Gene Model

Click here to download ENSNGAG00000019075's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000019075	Hnrnpu	64	49.159	ENSNGAG00000012005	Hnrnpul2	67	50.992
ENSNGAG00000019075	Hnrnpu	82	47.786	ENSNGAG00000017197	Hnrnpul1	60	52.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019075	Hnrnpu	100	96.774	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSNGAG00000019075	Hnrnpu	75	56.822	ENSAPOG00000017400	hnrnpub	81	59.133	Acanthochromis_polyacanthus
ENSNGAG00000019075	Hnrnpu	100	92.692	ENSAMEG00000009145	HNRNPU	100	92.814	Ailuropoda_melanoleuca
ENSNGAG00000019075	Hnrnpu	99	50.549	ENSACIG00000012138	hnrnpub	88	80.851	Amphilophus_citrinellus
ENSNGAG00000019075	Hnrnpu	99	48.951	ENSAOCG00000015843	hnrnpub	99	52.852	Amphiprion_ocellaris
ENSNGAG00000019075	Hnrnpu	99	48.951	ENSAPEG00000014679	hnrnpub	99	52.852	Amphiprion_percula
ENSNGAG00000019075	Hnrnpu	94	55.145	ENSATEG00000016178	hnrnpub	92	53.366	Anabas_testudineus
ENSNGAG00000019075	Hnrnpu	80	83.433	ENSACAG00000004511	HNRNPU	71	89.667	Anolis_carolinensis
ENSNGAG00000019075	Hnrnpu	100	96.650	ENSANAG00000033895	-	100	96.650	Aotus_nancymaae
ENSNGAG00000019075	Hnrnpu	73	59.967	ENSACLG00000008165	hnrnpub	80	55.927	Astatotilapia_calliptera
ENSNGAG00000019075	Hnrnpu	98	96.831	ENSBTAG00000007606	HNRNPU	98	96.831	Bos_taurus
ENSNGAG00000019075	Hnrnpu	100	94.182	ENSCJAG00000016914	HNRNPU	100	94.182	Callithrix_jacchus
ENSNGAG00000019075	Hnrnpu	100	96.898	ENSCAFG00020000918	HNRNPU	100	96.898	Canis_lupus_dingo
ENSNGAG00000019075	Hnrnpu	100	96.898	ENSCHIG00000004900	HNRNPU	100	96.898	Capra_hircus
ENSNGAG00000019075	Hnrnpu	100	95.255	ENSCPOG00000011887	HNRNPU	100	95.255	Cavia_porcellus
ENSNGAG00000019075	Hnrnpu	100	96.380	ENSCCAG00000037859	-	100	96.380	Cebus_capucinus
ENSNGAG00000019075	Hnrnpu	100	96.504	ENSCATG00000035273	HNRNPU	100	96.504	Cercocebus_atys
ENSNGAG00000019075	Hnrnpu	100	95.255	ENSCLAG00000007100	HNRNPU	100	95.255	Chinchilla_lanigera
ENSNGAG00000019075	Hnrnpu	100	96.402	ENSCSAG00000009219	HNRNPU	100	96.402	Chlorocebus_sabaeus
ENSNGAG00000019075	Hnrnpu	81	93.333	ENSCHOG00000001387	HNRNPU	79	93.333	Choloepus_hoffmanni
ENSNGAG00000019075	Hnrnpu	100	78.069	ENSCPBG00000009415	HNRNPU	98	80.702	Chrysemys_picta_bellii
ENSNGAG00000019075	Hnrnpu	100	94.007	ENSCANG00000022780	HNRNPU	100	93.258	Colobus_angolensis_palliatus
ENSNGAG00000019075	Hnrnpu	100	97.997	ENSCGRG00001020525	Hnrnpu	100	97.997	Cricetulus_griseus_chok1gshd
ENSNGAG00000019075	Hnrnpu	69	78.261	ENSCSEG00000010804	hnrnpub	86	78.261	Cynoglossus_semilaevis
ENSNGAG00000019075	Hnrnpu	76	55.172	ENSCVAG00000004280	hnrnpub	74	71.429	Cyprinodon_variegatus
ENSNGAG00000019075	Hnrnpu	80	81.395	ENSDARG00000004735	hnrnpub	99	52.503	Danio_rerio
ENSNGAG00000019075	Hnrnpu	81	64.706	ENSDARG00000015206	hnrnpua	99	52.606	Danio_rerio
ENSNGAG00000019075	Hnrnpu	81	99.496	ENSDNOG00000000215	HNRNPU	88	99.496	Dasypus_novemcinctus
ENSNGAG00000019075	Hnrnpu	100	93.116	ENSDORG00000015491	Hnrnpu	100	93.367	Dipodomys_ordii
ENSNGAG00000019075	Hnrnpu	100	91.935	ENSETEG00000014565	HNRNPU	100	91.439	Echinops_telfairi
ENSNGAG00000019075	Hnrnpu	100	96.650	ENSEASG00005003017	HNRNPU	100	96.650	Equus_asinus_asinus
ENSNGAG00000019075	Hnrnpu	100	96.526	ENSECAG00000007955	HNRNPU	100	96.526	Equus_caballus
ENSNGAG00000019075	Hnrnpu	99	51.117	ENSELUG00000011966	hnrnpua	57	73.737	Esox_lucius
ENSNGAG00000019075	Hnrnpu	77	56.921	ENSELUG00000010733	hnrnpub	82	56.845	Esox_lucius
ENSNGAG00000019075	Hnrnpu	100	96.894	ENSFCAG00000002156	HNRNPU	99	98.684	Felis_catus
ENSNGAG00000019075	Hnrnpu	91	99.158	ENSFDAG00000006026	HNRNPU	100	99.158	Fukomys_damarensis
ENSNGAG00000019075	Hnrnpu	75	54.148	ENSFHEG00000022639	hnrnpub	81	52.312	Fundulus_heteroclitus
ENSNGAG00000019075	Hnrnpu	73	59.314	ENSGMOG00000001755	hnrnpub	77	60.956	Gadus_morhua
ENSNGAG00000019075	Hnrnpu	100	77.594	ENSGALG00000010671	HNRNPU	100	77.503	Gallus_gallus
ENSNGAG00000019075	Hnrnpu	59	64.043	ENSGAFG00000009369	hnrnpub	99	50.115	Gambusia_affinis
ENSNGAG00000019075	Hnrnpu	78	59.225	ENSGACG00000004679	hnrnpub	99	53.930	Gasterosteus_aculeatus
ENSNGAG00000019075	Hnrnpu	100	96.005	ENSGGOG00000004061	HNRNPU	100	95.381	Gorilla_gorilla
ENSNGAG00000019075	Hnrnpu	75	57.229	ENSHBUG00000012290	hnrnpub	80	56.231	Haplochromis_burtoni
ENSNGAG00000019075	Hnrnpu	100	97.136	ENSHGLG00000010594	-	100	97.136	Heterocephalus_glaber_female
ENSNGAG00000019075	Hnrnpu	83	99.496	ENSHGLG00100015093	HNRNPU	100	99.496	Heterocephalus_glaber_male
ENSNGAG00000019075	Hnrnpu	75	51.890	ENSHCOG00000020091	hnrnpub	78	54.058	Hippocampus_comes
ENSNGAG00000019075	Hnrnpu	73	83.721	ENSIPUG00000007749	hnrnpu	92	68.421	Ictalurus_punctatus
ENSNGAG00000019075	Hnrnpu	100	95.116	ENSJJAG00000011371	Hnrnpu	100	95.116	Jaculus_jaculus
ENSNGAG00000019075	Hnrnpu	76	54.853	ENSKMAG00000004532	hnrnpub	99	49.715	Kryptolebias_marmoratus
ENSNGAG00000019075	Hnrnpu	75	55.869	ENSLBEG00000022520	hnrnpub	99	51.740	Labrus_bergylta
ENSNGAG00000019075	Hnrnpu	99	62.454	ENSLACG00000017463	HNRNPU	99	62.687	Latimeria_chalumnae
ENSNGAG00000019075	Hnrnpu	77	68.289	ENSLOCG00000016652	hnrnpua	99	59.277	Lepisosteus_oculatus
ENSNGAG00000019075	Hnrnpu	100	95.506	ENSLAFG00000021377	HNRNPU	100	94.132	Loxodonta_africana
ENSNGAG00000019075	Hnrnpu	100	96.504	ENSMFAG00000037308	HNRNPU	100	96.504	Macaca_fascicularis
ENSNGAG00000019075	Hnrnpu	100	96.754	ENSMMUG00000021098	HNRNPU	100	96.754	Macaca_mulatta
ENSNGAG00000019075	Hnrnpu	100	96.504	ENSMNEG00000043645	HNRNPU	100	96.504	Macaca_nemestrina
ENSNGAG00000019075	Hnrnpu	75	57.612	ENSMAMG00000007196	hnrnpub	80	54.799	Mastacembelus_armatus
ENSNGAG00000019075	Hnrnpu	73	60.131	ENSMZEG00005003185	hnrnpub	80	56.079	Maylandia_zebra
ENSNGAG00000019075	Hnrnpu	100	97.500	ENSMAUG00000008842	Hnrnpu	100	97.500	Mesocricetus_auratus
ENSNGAG00000019075	Hnrnpu	100	96.504	ENSMICG00000004616	HNRNPU	100	96.504	Microcebus_murinus
ENSNGAG00000019075	Hnrnpu	100	97.747	ENSMOCG00000015623	Hnrnpu	100	97.747	Microtus_ochrogaster
ENSNGAG00000019075	Hnrnpu	100	88.118	ENSMODG00000006515	HNRNPU	100	88.471	Monodelphis_domestica
ENSNGAG00000019075	Hnrnpu	73	58.909	ENSMALG00000018243	hnrnpub	70	63.139	Monopterus_albus
ENSNGAG00000019075	Hnrnpu	100	97.628	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	97.628	Mus_caroli
ENSNGAG00000019075	Hnrnpu	100	97.753	ENSMUSG00000039630	Hnrnpu	100	97.753	Mus_musculus
ENSNGAG00000019075	Hnrnpu	100	97.007	MGP_PahariEiJ_G0028193	Hnrnpu	100	97.007	Mus_pahari
ENSNGAG00000019075	Hnrnpu	100	97.753	MGP_SPRETEiJ_G0015761	Hnrnpu	100	97.753	Mus_spretus
ENSNGAG00000019075	Hnrnpu	100	89.290	ENSMLUG00000000475	HNRNPU	100	89.788	Myotis_lucifugus
ENSNGAG00000019075	Hnrnpu	75	57.186	ENSNBRG00000017855	hnrnpub	80	56.079	Neolamprologus_brichardi
ENSNGAG00000019075	Hnrnpu	99	85.078	ENSMEUG00000000541	HNRNPU	100	85.870	Notamacropus_eugenii
ENSNGAG00000019075	Hnrnpu	69	99.029	ENSODEG00000014458	-	100	99.029	Octodon_degus
ENSNGAG00000019075	Hnrnpu	81	78.723	ENSONIG00000001260	hnrnpub	89	78.723	Oreochromis_niloticus
ENSNGAG00000019075	Hnrnpu	98	94.678	ENSOCUG00000014469	HNRNPU	93	94.678	Oryctolagus_cuniculus
ENSNGAG00000019075	Hnrnpu	81	83.721	ENSORLG00000016114	hnrnpub	99	49.376	Oryzias_latipes
ENSNGAG00000019075	Hnrnpu	81	83.721	ENSORLG00020005363	hnrnpub	99	49.318	Oryzias_latipes_hni
ENSNGAG00000019075	Hnrnpu	81	83.721	ENSORLG00015001190	hnrnpub	99	49.318	Oryzias_latipes_hsok
ENSNGAG00000019075	Hnrnpu	81	83.721	ENSOMEG00000014951	hnrnpub	86	83.721	Oryzias_melastigma
ENSNGAG00000019075	Hnrnpu	100	96.650	ENSOGAG00000014024	HNRNPU	100	96.650	Otolemur_garnettii
ENSNGAG00000019075	Hnrnpu	83	98.827	ENSOARG00000004985	HNRNPU	90	98.822	Ovis_aries
ENSNGAG00000019075	Hnrnpu	100	96.879	ENSPPAG00000038652	HNRNPU	100	96.879	Pan_paniscus
ENSNGAG00000019075	Hnrnpu	100	94.545	ENSPPRG00000002662	HNRNPU	99	98.684	Panthera_pardus
ENSNGAG00000019075	Hnrnpu	100	96.879	ENSPTRG00000002182	HNRNPU	100	96.879	Pan_troglodytes
ENSNGAG00000019075	Hnrnpu	100	96.504	ENSPANG00000011643	HNRNPU	100	96.504	Papio_anubis
ENSNGAG00000019075	Hnrnpu	75	65.087	ENSPKIG00000006885	hnrnpua	99	57.914	Paramormyrops_kingsleyae
ENSNGAG00000019075	Hnrnpu	75	66.826	ENSPKIG00000022332	hnrnpub	99	59.058	Paramormyrops_kingsleyae
ENSNGAG00000019075	Hnrnpu	100	89.976	ENSPCIG00000008657	HNRNPU	98	92.221	Phascolarctos_cinereus
ENSNGAG00000019075	Hnrnpu	59	64.043	ENSPFOG00000002908	hnrnpub	99	49.481	Poecilia_formosa
ENSNGAG00000019075	Hnrnpu	76	54.185	ENSPLAG00000004160	hnrnpub	99	49.595	Poecilia_latipinna
ENSNGAG00000019075	Hnrnpu	100	95.421	ENSPCOG00000018655	-	100	95.421	Propithecus_coquereli
ENSNGAG00000019075	Hnrnpu	100	91.315	ENSPCOG00000003883	-	100	90.943	Propithecus_coquereli
ENSNGAG00000019075	Hnrnpu	100	94.424	ENSPVAG00000002581	HNRNPU	100	94.424	Pteropus_vampyrus
ENSNGAG00000019075	Hnrnpu	75	57.640	ENSPNYG00000021642	hnrnpub	80	56.383	Pundamilia_nyererei
ENSNGAG00000019075	Hnrnpu	99	57.025	ENSPNAG00000001055	hnrnpub	99	56.198	Pygocentrus_nattereri
ENSNGAG00000019075	Hnrnpu	100	97.622	ENSRNOG00000033790	Hnrnpu	100	97.622	Rattus_norvegicus
ENSNGAG00000019075	Hnrnpu	100	96.005	ENSRBIG00000031519	HNRNPU	100	96.005	Rhinopithecus_bieti
ENSNGAG00000019075	Hnrnpu	100	96.526	ENSRROG00000041642	HNRNPU	100	96.526	Rhinopithecus_roxellana
ENSNGAG00000019075	Hnrnpu	99	59.264	ENSSFOG00015001124	hnrnpub	99	57.126	Scleropages_formosus
ENSNGAG00000019075	Hnrnpu	94	60.682	ENSSFOG00015019004	hnrnpu	98	60.255	Scleropages_formosus
ENSNGAG00000019075	Hnrnpu	75	55.117	ENSSDUG00000005912	hnrnpub	99	51.189	Seriola_dumerili
ENSNGAG00000019075	Hnrnpu	75	54.971	ENSSLDG00000004899	hnrnpub	99	51.071	Seriola_lalandi_dorsalis
ENSNGAG00000019075	Hnrnpu	100	77.871	ENSSPUG00000011393	HNRNPU	100	79.735	Sphenodon_punctatus
ENSNGAG00000019075	Hnrnpu	69	61.170	ENSSPAG00000011853	hnrnpub	99	52.392	Stegastes_partitus
ENSNGAG00000019075	Hnrnpu	100	96.774	ENSSSCG00000010877	HNRNPU	100	96.774	Sus_scrofa
ENSNGAG00000019075	Hnrnpu	75	57.164	ENSTRUG00000007759	hnrnpub	79	57.740	Takifugu_rubripes
ENSNGAG00000019075	Hnrnpu	79	76.744	ENSTNIG00000009725	hnrnpub	90	76.744	Tetraodon_nigroviridis
ENSNGAG00000019075	Hnrnpu	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSNGAG00000019075	Hnrnpu	100	94.667	ENSUAMG00000021120	HNRNPU	99	99.060	Ursus_americanus
ENSNGAG00000019075	Hnrnpu	89	95.114	ENSUMAG00000012322	HNRNPU	98	94.316	Ursus_maritimus
ENSNGAG00000019075	Hnrnpu	80	92.857	ENSVPAG00000010520	HNRNPU	91	92.857	Vicugna_pacos
ENSNGAG00000019075	Hnrnpu	100	96.898	ENSVVUG00000026524	HNRNPU	100	96.898	Vulpes_vulpes
ENSNGAG00000019075	Hnrnpu	99	66.910	ENSXETG00000011386	hnrnpu	99	70.197	Xenopus_tropicalis
ENSNGAG00000019075	Hnrnpu	76	53.744	ENSXMAG00000010356	hnrnpub	99	49.770	Xiphophorus_maculatus