EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000019570 (Gene tree)
Gene ID: 103731024
Gene Symbol: Fam172a
Alias: 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|pEN87
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 400731 bases
Position: chrKL199941.1:1210492-1611222
Accession: 103731024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000019899	Arb2	PF09757.9	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000025566	-	921	-	ENSNGAP00000019901	306 (aa)	-	UPI0004ED375D
ENSNGAT00000025564	-	1113	XM_008829338	ENSNGAP00000019899	370 (aa)	XP_008827560	UPI0004ED247C

Gene Model

Click here to download ENSNGAG00000019570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019570	Fam172a	100	97.568	ENSG00000113391	FAM172A	100	100.000	Homo_sapiens
ENSNGAG00000019570	Fam172a	61	38.528	ENSAPLG00000011555	-	97	38.528	Anas_platyrhynchos
ENSNGAG00000019570	Fam172a	100	88.378	ENSAPLG00000004055	FAM172A	89	88.378	Anas_platyrhynchos
ENSNGAG00000019570	Fam172a	90	88.253	ENSACAG00000013305	FAM172A	86	88.253	Anolis_carolinensis
ENSNGAG00000019570	Fam172a	88	91.077	ENSANAG00000035869	FAM172A	86	95.455	Aotus_nancymaae
ENSNGAG00000019570	Fam172a	100	98.108	ENSBTAG00000050195	FAM172A	89	98.108	Bos_taurus
ENSNGAG00000019570	Fam172a	100	97.568	ENSCJAG00000010444	FAM172A	89	97.568	Callithrix_jacchus
ENSNGAG00000019570	Fam172a	88	98.457	ENSCAFG00000008064	FAM172A	87	98.457	Canis_familiaris
ENSNGAG00000019570	Fam172a	100	96.757	ENSCAFG00020006210	FAM172A	94	98.099	Canis_lupus_dingo
ENSNGAG00000019570	Fam172a	100	98.108	ENSCHIG00000008440	FAM172A	89	98.108	Capra_hircus
ENSNGAG00000019570	Fam172a	72	97.744	ENSTSYG00000006286	FAM172A	85	97.744	Carlito_syrichta
ENSNGAG00000019570	Fam172a	61	87.611	ENSCAPG00000014103	-	100	87.611	Cavia_aperea
ENSNGAG00000019570	Fam172a	100	97.027	ENSCCAG00000023116	FAM172A	100	97.027	Cebus_capucinus
ENSNGAG00000019570	Fam172a	100	88.108	ENSCLAG00000005472	FAM172A	100	97.468	Chinchilla_lanigera
ENSNGAG00000019570	Fam172a	97	43.902	ENSCPBG00000004402	-	96	43.902	Chrysemys_picta_bellii
ENSNGAG00000019570	Fam172a	73	96.667	ENSCANG00000040412	FAM172A	92	96.667	Colobus_angolensis_palliatus
ENSNGAG00000019570	Fam172a	100	97.297	ENSDNOG00000004689	FAM172A	89	97.297	Dasypus_novemcinctus
ENSNGAG00000019570	Fam172a	73	96.667	ENSDORG00000013558	Fam172a	88	96.667	Dipodomys_ordii
ENSNGAG00000019570	Fam172a	89	40.303	ENSEBUG00000016097	-	62	40.303	Eptatretus_burgeri
ENSNGAG00000019570	Fam172a	100	94.595	ENSECAG00000018274	FAM172A	89	94.595	Equus_caballus
ENSNGAG00000019570	Fam172a	91	95.821	ENSEEUG00000002887	FAM172A	80	95.821	Erinaceus_europaeus
ENSNGAG00000019570	Fam172a	99	68.633	ENSELUG00000017647	fam172a	88	68.633	Esox_lucius
ENSNGAG00000019570	Fam172a	100	98.108	ENSFCAG00000025443	FAM172A	89	98.108	Felis_catus
ENSNGAG00000019570	Fam172a	88	89.538	ENSFALG00000009072	FAM172A	87	89.538	Ficedula_albicollis
ENSNGAG00000019570	Fam172a	96	43.733	ENSFALG00000006501	-	100	43.733	Ficedula_albicollis
ENSNGAG00000019570	Fam172a	100	88.919	ENSGALG00000014661	FAM172A	89	88.919	Gallus_gallus
ENSNGAG00000019570	Fam172a	100	91.081	ENSGAGG00000003839	FAM172A	89	91.081	Gopherus_agassizii
ENSNGAG00000019570	Fam172a	94	45.042	ENSGAGG00000022828	-	93	45.042	Gopherus_agassizii
ENSNGAG00000019570	Fam172a	100	96.757	ENSGGOG00000010296	FAM172A	92	95.926	Gorilla_gorilla
ENSNGAG00000019570	Fam172a	100	94.595	ENSHGLG00000011178	FAM172A	100	96.203	Heterocephalus_glaber_female
ENSNGAG00000019570	Fam172a	87	96.904	ENSHGLG00100013340	FAM172A	100	96.203	Heterocephalus_glaber_male
ENSNGAG00000019570	Fam172a	100	98.378	ENSSTOG00000009918	FAM172A	89	98.378	Ictidomys_tridecemlineatus
ENSNGAG00000019570	Fam172a	96	48.451	ENSLACG00000001532	si:ch73-41e3.7	93	48.451	Latimeria_chalumnae
ENSNGAG00000019570	Fam172a	100	75.603	ENSLOCG00000001629	fam172a	89	76.408	Lepisosteus_oculatus
ENSNGAG00000019570	Fam172a	73	96.667	ENSMFAG00000001171	FAM172A	92	96.667	Macaca_fascicularis
ENSNGAG00000019570	Fam172a	100	97.297	ENSMNEG00000039938	FAM172A	92	96.667	Macaca_nemestrina
ENSNGAG00000019570	Fam172a	100	98.378	ENSMICG00000030403	FAM172A	89	98.378	Microcebus_murinus
ENSNGAG00000019570	Fam172a	100	95.946	ENSMOCG00000003613	Fam172a	100	95.946	Microtus_ochrogaster
ENSNGAG00000019570	Fam172a	100	90.000	ENSMODG00000020131	FAM172A	89	90.000	Monodelphis_domestica
ENSNGAG00000019570	Fam172a	84	94.937	MGP_PahariEiJ_G0015818	Fam172a	100	94.937	Mus_pahari
ENSNGAG00000019570	Fam172a	73	96.667	ENSNLEG00000013903	FAM172A	89	96.667	Nomascus_leucogenys
ENSNGAG00000019570	Fam172a	88	91.049	ENSOANG00000011068	FAM172A	87	91.049	Ornithorhynchus_anatinus
ENSNGAG00000019570	Fam172a	97	97.214	ENSOCUG00000007299	FAM172A	85	97.214	Oryctolagus_cuniculus
ENSNGAG00000019570	Fam172a	100	96.216	ENSOGAG00000015189	FAM172A	89	96.216	Otolemur_garnettii
ENSNGAG00000019570	Fam172a	91	94.659	ENSOARG00000016711	FAM172A	77	94.659	Ovis_aries
ENSNGAG00000019570	Fam172a	73	97.037	ENSPPAG00000030542	FAM172A	92	97.037	Pan_paniscus
ENSNGAG00000019570	Fam172a	100	98.108	ENSPPRG00000006653	FAM172A	89	98.108	Panthera_pardus
ENSNGAG00000019570	Fam172a	100	98.108	ENSPTIG00000012681	FAM172A	89	98.108	Panthera_tigris_altaica
ENSNGAG00000019570	Fam172a	73	97.037	ENSPTRG00000017074	FAM172A	92	97.037	Pan_troglodytes
ENSNGAG00000019570	Fam172a	73	96.667	ENSPANG00000011687	FAM172A	92	96.667	Papio_anubis
ENSNGAG00000019570	Fam172a	97	74.722	ENSPKIG00000012314	fam172a	87	91.228	Paramormyrops_kingsleyae
ENSNGAG00000019570	Fam172a	100	96.486	ENSPEMG00000009604	-	100	97.468	Peromyscus_maniculatus_bairdii
ENSNGAG00000019570	Fam172a	100	90.000	ENSPCIG00000028612	FAM172A	89	90.000	Phascolarctos_cinereus
ENSNGAG00000019570	Fam172a	62	96.943	ENSPCOG00000024072	FAM172A	93	96.943	Propithecus_coquereli
ENSNGAG00000019570	Fam172a	73	94.796	ENSRNOG00000013844	Fam172a	99	94.796	Rattus_norvegicus
ENSNGAG00000019570	Fam172a	73	96.667	ENSRROG00000023807	FAM172A	92	96.667	Rhinopithecus_roxellana
ENSNGAG00000019570	Fam172a	100	97.297	ENSSBOG00000019860	FAM172A	89	97.297	Saimiri_boliviensis_boliviensis
ENSNGAG00000019570	Fam172a	100	90.000	ENSSHAG00000013743	FAM172A	89	90.000	Sarcophilus_harrisii
ENSNGAG00000019570	Fam172a	100	87.568	ENSSPUG00000008161	FAM172A	89	87.568	Sphenodon_punctatus
ENSNGAG00000019570	Fam172a	100	98.108	ENSSSCG00000027608	FAM172A	100	98.108	Sus_scrofa
ENSNGAG00000019570	Fam172a	100	87.027	ENSTGUG00000000715	FAM172A	97	87.027	Taeniopygia_guttata
ENSNGAG00000019570	Fam172a	90	47.024	ENSTGUG00000013623	-	100	47.024	Taeniopygia_guttata
ENSNGAG00000019570	Fam172a	81	55.592	ENSTNIG00000009902	fam172a	92	57.843	Tetraodon_nigroviridis
ENSNGAG00000019570	Fam172a	100	94.865	ENSTTRG00000001521	FAM172A	89	94.865	Tursiops_truncatus
ENSNGAG00000019570	Fam172a	100	98.108	ENSUMAG00000005442	FAM172A	89	98.108	Ursus_maritimus
ENSNGAG00000019570	Fam172a	100	96.757	ENSVVUG00000022112	FAM172A	89	96.757	Vulpes_vulpes
ENSNGAG00000019570	Fam172a	98	43.597	ENSXETG00000033027	-	95	43.597	Xenopus_tropicalis
ENSNGAG00000019570	Fam172a	100	81.671	ENSXETG00000011592	fam172a	88	81.671	Xenopus_tropicalis