EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000019598 (Gene tree)
Gene ID: 103732135
Gene Symbol: Ercc3
Alias: XPB
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 53152 bases
Position: chrKL200246.1:270939-324090
Accession: 103732135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000019939	ResIII	PF04851.15	1.3e-15	1	1
ENSNGAP00000019943	ResIII	PF04851.15	1.4e-15	1	1
ENSNGAP00000019952	ResIII	PF04851.15	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000025608	-	2397	-	ENSNGAP00000019943	775 (aa)	-	-
ENSNGAT00000025617	-	2346	-	ENSNGAP00000019952	781 (aa)	-	-
ENSNGAT00000025604	-	2373	XM_008830659	ENSNGAP00000019939	738 (aa)	XP_008828881	-

Gene Model

Click here to download ENSNGAG00000019598's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03022	Basal transcription factors	KEGG
ngi03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019598	Ercc3	100	97.158	ENSG00000163161	ERCC3	99	100.000	Homo_sapiens
ENSNGAG00000019598	Ercc3	98	89.655	ENSAPOG00000014383	ercc3	97	87.042	Acanthochromis_polyacanthus
ENSNGAG00000019598	Ercc3	100	96.482	ENSAMEG00000016840	ERCC3	99	93.152	Ailuropoda_melanoleuca
ENSNGAG00000019598	Ercc3	98	88.736	ENSACIG00000000126	ercc3	96	86.248	Amphilophus_citrinellus
ENSNGAG00000019598	Ercc3	99	89.281	ENSAOCG00000009396	ercc3	97	86.928	Amphiprion_ocellaris
ENSNGAG00000019598	Ercc3	99	89.281	ENSAPEG00000023077	ercc3	97	86.928	Amphiprion_percula
ENSNGAG00000019598	Ercc3	99	88.602	ENSATEG00000014860	ercc3	97	86.257	Anabas_testudineus
ENSNGAG00000019598	Ercc3	91	94.030	ENSAPLG00000012068	ERCC3	96	91.379	Anas_platyrhynchos
ENSNGAG00000019598	Ercc3	91	93.926	ENSACAG00000009919	ERCC3	97	91.571	Anolis_carolinensis
ENSNGAG00000019598	Ercc3	100	97.294	ENSANAG00000031091	ERCC3	99	93.478	Aotus_nancymaae
ENSNGAG00000019598	Ercc3	99	88.738	ENSACLG00000022508	ercc3	97	85.995	Astatotilapia_calliptera
ENSNGAG00000019598	Ercc3	99	88.995	ENSAMXG00000036947	ercc3	97	86.257	Astyanax_mexicanus
ENSNGAG00000019598	Ercc3	100	97.023	ENSBTAG00000020777	ERCC3	99	93.103	Bos_taurus
ENSNGAG00000019598	Ercc3	98	64.382	WBGene00013441	xpb-1	97	63.103	Caenorhabditis_elegans
ENSNGAG00000019598	Ercc3	100	97.158	ENSCJAG00000010416	ERCC3	99	93.350	Callithrix_jacchus
ENSNGAG00000019598	Ercc3	100	97.294	ENSCAFG00000004497	ERCC3	99	94.057	Canis_familiaris
ENSNGAG00000019598	Ercc3	100	97.294	ENSCAFG00020003495	ERCC3	99	94.057	Canis_lupus_dingo
ENSNGAG00000019598	Ercc3	100	97.294	ENSCHIG00000014551	ERCC3	99	93.359	Capra_hircus
ENSNGAG00000019598	Ercc3	99	95.902	ENSTSYG00000004137	ERCC3	94	95.634	Carlito_syrichta
ENSNGAG00000019598	Ercc3	89	80.153	ENSCAPG00000017027	ERCC3	97	78.382	Cavia_aperea
ENSNGAG00000019598	Ercc3	100	96.752	ENSCPOG00000002144	ERCC3	99	92.720	Cavia_porcellus
ENSNGAG00000019598	Ercc3	100	97.294	ENSCCAG00000024421	ERCC3	99	93.478	Cebus_capucinus
ENSNGAG00000019598	Ercc3	100	97.429	ENSCATG00000032313	ERCC3	99	93.606	Cercocebus_atys
ENSNGAG00000019598	Ercc3	100	97.429	ENSCLAG00000002965	ERCC3	91	97.429	Chinchilla_lanigera
ENSNGAG00000019598	Ercc3	100	97.294	ENSCSAG00000016827	ERCC3	99	93.478	Chlorocebus_sabaeus
ENSNGAG00000019598	Ercc3	82	97.076	ENSCHOG00000007414	ERCC3	82	97.076	Choloepus_hoffmanni
ENSNGAG00000019598	Ercc3	91	93.926	ENSCPBG00000013638	ERCC3	99	90.125	Chrysemys_picta_bellii
ENSNGAG00000019598	Ercc3	95	73.333	ENSCING00000002867	ercc3	94	71.162	Ciona_intestinalis
ENSNGAG00000019598	Ercc3	100	97.158	ENSCANG00000007094	ERCC3	99	93.350	Colobus_angolensis_palliatus
ENSNGAG00000019598	Ercc3	100	97.294	ENSCGRG00001009426	Ercc3	99	93.928	Cricetulus_griseus_chok1gshd
ENSNGAG00000019598	Ercc3	100	96.211	ENSCGRG00000015547	Ercc3	98	95.957	Cricetulus_griseus_crigri
ENSNGAG00000019598	Ercc3	99	87.653	ENSCSEG00000016479	ercc3	97	85.209	Cynoglossus_semilaevis
ENSNGAG00000019598	Ercc3	99	89.688	ENSCVAG00000015177	ercc3	97	86.911	Cyprinodon_variegatus
ENSNGAG00000019598	Ercc3	96	90.948	ENSDARG00000002402	ercc3	99	85.077	Danio_rerio
ENSNGAG00000019598	Ercc3	54	98.741	ENSDNOG00000035027	ERCC3	86	98.500	Dasypus_novemcinctus
ENSNGAG00000019598	Ercc3	100	97.158	ENSDORG00000004671	Ercc3	99	93.928	Dipodomys_ordii
ENSNGAG00000019598	Ercc3	99	69.721	FBgn0001179	hay	95	69.342	Drosophila_melanogaster
ENSNGAG00000019598	Ercc3	89	96.907	ENSETEG00000019887	ERCC3	90	92.026	Echinops_telfairi
ENSNGAG00000019598	Ercc3	99	80.537	ENSEBUG00000009773	ercc3	99	77.468	Eptatretus_burgeri
ENSNGAG00000019598	Ercc3	100	95.125	ENSEASG00005022466	ERCC3	99	92.065	Equus_asinus_asinus
ENSNGAG00000019598	Ercc3	100	97.700	ENSECAG00000006589	ERCC3	99	94.444	Equus_caballus
ENSNGAG00000019598	Ercc3	99	95.498	ENSEEUG00000001057	ERCC3	98	95.944	Erinaceus_europaeus
ENSNGAG00000019598	Ercc3	99	88.043	ENSELUG00000000089	ercc3	94	88.043	Esox_lucius
ENSNGAG00000019598	Ercc3	100	97.429	ENSFCAG00000006989	ERCC3	95	97.429	Felis_catus
ENSNGAG00000019598	Ercc3	99	92.224	ENSFALG00000003936	ERCC3	91	93.258	Ficedula_albicollis
ENSNGAG00000019598	Ercc3	100	96.752	ENSFDAG00000011924	ERCC3	95	96.496	Fukomys_damarensis
ENSNGAG00000019598	Ercc3	99	89.145	ENSFHEG00000005185	ercc3	97	86.387	Fundulus_heteroclitus
ENSNGAG00000019598	Ercc3	99	85.753	ENSGMOG00000018032	ercc3	94	85.482	Gadus_morhua
ENSNGAG00000019598	Ercc3	96	93.512	ENSGALG00000011515	ERCC3	97	90.369	Gallus_gallus
ENSNGAG00000019598	Ercc3	99	89.417	ENSGAFG00000011936	ercc3	97	86.649	Gambusia_affinis
ENSNGAG00000019598	Ercc3	99	87.805	ENSGACG00000015218	ercc3	97	85.369	Gasterosteus_aculeatus
ENSNGAG00000019598	Ercc3	91	93.926	ENSGAGG00000018579	ERCC3	99	90.125	Gopherus_agassizii
ENSNGAG00000019598	Ercc3	100	97.294	ENSGGOG00000015255	ERCC3	99	93.478	Gorilla_gorilla
ENSNGAG00000019598	Ercc3	99	88.738	ENSHBUG00000003818	ercc3	97	85.995	Haplochromis_burtoni
ENSNGAG00000019598	Ercc3	100	97.429	ENSHGLG00000011014	ERCC3	99	93.606	Heterocephalus_glaber_female
ENSNGAG00000019598	Ercc3	100	97.429	ENSHGLG00100013806	ERCC3	99	93.606	Heterocephalus_glaber_male
ENSNGAG00000019598	Ercc3	99	88.060	ENSHCOG00000016924	ercc3	97	85.340	Hippocampus_comes
ENSNGAG00000019598	Ercc3	99	88.467	ENSIPUG00000021000	ercc3	97	85.976	Ictalurus_punctatus
ENSNGAG00000019598	Ercc3	100	97.970	ENSSTOG00000011001	ERCC3	99	94.574	Ictidomys_tridecemlineatus
ENSNGAG00000019598	Ercc3	90	96.828	ENSJJAG00000001117	Ercc3	97	94.169	Jaculus_jaculus
ENSNGAG00000019598	Ercc3	99	89.417	ENSKMAG00000021764	ercc3	97	86.911	Kryptolebias_marmoratus
ENSNGAG00000019598	Ercc3	99	88.195	ENSLBEG00000000468	ercc3	97	85.471	Labrus_bergylta
ENSNGAG00000019598	Ercc3	98	87.449	ENSLACG00000014815	ERCC3	99	83.417	Latimeria_chalumnae
ENSNGAG00000019598	Ercc3	95	85.248	ENSLOCG00000010907	ercc3	87	85.248	Lepisosteus_oculatus
ENSNGAG00000019598	Ercc3	100	97.023	ENSLAFG00000014866	ERCC3	99	93.350	Loxodonta_africana
ENSNGAG00000019598	Ercc3	100	97.429	ENSMFAG00000003370	ERCC3	99	93.606	Macaca_fascicularis
ENSNGAG00000019598	Ercc3	100	92.924	ENSMNEG00000004215	ERCC3	95	97.381	Macaca_nemestrina
ENSNGAG00000019598	Ercc3	100	97.429	ENSMLEG00000042061	ERCC3	99	93.606	Mandrillus_leucophaeus
ENSNGAG00000019598	Ercc3	99	88.859	ENSMAMG00000004505	ercc3	97	86.107	Mastacembelus_armatus
ENSNGAG00000019598	Ercc3	99	88.738	ENSMZEG00005004854	ercc3	97	85.995	Maylandia_zebra
ENSNGAG00000019598	Ercc3	89	93.930	ENSMGAG00000011706	ERCC3	97	91.095	Meleagris_gallopavo
ENSNGAG00000019598	Ercc3	100	97.027	ENSMAUG00000004515	Ercc3	99	93.231	Mesocricetus_auratus
ENSNGAG00000019598	Ercc3	100	97.700	ENSMICG00000009578	ERCC3	99	94.315	Microcebus_murinus
ENSNGAG00000019598	Ercc3	100	97.294	ENSMOCG00000021767	Ercc3	95	97.294	Microtus_ochrogaster
ENSNGAG00000019598	Ercc3	98	87.707	ENSMMOG00000018174	ercc3	95	85.389	Mola_mola
ENSNGAG00000019598	Ercc3	96	96.624	ENSMODG00000018695	ERCC3	99	92.636	Monodelphis_domestica
ENSNGAG00000019598	Ercc3	99	88.602	ENSMALG00000014944	ercc3	94	88.331	Monopterus_albus
ENSNGAG00000019598	Ercc3	100	97.429	MGP_CAROLIEiJ_G0022075	Ercc3	95	97.429	Mus_caroli
ENSNGAG00000019598	Ercc3	100	96.892	ENSMUSG00000024382	Ercc3	95	96.892	Mus_musculus
ENSNGAG00000019598	Ercc3	100	97.564	MGP_PahariEiJ_G0018809	Ercc3	95	97.564	Mus_pahari
ENSNGAG00000019598	Ercc3	100	97.162	MGP_SPRETEiJ_G0022987	Ercc3	95	97.162	Mus_spretus
ENSNGAG00000019598	Ercc3	100	97.564	ENSMPUG00000012021	ERCC3	99	94.315	Mustela_putorius_furo
ENSNGAG00000019598	Ercc3	92	91.533	ENSMLUG00000007429	ERCC3	95	91.533	Myotis_lucifugus
ENSNGAG00000019598	Ercc3	99	88.738	ENSNBRG00000019074	ercc3	97	85.995	Neolamprologus_brichardi
ENSNGAG00000019598	Ercc3	91	94.948	ENSNLEG00000015665	ERCC3	96	90.922	Nomascus_leucogenys
ENSNGAG00000019598	Ercc3	100	94.046	ENSOPRG00000004553	ERCC3	99	90.026	Ochotona_princeps
ENSNGAG00000019598	Ercc3	100	97.564	ENSODEG00000005795	ERCC3	95	97.564	Octodon_degus
ENSNGAG00000019598	Ercc3	99	88.738	ENSONIG00000003255	ercc3	97	85.995	Oreochromis_niloticus
ENSNGAG00000019598	Ercc3	100	97.700	ENSOCUG00000002248	ERCC3	99	94.315	Oryctolagus_cuniculus
ENSNGAG00000019598	Ercc3	99	87.788	ENSORLG00000004393	ercc3	97	85.340	Oryzias_latipes
ENSNGAG00000019598	Ercc3	99	87.924	ENSORLG00020017718	ercc3	98	87.653	Oryzias_latipes_hni
ENSNGAG00000019598	Ercc3	99	87.788	ENSORLG00015015695	ercc3	97	85.340	Oryzias_latipes_hsok
ENSNGAG00000019598	Ercc3	99	88.331	ENSOMEG00000015374	ercc3	97	85.864	Oryzias_melastigma
ENSNGAG00000019598	Ercc3	100	98.111	ENSOGAG00000009103	ERCC3	99	94.260	Otolemur_garnettii
ENSNGAG00000019598	Ercc3	100	97.158	ENSOARG00000016147	ERCC3	99	93.231	Ovis_aries
ENSNGAG00000019598	Ercc3	100	97.294	ENSPPAG00000036166	ERCC3	99	93.478	Pan_paniscus
ENSNGAG00000019598	Ercc3	100	97.564	ENSPPRG00000001305	ERCC3	95	97.564	Panthera_pardus
ENSNGAG00000019598	Ercc3	91	98.074	ENSPTIG00000016969	ERCC3	97	95.571	Panthera_tigris_altaica
ENSNGAG00000019598	Ercc3	100	97.294	ENSPTRG00000046940	ERCC3	99	93.478	Pan_troglodytes
ENSNGAG00000019598	Ercc3	100	97.429	ENSPANG00000007699	ERCC3	99	93.606	Papio_anubis
ENSNGAG00000019598	Ercc3	99	88.995	ENSPKIG00000001319	ercc3	99	86.170	Paramormyrops_kingsleyae
ENSNGAG00000019598	Ercc3	91	93.926	ENSPSIG00000014682	ERCC3	99	89.722	Pelodiscus_sinensis
ENSNGAG00000019598	Ercc3	96	91.218	ENSPMGG00000017885	ercc3	97	87.533	Periophthalmus_magnuspinnatus
ENSNGAG00000019598	Ercc3	100	97.429	ENSPEMG00000013733	Ercc3	99	94.057	Peromyscus_maniculatus_bairdii
ENSNGAG00000019598	Ercc3	86	82.893	ENSPMAG00000005081	ercc3	90	82.893	Petromyzon_marinus
ENSNGAG00000019598	Ercc3	99	96.438	ENSPCIG00000011821	ERCC3	97	93.586	Phascolarctos_cinereus
ENSNGAG00000019598	Ercc3	97	90.153	ENSPFOG00000015604	ercc3	97	86.649	Poecilia_formosa
ENSNGAG00000019598	Ercc3	97	87.414	ENSPLAG00000022245	ercc3	97	87.732	Poecilia_latipinna
ENSNGAG00000019598	Ercc3	97	90.153	ENSPMEG00000016987	ercc3	97	86.649	Poecilia_mexicana
ENSNGAG00000019598	Ercc3	99	89.824	ENSPREG00000020921	ercc3	97	87.042	Poecilia_reticulata
ENSNGAG00000019598	Ercc3	100	96.486	ENSPPYG00000012769	ERCC3	99	92.720	Pongo_abelii
ENSNGAG00000019598	Ercc3	100	98.106	ENSPCOG00000024903	ERCC3	99	94.246	Propithecus_coquereli
ENSNGAG00000019598	Ercc3	89	95.305	ENSPVAG00000013774	ERCC3	90	92.841	Pteropus_vampyrus
ENSNGAG00000019598	Ercc3	99	88.738	ENSPNYG00000001208	ercc3	97	85.995	Pundamilia_nyererei
ENSNGAG00000019598	Ercc3	99	89.698	ENSPNAG00000005748	ercc3	97	86.780	Pygocentrus_nattereri
ENSNGAG00000019598	Ercc3	100	97.429	ENSRNOG00000013180	Ercc3	99	94.057	Rattus_norvegicus
ENSNGAG00000019598	Ercc3	100	97.158	ENSRBIG00000027692	ERCC3	99	93.350	Rhinopithecus_bieti
ENSNGAG00000019598	Ercc3	100	97.294	ENSRROG00000040673	ERCC3	95	97.294	Rhinopithecus_roxellana
ENSNGAG00000019598	Ercc3	90	58.358	YIL143C	SSL2	83	56.006	Saccharomyces_cerevisiae
ENSNGAG00000019598	Ercc3	100	97.294	ENSSBOG00000023079	ERCC3	99	93.478	Saimiri_boliviensis_boliviensis
ENSNGAG00000019598	Ercc3	96	96.062	ENSSHAG00000007423	ERCC3	97	92.932	Sarcophilus_harrisii
ENSNGAG00000019598	Ercc3	96	90.523	ENSSFOG00015012753	ercc3	97	86.632	Scleropages_formosus
ENSNGAG00000019598	Ercc3	99	87.551	ENSSMAG00000011915	ercc3	97	85.117	Scophthalmus_maximus
ENSNGAG00000019598	Ercc3	99	88.602	ENSSDUG00000021181	ercc3	97	85.995	Seriola_dumerili
ENSNGAG00000019598	Ercc3	99	88.602	ENSSLDG00000008744	ercc3	95	85.995	Seriola_lalandi_dorsalis
ENSNGAG00000019598	Ercc3	58	87.067	ENSSARG00000000751	-	85	87.067	Sorex_araneus
ENSNGAG00000019598	Ercc3	90	92.587	ENSSPUG00000015183	ERCC3	89	90.116	Sphenodon_punctatus
ENSNGAG00000019598	Ercc3	99	89.417	ENSSPAG00000004748	ercc3	97	86.780	Stegastes_partitus
ENSNGAG00000019598	Ercc3	100	97.700	ENSSSCG00000015721	ERCC3	96	97.678	Sus_scrofa
ENSNGAG00000019598	Ercc3	99	93.699	ENSTGUG00000004920	-	99	89.793	Taeniopygia_guttata
ENSNGAG00000019598	Ercc3	99	87.772	ENSTRUG00000017185	ercc3	99	83.291	Takifugu_rubripes
ENSNGAG00000019598	Ercc3	97	85.455	ENSTNIG00000005457	ercc3	99	83.311	Tetraodon_nigroviridis
ENSNGAG00000019598	Ercc3	79	97.423	ENSTBEG00000009381	ERCC3	80	93.193	Tupaia_belangeri
ENSNGAG00000019598	Ercc3	66	98.763	ENSUAMG00000009589	-	99	93.371	Ursus_americanus
ENSNGAG00000019598	Ercc3	100	96.617	ENSUMAG00000008361	ERCC3	99	93.411	Ursus_maritimus
ENSNGAG00000019598	Ercc3	91	97.778	ENSVVUG00000010431	ERCC3	99	93.733	Vulpes_vulpes
ENSNGAG00000019598	Ercc3	99	91.486	ENSXETG00000033646	ercc3	97	89.295	Xenopus_tropicalis
ENSNGAG00000019598	Ercc3	98	89.379	ENSXCOG00000001791	ercc3	96	86.863	Xiphophorus_couchianus
ENSNGAG00000019598	Ercc3	99	89.552	ENSXMAG00000003641	ercc3	94	90.653	Xiphophorus_maculatus