EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000019698 (Gene tree)
Gene ID: 103729928
Gene Symbol: Rbm42
Alias: 1700003D06Rik|3100004P22Rik
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 11416 bases
Position: chrKL199694.1:624812-636227
Accession: 103729928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000020096	RRM_1	PF00076.22	5.7e-18	1	1
ENSNGAP00000020094	RRM_1	PF00076.22	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000025761	-	1714	XM_008828028	ENSNGAP00000020094	478 (aa)	XP_008826250	-
ENSNGAT00000025763	-	1587	XM_008828031	ENSNGAP00000020096	449 (aa)	XP_008826253	-

Gene Model

Click here to download ENSNGAG00000019698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019698	Rbm42	99	96.250	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSNGAG00000019698	Rbm42	99	96.868	ENSAMEG00000000524	RBM42	100	96.868	Ailuropoda_melanoleuca
ENSNGAG00000019698	Rbm42	99	96.646	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSNGAG00000019698	Rbm42	99	96.226	ENSBTAG00000013440	RBM42	100	96.226	Bos_taurus
ENSNGAG00000019698	Rbm42	99	96.875	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSNGAG00000019698	Rbm42	99	90.356	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSNGAG00000019698	Rbm42	99	96.205	ENSCHIG00000009518	RBM42	100	96.205	Capra_hircus
ENSNGAG00000019698	Rbm42	99	96.653	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSNGAG00000019698	Rbm42	81	98.187	ENSCAPG00000009566	RBM42	99	98.187	Cavia_aperea
ENSNGAG00000019698	Rbm42	100	96.681	ENSCPOG00000012365	RBM42	100	96.681	Cavia_porcellus
ENSNGAG00000019698	Rbm42	99	97.065	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSNGAG00000019698	Rbm42	99	96.639	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSNGAG00000019698	Rbm42	100	96.681	ENSCLAG00000012865	RBM42	100	96.681	Chinchilla_lanigera
ENSNGAG00000019698	Rbm42	99	95.787	ENSCSAG00000004422	RBM42	100	95.787	Chlorocebus_sabaeus
ENSNGAG00000019698	Rbm42	99	87.975	ENSCANG00000030272	RBM42	100	87.975	Colobus_angolensis_palliatus
ENSNGAG00000019698	Rbm42	100	96.862	ENSCGRG00001018540	Rbm42	100	96.862	Cricetulus_griseus_chok1gshd
ENSNGAG00000019698	Rbm42	99	92.708	ENSDNOG00000037397	RBM42	100	95.625	Dasypus_novemcinctus
ENSNGAG00000019698	Rbm42	100	97.327	ENSDORG00000013001	Rbm42	100	97.327	Dipodomys_ordii
ENSNGAG00000019698	Rbm42	75	84.848	ENSETEG00000007878	RBM42	73	84.848	Echinops_telfairi
ENSNGAG00000019698	Rbm42	99	97.528	ENSEASG00005001074	RBM42	100	97.528	Equus_asinus_asinus
ENSNGAG00000019698	Rbm42	99	97.528	ENSECAG00000018215	RBM42	100	97.528	Equus_caballus
ENSNGAG00000019698	Rbm42	99	97.065	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSNGAG00000019698	Rbm42	97	94.433	ENSFDAG00000007440	RBM42	100	96.231	Fukomys_damarensis
ENSNGAG00000019698	Rbm42	99	96.842	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSNGAG00000019698	Rbm42	100	96.214	ENSHGLG00000008418	RBM42	100	96.214	Heterocephalus_glaber_female
ENSNGAG00000019698	Rbm42	100	96.214	ENSHGLG00100018667	RBM42	100	96.214	Heterocephalus_glaber_male
ENSNGAG00000019698	Rbm42	100	96.903	ENSSTOG00000013050	RBM42	100	96.903	Ictidomys_tridecemlineatus
ENSNGAG00000019698	Rbm42	100	95.991	ENSJJAG00000010421	Rbm42	100	95.991	Jaculus_jaculus
ENSNGAG00000019698	Rbm42	97	92.934	ENSLAFG00000014993	RBM42	100	94.363	Loxodonta_africana
ENSNGAG00000019698	Rbm42	99	96.639	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSNGAG00000019698	Rbm42	99	96.413	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSNGAG00000019698	Rbm42	100	95.816	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSNGAG00000019698	Rbm42	99	96.639	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSNGAG00000019698	Rbm42	99	97.275	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSNGAG00000019698	Rbm42	100	96.653	ENSMOCG00000000405	Rbm42	100	96.653	Microtus_ochrogaster
ENSNGAG00000019698	Rbm42	99	96.855	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.855	Mus_caroli
ENSNGAG00000019698	Rbm42	99	96.855	ENSMUSG00000036733	Rbm42	99	96.855	Mus_musculus
ENSNGAG00000019698	Rbm42	99	96.855	MGP_PahariEiJ_G0012770	Rbm42	99	96.855	Mus_pahari
ENSNGAG00000019698	Rbm42	99	96.855	MGP_SPRETEiJ_G0030632	Rbm42	99	96.855	Mus_spretus
ENSNGAG00000019698	Rbm42	99	97.098	ENSMPUG00000006288	RBM42	100	97.098	Mustela_putorius_furo
ENSNGAG00000019698	Rbm42	99	96.436	ENSMLUG00000011334	RBM42	100	96.436	Myotis_lucifugus
ENSNGAG00000019698	Rbm42	70	98.503	ENSNLEG00000011272	-	94	91.620	Nomascus_leucogenys
ENSNGAG00000019698	Rbm42	95	82.789	ENSMEUG00000016300	RBM42	100	84.265	Notamacropus_eugenii
ENSNGAG00000019698	Rbm42	99	93.291	ENSOPRG00000001229	RBM42	100	92.034	Ochotona_princeps
ENSNGAG00000019698	Rbm42	100	96.018	ENSODEG00000013705	RBM42	99	96.018	Octodon_degus
ENSNGAG00000019698	Rbm42	99	95.565	ENSOCUG00000003337	RBM42	100	95.565	Oryctolagus_cuniculus
ENSNGAG00000019698	Rbm42	99	96.017	ENSOGAG00000004144	RBM42	100	96.017	Otolemur_garnettii
ENSNGAG00000019698	Rbm42	97	88.437	ENSOARG00000004926	RBM42	99	91.250	Ovis_aries
ENSNGAG00000019698	Rbm42	99	96.868	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSNGAG00000019698	Rbm42	99	97.065	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSNGAG00000019698	Rbm42	99	96.646	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSNGAG00000019698	Rbm42	99	96.849	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSNGAG00000019698	Rbm42	99	96.624	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSNGAG00000019698	Rbm42	100	97.071	ENSPEMG00000012065	Rbm42	100	97.071	Peromyscus_maniculatus_bairdii
ENSNGAG00000019698	Rbm42	99	95.258	ENSPPYG00000009871	RBM42	100	95.258	Pongo_abelii
ENSNGAG00000019698	Rbm42	88	96.721	ENSPCAG00000013053	RBM42	100	83.229	Procavia_capensis
ENSNGAG00000019698	Rbm42	70	99.399	ENSPCOG00000020672	RBM42	81	99.399	Propithecus_coquereli
ENSNGAG00000019698	Rbm42	99	97.694	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSNGAG00000019698	Rbm42	99	96.646	ENSPVAG00000012815	RBM42	100	96.646	Pteropus_vampyrus
ENSNGAG00000019698	Rbm42	99	97.065	ENSRNOG00000024278	Rbm42	99	97.065	Rattus_norvegicus
ENSNGAG00000019698	Rbm42	99	96.639	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSNGAG00000019698	Rbm42	99	96.868	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSNGAG00000019698	Rbm42	85	99.015	ENSSBOG00000030666	RBM42	100	99.015	Saimiri_boliviensis_boliviensis
ENSNGAG00000019698	Rbm42	99	86.458	ENSSARG00000010724	RBM42	100	86.458	Sorex_araneus
ENSNGAG00000019698	Rbm42	99	95.982	ENSSSCG00000002905	RBM42	100	95.982	Sus_scrofa
ENSNGAG00000019698	Rbm42	99	97.065	ENSUAMG00000020711	RBM42	100	97.065	Ursus_americanus
ENSNGAG00000019698	Rbm42	99	97.065	ENSUMAG00000020223	RBM42	100	97.065	Ursus_maritimus
ENSNGAG00000019698	Rbm42	99	96.429	ENSVVUG00000015117	RBM42	100	96.429	Vulpes_vulpes