EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000019741 (Gene tree)
Gene ID: 103744472
Gene Symbol: Srl
Alias: 9830004M20Rik|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 46922 bases
Position: chrKL199090.1:2318132-2365053
Accession: 103744472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000020162	MMR_HSR1	PF01926.23	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000025829	-	1419	XM_008846254	ENSNGAP00000020162	472 (aa)	XP_008844476	-

Gene Model

Click here to download ENSNGAG00000019741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000019741	Srl	63	35.906	ENSNGAG00000004194	Ehd4	55	35.906
ENSNGAG00000019741	Srl	74	33.714	ENSNGAG00000014439	Ehd3	67	33.604
ENSNGAG00000019741	Srl	82	32.648	ENSNGAG00000018699	Ehd2	65	33.978
ENSNGAG00000019741	Srl	77	33.973	ENSNGAG00000020358	Ehd1	67	33.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019741	Srl	100	95.560	ENSG00000185739	SRL	100	96.984	Homo_sapiens
ENSNGAG00000019741	Srl	100	81.780	ENSAPOG00000018093	srl	100	84.234	Acanthochromis_polyacanthus
ENSNGAG00000019741	Srl	94	76.244	ENSAPOG00000012432	SRL	98	75.113	Acanthochromis_polyacanthus
ENSNGAG00000019741	Srl	98	95.671	ENSAMEG00000010862	SRL	51	96.903	Ailuropoda_melanoleuca
ENSNGAG00000019741	Srl	94	84.615	ENSACIG00000015799	srl	98	84.615	Amphilophus_citrinellus
ENSNGAG00000019741	Srl	94	75.000	ENSACIG00000015419	SRL	99	75.000	Amphilophus_citrinellus
ENSNGAG00000019741	Srl	92	85.023	ENSAOCG00000007574	srl	100	85.023	Amphiprion_ocellaris
ENSNGAG00000019741	Srl	94	76.072	ENSAOCG00000017049	SRL	96	76.072	Amphiprion_ocellaris
ENSNGAG00000019741	Srl	94	71.946	ENSAPEG00000006533	SRL	96	71.946	Amphiprion_percula
ENSNGAG00000019741	Srl	100	81.992	ENSAPEG00000006911	srl	94	85.068	Amphiprion_percula
ENSNGAG00000019741	Srl	94	73.846	ENSATEG00000009643	SRL	52	73.187	Anabas_testudineus
ENSNGAG00000019741	Srl	100	81.780	ENSATEG00000024315	srl	97	83.297	Anabas_testudineus
ENSNGAG00000019741	Srl	100	87.090	ENSACAG00000016380	SRL	85	89.871	Anolis_carolinensis
ENSNGAG00000019741	Srl	98	82.328	ENSACLG00000027685	srl	98	83.778	Astatotilapia_calliptera
ENSNGAG00000019741	Srl	94	72.967	ENSACLG00000024674	SRL	57	73.187	Astatotilapia_calliptera
ENSNGAG00000019741	Srl	88	77.590	ENSAMXG00000038693	SRL	100	72.848	Astyanax_mexicanus
ENSNGAG00000019741	Srl	99	80.467	ENSAMXG00000018789	srl	86	84.127	Astyanax_mexicanus
ENSNGAG00000019741	Srl	96	96.026	ENSBTAG00000001078	SRL	57	96.026	Bos_taurus
ENSNGAG00000019741	Srl	94	97.065	ENSCJAG00000019750	SRL	97	96.280	Callithrix_jacchus
ENSNGAG00000019741	Srl	98	95.879	ENSCAFG00000019233	SRL	84	96.681	Canis_familiaris
ENSNGAG00000019741	Srl	96	96.264	ENSCAFG00020025024	SRL	56	96.264	Canis_lupus_dingo
ENSNGAG00000019741	Srl	99	94.839	ENSCHIG00000017927	SRL	57	96.026	Capra_hircus
ENSNGAG00000019741	Srl	100	95.983	ENSTSYG00000007919	SRL	100	97.912	Carlito_syrichta
ENSNGAG00000019741	Srl	100	97.458	ENSCPOG00000012643	SRL	100	97.458	Cavia_porcellus
ENSNGAG00000019741	Srl	94	90.745	ENSCCAG00000032646	SRL	100	97.098	Cebus_capucinus
ENSNGAG00000019741	Srl	100	95.772	ENSCATG00000032227	-	97	96.499	Cercocebus_atys
ENSNGAG00000019741	Srl	100	97.246	ENSCLAG00000016242	SRL	100	97.246	Chinchilla_lanigera
ENSNGAG00000019741	Srl	82	96.623	ENSCHOG00000001618	SRL	52	96.623	Choloepus_hoffmanni
ENSNGAG00000019741	Srl	96	93.005	ENSCPBG00000026371	SRL	95	88.985	Chrysemys_picta_bellii
ENSNGAG00000019741	Srl	88	60.432	ENSCING00000005231	-	91	60.837	Ciona_intestinalis
ENSNGAG00000019741	Srl	100	95.772	ENSCANG00000035872	SRL	100	96.984	Colobus_angolensis_palliatus
ENSNGAG00000019741	Srl	100	97.669	ENSCGRG00001016630	Srl	100	97.669	Cricetulus_griseus_chok1gshd
ENSNGAG00000019741	Srl	100	97.669	ENSCGRG00000005458	Srl	100	97.669	Cricetulus_griseus_crigri
ENSNGAG00000019741	Srl	100	81.992	ENSCSEG00000016151	srl	97	83.040	Cynoglossus_semilaevis
ENSNGAG00000019741	Srl	99	70.402	ENSCSEG00000011866	SRL	92	71.930	Cynoglossus_semilaevis
ENSNGAG00000019741	Srl	94	75.664	ENSCVAG00000022465	SRL	60	74.779	Cyprinodon_variegatus
ENSNGAG00000019741	Srl	100	81.568	ENSCVAG00000003513	srl	96	84.389	Cyprinodon_variegatus
ENSNGAG00000019741	Srl	100	82.203	ENSDARG00000104587	srl	96	84.222	Danio_rerio
ENSNGAG00000019741	Srl	80	76.823	ENSDARG00000112959	CABZ01072309.1	90	82.849	Danio_rerio
ENSNGAG00000019741	Srl	96	96.009	ENSDNOG00000011643	SRL	54	95.595	Dasypus_novemcinctus
ENSNGAG00000019741	Srl	100	97.669	ENSDORG00000014807	Srl	100	97.669	Dipodomys_ordii
ENSNGAG00000019741	Srl	75	68.067	ENSEBUG00000015937	srl	88	68.103	Eptatretus_burgeri
ENSNGAG00000019741	Srl	96	96.026	ENSEASG00005000942	SRL	55	96.026	Equus_asinus_asinus
ENSNGAG00000019741	Srl	99	95.339	ENSECAG00000024219	SRL	96	96.044	Equus_caballus
ENSNGAG00000019741	Srl	100	77.618	ENSELUG00000015616	srl	94	80.702	Esox_lucius
ENSNGAG00000019741	Srl	100	94.503	ENSFCAG00000022075	SRL	96	96.053	Felis_catus
ENSNGAG00000019741	Srl	96	89.625	ENSFALG00000004328	SRL	64	90.022	Ficedula_albicollis
ENSNGAG00000019741	Srl	100	97.246	ENSFDAG00000006199	SRL	100	97.246	Fukomys_damarensis
ENSNGAG00000019741	Srl	100	71.107	ENSFHEG00000011854	SRL	98	76.697	Fundulus_heteroclitus
ENSNGAG00000019741	Srl	100	81.144	ENSFHEG00000011239	srl	97	82.599	Fundulus_heteroclitus
ENSNGAG00000019741	Srl	93	80.795	ENSGMOG00000014954	srl	99	80.795	Gadus_morhua
ENSNGAG00000019741	Srl	99	88.747	ENSGALG00000038884	SRL	96	89.427	Gallus_gallus
ENSNGAG00000019741	Srl	94	77.376	ENSGAFG00000016984	SRL	98	76.244	Gambusia_affinis
ENSNGAG00000019741	Srl	100	81.144	ENSGAFG00000000010	srl	97	83.820	Gambusia_affinis
ENSNGAG00000019741	Srl	93	82.340	ENSGACG00000011332	srl	99	82.340	Gasterosteus_aculeatus
ENSNGAG00000019741	Srl	100	95.349	ENSGGOG00000011312	-	97	96.499	Gorilla_gorilla
ENSNGAG00000019741	Srl	98	82.328	ENSHBUG00000007581	srl	98	83.778	Haplochromis_burtoni
ENSNGAG00000019741	Srl	94	72.747	ENSHBUG00000015710	SRL	57	72.967	Haplochromis_burtoni
ENSNGAG00000019741	Srl	100	97.669	ENSHGLG00000015271	SRL	100	97.669	Heterocephalus_glaber_female
ENSNGAG00000019741	Srl	100	97.669	ENSHGLG00100019378	SRL	100	97.669	Heterocephalus_glaber_male
ENSNGAG00000019741	Srl	95	72.549	ENSHCOG00000001012	SRL	51	71.460	Hippocampus_comes
ENSNGAG00000019741	Srl	99	80.638	ENSHCOG00000008687	srl	99	83.111	Hippocampus_comes
ENSNGAG00000019741	Srl	100	80.085	ENSIPUG00000012513	srl	96	81.457	Ictalurus_punctatus
ENSNGAG00000019741	Srl	92	70.183	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSNGAG00000019741	Srl	100	97.246	ENSSTOG00000021151	-	100	97.246	Ictidomys_tridecemlineatus
ENSNGAG00000019741	Srl	100	98.305	ENSJJAG00000016400	Srl	100	98.305	Jaculus_jaculus
ENSNGAG00000019741	Srl	93	76.190	ENSKMAG00000019537	SRL	100	76.190	Kryptolebias_marmoratus
ENSNGAG00000019741	Srl	98	81.602	ENSKMAG00000014115	srl	93	85.748	Kryptolebias_marmoratus
ENSNGAG00000019741	Srl	93	75.792	ENSLBEG00000013811	SRL	95	75.792	Labrus_bergylta
ENSNGAG00000019741	Srl	100	81.356	ENSLBEG00000026643	srl	96	82.198	Labrus_bergylta
ENSNGAG00000019741	Srl	96	86.283	ENSLACG00000002825	SRL	99	86.283	Latimeria_chalumnae
ENSNGAG00000019741	Srl	99	82.303	ENSLOCG00000002644	srl	94	85.294	Lepisosteus_oculatus
ENSNGAG00000019741	Srl	95	96.444	ENSLAFG00000006329	SRL	51	96.018	Loxodonta_africana
ENSNGAG00000019741	Srl	91	96.984	ENSMFAG00000037383	SRL	100	96.984	Macaca_fascicularis
ENSNGAG00000019741	Srl	98	95.879	ENSMNEG00000019236	-	96	96.903	Macaca_nemestrina
ENSNGAG00000019741	Srl	100	87.949	ENSMLEG00000032156	SRL	96	88.403	Mandrillus_leucophaeus
ENSNGAG00000019741	Srl	93	73.789	ENSMAMG00000013756	SRL	53	73.789	Mastacembelus_armatus
ENSNGAG00000019741	Srl	99	80.638	ENSMAMG00000023322	srl	94	84.615	Mastacembelus_armatus
ENSNGAG00000019741	Srl	94	72.967	ENSMZEG00005004010	SRL	57	73.187	Maylandia_zebra
ENSNGAG00000019741	Srl	98	82.328	ENSMZEG00005004548	srl	98	83.778	Maylandia_zebra
ENSNGAG00000019741	Srl	99	87.131	ENSMGAG00000009342	SRL	95	91.755	Meleagris_gallopavo
ENSNGAG00000019741	Srl	96	96.053	ENSMICG00000032307	SRL	97	96.061	Microcebus_murinus
ENSNGAG00000019741	Srl	100	97.246	ENSMOCG00000008208	Srl	100	97.246	Microtus_ochrogaster
ENSNGAG00000019741	Srl	94	84.389	ENSMMOG00000013970	srl	98	84.389	Mola_mola
ENSNGAG00000019741	Srl	93	73.026	ENSMMOG00000021572	SRL	99	72.967	Mola_mola
ENSNGAG00000019741	Srl	96	95.806	ENSMODG00000016380	-	51	95.806	Monodelphis_domestica
ENSNGAG00000019741	Srl	89	75.895	ENSMALG00000000670	SRL	98	74.702	Monopterus_albus
ENSNGAG00000019741	Srl	96	82.159	ENSMALG00000005039	srl	99	83.111	Monopterus_albus
ENSNGAG00000019741	Srl	100	98.305	MGP_CAROLIEiJ_G0020400	Srl	100	98.305	Mus_caroli
ENSNGAG00000019741	Srl	100	98.305	ENSMUSG00000022519	Srl	100	98.305	Mus_musculus
ENSNGAG00000019741	Srl	100	98.305	MGP_SPRETEiJ_G0021294	Srl	100	98.305	Mus_spretus
ENSNGAG00000019741	Srl	96	96.460	ENSMPUG00000015025	SRL	55	96.460	Mustela_putorius_furo
ENSNGAG00000019741	Srl	98	95.228	ENSMLUG00000030733	SRL	58	95.228	Myotis_lucifugus
ENSNGAG00000019741	Srl	94	72.967	ENSNBRG00000002422	SRL	60	70.513	Neolamprologus_brichardi
ENSNGAG00000019741	Srl	98	82.328	ENSNBRG00000023775	srl	94	84.615	Neolamprologus_brichardi
ENSNGAG00000019741	Srl	100	89.006	ENSNLEG00000029051	SRL	96	89.716	Nomascus_leucogenys
ENSNGAG00000019741	Srl	97	90.000	ENSOPRG00000000477	-	53	90.749	Ochotona_princeps
ENSNGAG00000019741	Srl	100	97.669	ENSODEG00000013256	SRL	100	97.669	Octodon_degus
ENSNGAG00000019741	Srl	97	82.571	ENSONIG00000005192	srl	96	83.186	Oreochromis_niloticus
ENSNGAG00000019741	Srl	97	95.435	ENSOCUG00000025140	SRL	50	96.476	Oryctolagus_cuniculus
ENSNGAG00000019741	Srl	100	80.720	ENSORLG00000008291	srl	92	85.309	Oryzias_latipes
ENSNGAG00000019741	Srl	96	74.558	ENSORLG00000015064	SRL	99	74.558	Oryzias_latipes
ENSNGAG00000019741	Srl	96	74.779	ENSORLG00020018173	SRL	99	74.779	Oryzias_latipes_hni
ENSNGAG00000019741	Srl	100	80.932	ENSORLG00020019784	srl	79	85.567	Oryzias_latipes_hni
ENSNGAG00000019741	Srl	100	80.508	ENSORLG00015009342	srl	93	81.938	Oryzias_latipes_hsok
ENSNGAG00000019741	Srl	96	74.779	ENSORLG00015019063	SRL	99	74.779	Oryzias_latipes_hsok
ENSNGAG00000019741	Srl	94	73.523	ENSOMEG00000005682	SRL	53	73.523	Oryzias_melastigma
ENSNGAG00000019741	Srl	100	80.720	ENSOMEG00000010006	srl	98	83.636	Oryzias_melastigma
ENSNGAG00000019741	Srl	96	96.256	ENSOGAG00000029266	SRL	55	96.256	Otolemur_garnettii
ENSNGAG00000019741	Srl	99	94.839	ENSOARG00000003074	SRL	57	96.231	Ovis_aries
ENSNGAG00000019741	Srl	97	96.288	ENSPPAG00000024919	-	100	96.984	Pan_paniscus
ENSNGAG00000019741	Srl	100	94.715	ENSPPRG00000010274	SRL	100	97.680	Panthera_pardus
ENSNGAG00000019741	Srl	100	94.715	ENSPTIG00000015162	SRL	100	97.680	Panthera_tigris_altaica
ENSNGAG00000019741	Srl	100	95.560	ENSPTRG00000007712	SRL	100	96.984	Pan_troglodytes
ENSNGAG00000019741	Srl	98	95.662	ENSPANG00000013804	SRL	97	96.681	Papio_anubis
ENSNGAG00000019741	Srl	100	81.395	ENSPKIG00000006405	srl	93	84.842	Paramormyrops_kingsleyae
ENSNGAG00000019741	Srl	100	73.941	ENSPKIG00000024974	SRL	88	76.471	Paramormyrops_kingsleyae
ENSNGAG00000019741	Srl	96	90.308	ENSPSIG00000008586	SRL	51	90.308	Pelodiscus_sinensis
ENSNGAG00000019741	Srl	94	73.303	ENSPMGG00000023505	-	99	73.077	Periophthalmus_magnuspinnatus
ENSNGAG00000019741	Srl	96	83.223	ENSPMGG00000021081	srl	97	83.223	Periophthalmus_magnuspinnatus
ENSNGAG00000019741	Srl	100	98.093	ENSPEMG00000015842	Srl	100	98.093	Peromyscus_maniculatus_bairdii
ENSNGAG00000019741	Srl	89	68.119	ENSPMAG00000004786	srl	99	67.890	Petromyzon_marinus
ENSNGAG00000019741	Srl	96	95.122	ENSPCIG00000012128	SRL	98	95.122	Phascolarctos_cinereus
ENSNGAG00000019741	Srl	100	79.545	ENSPFOG00000011408	srl	94	82.237	Poecilia_formosa
ENSNGAG00000019741	Srl	94	76.471	ENSPLAG00000002932	SRL	98	75.339	Poecilia_latipinna
ENSNGAG00000019741	Srl	97	82.353	ENSPLAG00000008017	srl	97	84.045	Poecilia_latipinna
ENSNGAG00000019741	Srl	100	81.356	ENSPMEG00000006745	srl	97	84.045	Poecilia_mexicana
ENSNGAG00000019741	Srl	94	74.179	ENSPMEG00000005890	SRL	59	73.085	Poecilia_mexicana
ENSNGAG00000019741	Srl	100	80.932	ENSPREG00000007751	srl	99	83.820	Poecilia_reticulata
ENSNGAG00000019741	Srl	94	77.602	ENSPREG00000000315	SRL	98	76.471	Poecilia_reticulata
ENSNGAG00000019741	Srl	89	97.375	ENSPPYG00000007053	SRL	98	97.375	Pongo_abelii
ENSNGAG00000019741	Srl	96	94.702	ENSPCAG00000003378	-	51	94.702	Procavia_capensis
ENSNGAG00000019741	Srl	97	96.070	ENSPCOG00000023135	SRL	100	97.216	Propithecus_coquereli
ENSNGAG00000019741	Srl	96	97.124	ENSPVAG00000006586	SRL	56	97.124	Pteropus_vampyrus
ENSNGAG00000019741	Srl	98	82.328	ENSPNYG00000001200	srl	98	83.778	Pundamilia_nyererei
ENSNGAG00000019741	Srl	94	72.967	ENSPNYG00000003423	SRL	57	73.187	Pundamilia_nyererei
ENSNGAG00000019741	Srl	100	79.449	ENSPNAG00000023106	srl	94	82.805	Pygocentrus_nattereri
ENSNGAG00000019741	Srl	97	73.593	ENSPNAG00000007361	-	91	75.339	Pygocentrus_nattereri
ENSNGAG00000019741	Srl	97	97.162	ENSRNOG00000005269	Srl	51	97.162	Rattus_norvegicus
ENSNGAG00000019741	Srl	97	95.435	ENSRBIG00000042358	SRL	51	96.053	Rhinopithecus_bieti
ENSNGAG00000019741	Srl	94	97.065	ENSSBOG00000029273	SRL	97	96.280	Saimiri_boliviensis_boliviensis
ENSNGAG00000019741	Srl	97	95.175	ENSSHAG00000011715	-	51	96.009	Sarcophilus_harrisii
ENSNGAG00000019741	Srl	100	79.339	ENSSFOG00015009773	srl	97	83.700	Scleropages_formosus
ENSNGAG00000019741	Srl	94	76.697	ENSSFOG00015021327	SRL	51	75.328	Scleropages_formosus
ENSNGAG00000019741	Srl	93	73.304	ENSSMAG00000002232	SRL	50	72.088	Scophthalmus_maximus
ENSNGAG00000019741	Srl	100	81.184	ENSSMAG00000016274	srl	99	82.675	Scophthalmus_maximus
ENSNGAG00000019741	Srl	94	85.068	ENSSDUG00000010808	srl	97	85.068	Seriola_dumerili
ENSNGAG00000019741	Srl	94	75.056	ENSSDUG00000009161	SRL	98	75.056	Seriola_dumerili
ENSNGAG00000019741	Srl	96	83.480	ENSSLDG00000022024	srl	97	83.480	Seriola_lalandi_dorsalis
ENSNGAG00000019741	Srl	94	74.617	ENSSLDG00000014601	SRL	99	73.961	Seriola_lalandi_dorsalis
ENSNGAG00000019741	Srl	96	90.044	ENSSPUG00000016859	SRL	99	90.044	Sphenodon_punctatus
ENSNGAG00000019741	Srl	100	82.203	ENSSPAG00000019105	srl	97	83.553	Stegastes_partitus
ENSNGAG00000019741	Srl	93	76.190	ENSSPAG00000014254	SRL	98	75.057	Stegastes_partitus
ENSNGAG00000019741	Srl	96	95.585	ENSSSCG00000007949	SRL	99	96.205	Sus_scrofa
ENSNGAG00000019741	Srl	96	89.231	ENSTGUG00000003951	-	99	89.800	Taeniopygia_guttata
ENSNGAG00000019741	Srl	77	92.265	ENSTGUG00000016121	-	96	93.103	Taeniopygia_guttata
ENSNGAG00000019741	Srl	89	75.656	ENSTRUG00000013310	SRL	55	75.418	Takifugu_rubripes
ENSNGAG00000019741	Srl	100	81.780	ENSTRUG00000006005	srl	97	82.819	Takifugu_rubripes
ENSNGAG00000019741	Srl	96	82.599	ENSTNIG00000009739	srl	97	82.599	Tetraodon_nigroviridis
ENSNGAG00000019741	Srl	96	97.124	ENSUAMG00000005701	SRL	56	97.124	Ursus_americanus
ENSNGAG00000019741	Srl	96	96.903	ENSUMAG00000002574	SRL	56	96.903	Ursus_maritimus
ENSNGAG00000019741	Srl	96	96.476	ENSVVUG00000016331	-	50	96.476	Vulpes_vulpes
ENSNGAG00000019741	Srl	96	89.159	ENSXETG00000017313	srl	100	89.159	Xenopus_tropicalis
ENSNGAG00000019741	Srl	89	85.273	ENSXCOG00000010424	srl	97	85.273	Xiphophorus_couchianus
ENSNGAG00000019741	Srl	96	76.053	ENSXCOG00000014584	SRL	100	74.945	Xiphophorus_couchianus
ENSNGAG00000019741	Srl	100	81.144	ENSXMAG00000004625	srl	92	82.819	Xiphophorus_maculatus
ENSNGAG00000019741	Srl	94	74.505	ENSXMAG00000027598	SRL	62	74.505	Xiphophorus_maculatus